XLOC_026554 (ighv7-1)


Basic Information

Item Value
gene id XLOC_026554
gene name ighv7-1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 34076378 ~ 34076807 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00051735
ATGATCTTTTCACCAGCTATTCTCCTGCTGATGGCAACAACATCCTgtGGTGTTTACTGTGTTGAGCTCACTCAACCTTCATCTATGGTTGTGAAACCTCAAGAATCATTTTCCATCTCCTGCAGGATTTCAGAATCAAGCTACTGCATTAACTGGATCCGTCAATCTGCTGGAAGACCGCTGGAATGGCTTGGATATCTCTGTAGTGGTGGTAGCACTAACATTAAAGATTCAGTGGAAAACAAGATCAGTTTCACCCAGGACACATCCAAAAACACAGTGTTTCTGCAGGGACGTAATTTTCAGACGGAAGACACAGCTGTGTATTACTGTGCCAGACAGA

Function

symbol description
ighv7-1 Predicted to enable antigen binding activity and immunoglobulin receptor binding activity. Predicted to be involved in several processes, including activation of immune response; defense response to other organism; and phagocytosis. Predicted to be part of immunoglobulin complex, circulating. Predicted to be active in external side of plasma membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096241

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00051735 True 343 mRNA 0.44 2 34076378 34076807

Neighbor

gene id symbol gene type direction distance location
XLOC_026552 ighv8-2 coding downstream 3932 34072012 ~ 34072446 (-)
XLOC_026551 ighv8-3 coding downstream 5927 34070022 ~ 34070451 (-)
XLOC_026550 ighv9-1 coding downstream 6741 34069166 ~ 34069637 (-)
XLOC_026549 ighv10-1 coding downstream 8334 34066951 ~ 34068044 (-)
XLOC_026548 ighv9-2 coding downstream 9830 34066113 ~ 34066548 (-)
XLOC_026555 ighv5-8 coding upstream 3763 34080570 ~ 34081023 (-)
XLOC_026556 ighv4-3 coding upstream 5044 34081851 ~ 34084387 (-)
XLOC_026557 ighv4-9 coding upstream 8054 34084861 ~ 34085336 (-)
XLOC_026558 BX649502.11 coding upstream 9234 34086041 ~ 34086483 (-)
XLOC_026559 ighv4-8 coding upstream 10141 34086948 ~ 34087394 (-)
XLOC_026547 BX649502.5 non-coding downstream 11442 34063955 ~ 34064936 (-)
XLOC_026544 BX649502.10 non-coding downstream 17661 34058679 ~ 34058717 (-)
XLOC_026539 BX649502.4 non-coding downstream 27725 34048205 ~ 34048653 (-)
XLOC_026538 BX649502.6 non-coding downstream 28762 34047179 ~ 34047616 (-)
XLOC_026534 BX649502.8 non-coding downstream 40747 34035192 ~ 34035631 (-)
XLOC_026572 NA non-coding upstream 62830 34139637 ~ 34141181 (-)
XLOC_026580 NA non-coding upstream 564241 34641048 ~ 34641973 (-)
XLOC_026585 NA non-coding upstream 870595 34947402 ~ 34948061 (-)
XLOC_026588 NA non-coding upstream 1488321 35565128 ~ 35574451 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) G171289 NA non-coding NW_025047681.1 JAEQBD010000026.1 5170197 ~ 5170636 (+)