| Item | Value |
|---|---|
| gene id | XLOC_036001 |
| gene name | NA |
| gene type | non-coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007119.7 |
| NCBI id | CM002892.2 |
| chromosome length | 54304671 |
| location | 48731449 ~ 48746643 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| id | name | namespace |
|---|---|---|
| GO:0022402 | cell cycle process | biological_process |
| GO:0090304 | nucleic acid metabolic process | biological_process |
| GO:0006397 | mRNA processing | biological_process |
| GO:0006996 | organelle organization | biological_process |
| GO:0006139 | nucleobase-containing compound metabolic process | biological_process |
| GO:0006725 | cellular aromatic compound metabolic process | biological_process |
| GO:1901360 | organic cyclic compound metabolic process | biological_process |
| GO:0007049 | cell cycle | biological_process |
| GO:0051276 | chromosome organization | biological_process |
| GO:1903047 | mitotic cell cycle process | biological_process |
| GO:0034641 | cellular nitrogen compound metabolic process | biological_process |
| GO:0046483 | heterocycle metabolic process | biological_process |
| GO:0008380 | RNA splicing | biological_process |
| GO:0044422 | obsolete organelle part | cellular_component |
| GO:0044424 | obsolete intracellular part | cellular_component |
| GO:0044428 | obsolete nuclear part | cellular_component |
| GO:0070013 | intracellular organelle lumen | cellular_component |
| GO:0044446 | obsolete intracellular organelle part | cellular_component |
| GO:0032991 | protein-containing complex | cellular_component |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0005654 | nucleoplasm | cellular_component |
| GO:0031974 | membrane-enclosed lumen | cellular_component |
| GO:0031981 | nuclear lumen | cellular_component |
| GO:0043226 | organelle | cellular_component |
| GO:0043227 | membrane-bounded organelle | cellular_component |
| GO:0043229 | intracellular organelle | cellular_component |
| GO:0043231 | intracellular membrane-bounded organelle | cellular_component |
| GO:0043233 | organelle lumen | cellular_component |
| GO:0030234 | enzyme regulator activity | molecular_function |
| id | description |
|---|---|
| ko03230 | Viral genome structure |
| ko05164 | Influenza A |
| ko05169 | Epstein-Barr virus infection |
| ko03200 | Viral proteins |
| ensembl_id | ENSDARG00000104577 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00072281 | False | 15195 | lncRNA | 0.40 | 1 | 48731449 | 48746643 |
| TCONS_00070506 | True | 706 | processed_pseudogene | 0.46 | 1 | 48732153 | 48732858 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_036000 | BX323876.1 | coding | upstream | 38195 | 48691469 ~ 48693254 (+) |
| XLOC_035999 | nppa | coding | upstream | 113785 | 48613040 ~ 48617664 (+) |
| XLOC_035998 | nppb | coding | upstream | 120905 | 48609521 ~ 48610544 (+) |
| XLOC_035997 | nppal | coding | upstream | 127098 | 48603398 ~ 48604351 (+) |
| XLOC_035996 | si:ch211-215j19.12 | coding | upstream | 167033 | 48558100 ~ 48564416 (+) |
| XLOC_036002 | NA | coding | downstream | 3610 | 48750253 ~ 48752276 (+) |
| XLOC_036003 | tprg1l | coding | downstream | 54759 | 48801402 ~ 48809736 (+) |
| XLOC_036004 | tp73 | coding | downstream | 101557 | 48848200 ~ 48935476 (+) |
| XLOC_036005 | NA | coding | downstream | 163664 | 48910307 ~ 48910828 (+) |
| XLOC_036006 | rer1 | coding | downstream | 195827 | 48942470 ~ 48961405 (+) |
| XLOC_035995 | BX649478.1 | non-coding | upstream | 203903 | 48514551 ~ 48527546 (+) |
| XLOC_035993 | CABZ01070222.1 | non-coding | upstream | 340771 | 48390562 ~ 48390678 (+) |
| XLOC_035992 | NA | non-coding | upstream | 341314 | 48387572 ~ 48390135 (+) |
| XLOC_035991 | CR381598.1 | non-coding | upstream | 556026 | 48175308 ~ 48175423 (+) |
| XLOC_036008 | NA | non-coding | downstream | 314358 | 49061001 ~ 49063846 (+) |
| XLOC_036013 | NA | non-coding | downstream | 454669 | 49201312 ~ 49207469 (+) |
| XLOC_036014 | NA | non-coding | downstream | 475471 | 49222114 ~ 49231343 (+) |