XLOC_030509 (btg4)


Basic Information

Item Value
gene id XLOC_030509
gene name btg4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 57924611 ~ 57926693 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00059577
AAAAAGCTAAAAGATGTCAAAAACAACTGACTTTCTTTCCTGTGAAACTAACATGATTTTGCGTAGCTAAAGTAAAACAACCGAACACTATTTAAGCTGTCAAGTAGGAGTACAAGATAACCAGTTTGTTTGCTTTAATTGTAACTGaagttttaagacattttaatagttttttatatgtaaatatatattaaaaagcatTAGAAAAACAGTTTGTCCTATTGGCCCACAAAAATATAGTTGAAAATGAAGGAAGAAATTGCAGCCACAGTGTTTTTTATTGCAAGACTAGCAAAGAAGCATGGTAAACTGGATCGTGTTCGGAGAGAGAAGTTTGCTGTGGAACTAACTTCTGTACTCTTTGAAAATTACAAATGTCATTGGTACCCAGAAAACCCAACCAAAGGACAAGCATTTAGGTGTCTAAGGATGAACAGAGCTCAAACAAGAGACCCTGTTATTGAGCGTGCTTGTTGTCAGAGTGACATTGTATATGAATATCTTGGATTACCAAAGGAAATGACCATTTGGGTTGATCCGGGAGAGGTGTCATGCCGGTATGGTGAAAAGTCAACCCCATTTTGTGTTACTCAGTTTGAGGGACAAAAAAGAGACGGCGAGTTCTCTCGTAGGATAAACAATGCGGTAGAAAGGGCTTCATCTGATTATCATTCTGGAACCTCTTCTGATGAGGAGGGTGGAAACACTAGTATGAGCAGCACCTTGAGTAGTAGCAACAGTAGCAGTATTTCTGTTCCTGAGCCCAAATGCATCCCAACGGTCTCCAACCCAAACAGTGTCTACCAGTTCAGTGAGTTTGGGCAGCCACCTCCCATGCAAAGCTGGGGTACATACCCTAAAAGGAAGCCGTATGCTACCGAGGGctaccagcagcagcagcattctTATTCTTCAGGTGGGCCATATCAAGGCCACAAGAGTTTCAAGGGCTACAGGCCTTCCTATGCCTTCTCTGGTCCAAGGCAGGACCGATATCACTGGGTCAGCAAGAACCGCTCTTAGactttataaatgtgtatatatatattttaaatgtgttgttttgCTGAGCAGCTATGCAGGCAAGTGTTGAGTAACTTAATTTAAATGTAGTGCTTTAATTATTTATGGAGTCCTGTGTAAATGCCATAAGGGCAGTTTTTAGAAGTCTGTTTTAATCAATGGTTTATTTGTGGAGTACAAAAGACTTtctaaataaaatctgttttaataaAA

Function

symbol description
btg4 Predicted to be involved in negative regulation of cell population proliferation and negative regulation of mitotic cell cycle. Predicted to be active in cytoplasm and nucleus. Is expressed in ovary. Orthologous to human BTG4 (BTG anti-proliferation factor 4).

GO:

id name namespace
GO:0008285 negative regulation of cell population proliferation biological_process
GO:0045930 negative regulation of mitotic cell cycle biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-031008-1 Predicted to be involved in negative regulation of cell population proliferation and negative regulation of mitotic cell cycle. Predicted to be active in cytoplasm and nucleus. Is expressed in ovary. Orthologous to human BTG4 (BTG anti-proliferation factor 4).

Ensembl:

ensembl_id ENSDARG00000035171

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00059577 True 1236 mRNA 0.39 4 57924611 57926693

Neighbor

gene id symbol gene type direction distance location
XLOC_030508 ppp2r1ba coding upstream 126515 57773222 ~ 57798096 (+)
XLOC_030507 alg9 coding upstream 161432 57743815 ~ 57763179 (+)
XLOC_030506 fdxacb1 coding upstream 186275 57726425 ~ 57738336 (+)
XLOC_030505 ufc1 coding upstream 205761 57714902 ~ 57718850 (+)
XLOC_030504 bicdl2 coding upstream 253313 57658898 ~ 57671298 (+)
XLOC_030510 BX950179.1 coding downstream 111079 58037772 ~ 58037886 (+)
XLOC_030511 FQ378020.1 coding downstream 285468 58212161 ~ 58212284 (+)
XLOC_030512 nrgna coding downstream 445471 58372164 ~ 58382655 (+)
XLOC_030513 HEPACAM coding downstream 470953 58397646 ~ 58412538 (+)
XLOC_030514 NA coding downstream 489371 58416064 ~ 58421500 (+)
XLOC_030502 NA non-coding upstream 438997 57480014 ~ 57485614 (+)
XLOC_030498 NA non-coding upstream 683058 57238718 ~ 57241553 (+)
XLOC_030496 NA non-coding upstream 899111 57021588 ~ 57025500 (+)
XLOC_030494 NA non-coding upstream 1398918 56474610 ~ 56525693 (+)
XLOC_030493 NA non-coding upstream 1485942 56433652 ~ 56438669 (+)
XLOC_030525 NA non-coding downstream 1189176 59115869 ~ 59202263 (+)
XLOC_030530 NA non-coding downstream 1562627 59489320 ~ 59489621 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000059_02378547_02379613 BTG4 coding CI01000059 null 2376855 ~ 2379709 (+)