G1647604


Basic Information

Item Value
gene id G1647604
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 63592402 ~ 63593498 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1885237
cgggctctggctgggccactcaaggacattcagagacttgtcccgaagccactcctgcgttgtctcccagtcccttccgcagaaaaacatccccacagcatgatgctgccaccaccatgcttcactgtagggatggtgcctggtttcttccagatgtgatgcttggcattctggccagagagctcaatctttgtttcatcagcctttaactgaggattggcttccgtctggccactctatcatctgcagaaatgttttggtacccttcactgtcaactgtgggaccttatatagacaggtgtgtgcctttccaaatcatgtccaatcaatagaatttaccacaggtggactccaatcaagttgtagaaacatctcaaggatgatcaatggaaacaggatgcacctgagctcaaatttcgagtctcacagcaaagggtctgaatacttgtgtaaataaggtatttttgtttttataaaaacctgttttcattttgtcattgtgaggtattttgtcattgtgaggtattgtgtcattgtgaggtattgtgtcattgtggggtattgaggTATTGAGTCAatgtggggtattgagtcattgtggggtattgagtcattgtggggtattgagtcattgtggggtattgtgtcattgtggggtattgagccattgtggggtattgagtcattgtggggtattgaggTATTGAGTCAatgtggggtattgagtcattgtgggatattgagtcattgtggggtattgagccaatacatttaatccattttagaataaggctgtaacgttgcaaaatgtgggaaaactttccaaatgcactgtagcatGTACCTTCATAAATATGGTTTTGCCTTTCTGATCATGTCTTTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1885237 True 883 lncRNA 0.43 3 63592402 63593498

Neighbor

gene id symbol gene type direction distance location
plek2 plek2 coding upstream 26918 63557803 ~ 63565484 (+)
LOC110498294 LOC106599381 coding upstream 57699 63506786 ~ 63534703 (+)
fbln5 fbln5 coding upstream 92230 63435324 ~ 63500172 (+)
LOC110498409 LOC106592792 coding upstream 177820 63380908 ~ 63414582 (+)
rtf1 rtf1 coding upstream 220067 63348949 ~ 63372335 (+)
LOC110514319 rbm25 coding downstream 54871 63648369 ~ 63719010 (+)
ccdc177 LOC106586969 coding downstream 600011 64193509 ~ 64201734 (+)
LOC118941525 NA coding downstream 608722 64202220 ~ 64215617 (+)
LOC118941526 NA coding downstream 621788 64215286 ~ 64220569 (+)
LOC118941371 NA coding downstream 887929 64481427 ~ 64482263 (+)
G1647583 NA non-coding upstream 4630 63585020 ~ 63587772 (+)
G1647594 NA non-coding upstream 20487 63571221 ~ 63571915 (+)
G1647593 NA non-coding upstream 22061 63568727 ~ 63570341 (+)
G1647592 NA non-coding upstream 24439 63566993 ~ 63567963 (+)
G1647589 NA non-coding upstream 36295 63552841 ~ 63556107 (+)
G1647611 NA non-coding downstream 21732 63615230 ~ 63615645 (+)
G1647612 NA non-coding downstream 22160 63615658 ~ 63616031 (+)
G1647613 NA non-coding downstream 24288 63617786 ~ 63618153 (+)
G1647615 NA non-coding downstream 27223 63620721 ~ 63620997 (+)
G1647616 NA non-coding downstream 31220 63624718 ~ 63625075 (+)
G1647477 NA other upstream 388345 63202756 ~ 63204057 (+)
G1647411 NA other upstream 515259 63075149 ~ 63077143 (+)
G1647342 NA other upstream 573714 63016955 ~ 63018688 (+)
srsf5a LOC106611464 other upstream 1098683 62486921 ~ 62493719 (+)
G1648296 NA other downstream 534710 64128208 ~ 64129068 (+)
G1648608 NA other downstream 1386866 64980364 ~ 64980943 (+)
G1649268 NA other downstream 1868275 65461773 ~ 65463454 (+)
G1649291 NA other downstream 1950879 65544377 ~ 65545055 (+)
G1649309 NA other downstream 1984941 65578439 ~ 65582582 (+)

Expression


Co-expression Network