XLOC_003852 (pbrm1)


Basic Information

Item Value
gene id XLOC_003852
gene name pbrm1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 3909756 ~ 3959889 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007397
gggttaattttttttcctctcgGTTTCTTAATAAATCAATCAACCTCCGTGTTGAATGTGTGTCAGCCCTCAGACAGCTCTCAGAGACAGCTGATCAGACACGGACGgCTCTTATGATGGGCTCAAAGCGCCGGAGAGCCACTTCTCCGTCCAGCAGTGTGAGTGGAGGAGATTTTGAGGACAGCCAATCCACATCCATATCTTCAACCAGTCGGAAGAGAAGAAGAATCGCAAACATTCCCACCGTTGACCCTATTGCGGTGTGTCATGAGTTGTACAACACTATCAGAGACTATAAGGATGACCAGGGCCGGATGCTGTGTGAACTCTTCATCAGAGCACCAAAGAGAAGGAATCAGCCAGATTACTATGACGTGGTGTCACAGCCCATTGATATGATGAAGATCCAGCAGAAGCTGAAGATGGAGGAGTATGACGATGTTGAGCAGCTCACAAGCGACTTTCAGCTCTTATTCAGTAATGCCAAGACATACTACAAACCTGAAACTCCAGAATACAGAGCAGCTTGTAAACTGTGGGATCTGTATATTCGGACCAAAAACGAGTTTGTGCAGCGAGGAGActatgatgaagatgatgatgatgacgacccACAGGAGAACCTCGGAGGAGCCACAGAGGAGGAGTCTATGTCGAGCCTTAAGGAAGTTCTTGGGATGCTTCTGGATGCTGTGTTGACCTACACTGAACACGGCCGCCTTATTAGCGAACTTTTCCAGAGACTTCCCTCTAAAATGCAATATCCAGATTATTATGCTATTATTAAAGAACCAATCGATCTGAAGAGCATCGCACACCGAATACAGATGTGCTACTATAAAAGTGTAAACCATATGGCTAAAGACATTGACTTGTTAGTCAAAAATGCCAAAACCTACAATGAACCCGGATCACAAGTGTTTAAAGATGCGAACACAATCAAGAAGGTCTTTGCGCAGAAAAAACTGGAGCTCGAACATTCTGAACCTATTAAATGCAGCATCAGGATCAGGAACAGAAGGTTTGCTCATGGAGACAGACTCTCCTGCATCACTACAGCTTTACAATATGGCTCCGAGAGTGAAGAGGATGCCATACTGACCGGCTCTGTTCATTACGATGAGGTCGAATCAGAGGCCGAGAGCATCCACTCCAGCATGGACGTGAGTAACCCGATCTTCCAGATGTATGAGGCGGTGCGGGGTGTCAGGAACAGTCAGGGGCAGCTCTTGGCCGAGCCCTTTTTCCAGCTGCCATCCCGGAAAGACTATCCCGACTACTTCCAGCAGATCAGCCATCCAGTCTCGCTCCAGCAGATACGGAGTAAGATGAAGAATAATGAGTATGAAAGTGTGGAGCAGATCGACACAGACCTGAACCGGATGTTTGAGAACGCCAAGCGCTACAACGTTCCCAGTTCTCAAATCTACAAACGTGTGCTGAAGCTGCAGCACATATTGCAGatgaagaGAAAAGAGCTGACGAGGAGAGATGATGAAGATGGCGACAGTAGGCTCTCGTCTACTCTGTCTGACGGCGGCAGCACCAAGCGCAAAAGCCATAAGAAGAACACAAAGAAGAATCGCATGAAGGCTCTGCTTGCTGCGGTGGCAGAGACTCGAGAGATGGGCACAGGCCGGAGACTCTGCGATCTCTTCATGGTCAAACCCTCCAAAAAAGACTATCCAGACTACTACAAGATCATCCTGGAGCCAATGGACATGAGGATCATAGAGCACAACATCCGCTCGGACAAGTACCCCAACGAGGACTCCATGATGGAGGACATGAAGCTGATGTTTCGTAACGCACGCCACTACAACGAAGAAGGCTCTCGCGTTTACAATGATGCCAACATTCTGGAGAAGATATTACGAGAAAAACGGAAGGAGCTCGGACCCCCGCCGGATGACGACGAGATCGTTTCACCCAAGCTAAAAATTAGGAAGAGTGGCATATCTCCAAAAAAGTCCAAGTATCTGACCCCTCTGCAACAGAAGCTCAATGAACTCTATGAAGCTGTGAAGAACTACACCGACAAGCGTGGACGGCGTCTGAGCACAATCTTCCTCCGTCTCCCGTCCCGTGCTGAGCTTCCAGATTACTACGTGGCCATCAAGAAGCCCATTGACATGGAGAAGATCAAGAGCCACATGCTGGCCAACAAGTACCAGGACGTAGACGCTCTGGTGGAAGACCTGGTGCTGATGTTCAACAACGCCTGCACCTACAATGAACCCGAATCGCTGATCTACAAAGATGCGTTGGTGCTTCACAAAGTGCTATTGGAGACCAGGAGAGACCTGGAAGGGGGCGATGATGCCCATGTCCCGGATGTTGCGCGGCTCATCCAGGAGCTCGTTCGCAATCTTTTCGTCTCGGTTCTTGGTCATCAAGATGACGAGGGACGATGTTATAGTGATTCACTAGCTGAGATTCCAGCAGTCGATCCCAACTGTTCTGATAAGACGCCGTTGAACTTTGAGATCATCAGGGCTAATGTGGATAAGGGCCGTTACAGGAGACTAGATGTGTTCCAGGACCAAATGTTTGAAGTTTTGGAGAAAGCCAGACGCCTGCACAGGACGGACTCTGAGATCTTTGAGGACTCTGTGGAGCTCCAGCAGTTCTTCATCCGCATCAGAGATGAGCTGTGTAAGAACGGAGAGATCCTGCTCACGCCGGCCCTCAGTTACACCATTAAACATCTGCACAGCGACGTGGAGAAGGAGAAGAAGGAGAAGCTGCCTAAAGAGTATGAGGAGGACAAACTCAAGAGAGAGGAGGAGAAGAAAGAGGCAGAAAAGAGCGAGGACACGGCGGGCGGAGGATGGCAGGGAGCCCTGCAGCGCAACTACAGCCAGGACTGCAGCTTTAAGGACAACATGTACCATGTGGGTGACTATGTGTATGTGGAGCCCACCGAACCGAACCTGCAGCCACACATCGTCTGCATAGAGCGCCTCTGGCAGGACGATGCAGGAGAGAACTGGCTTTATGGCTGCTGGTTCTACAGACCCAACGAAACATTTCACCTCGCTACACGCAAGTTCCTTGAGAAAGAGGTTTTCAAAAGCGACTATTACAACAAAATCCCTGTCAGTAAAATCCTGGGCAAATGCGTCGTCATGTTTGTAAAGGAGTATTTCAAACTTCAGCCTGACAGCTTTCGTCCTGAAGATGTTTTCGTTTGCGAGTCTCGCTATTCTGCCAAAACCAAGTCCTTCAAAAAGATCAAGATGTGGACGATGCCGCTGAGctcggtgaagtttgttcctcgtgAAGTGCCTTTGCCGGTGGTTCGTGTGGCCTCCATGTTTGCACCCAAACAGGAGAGTGAAAAGCCTCCTGAAGTGACCGAAGACGACAAGGCTTTACCATCTGTAATTGATAAGGAGAAAGAGGACATCACTTTGGAGGTGAATAATGGAGAACCGGGCTGCCAGTATTATGAGCAGCTCTGCTACAACAACATCTGGCTGAAAGTGGGAGACTGTGTCTACATCCGCTCTCATGGGCTCGTACGCAACCGCGTGGGCAGGATAGAGAAGATGTGGGTACGAGACGGCGCTGCCTATTTTTTCGGGCCCATTTTCATCCATCCTGAGGAGACCGAGCACGAACCGACCAAGATGTTCTACAAGAAGGAAGTGTTTCTCAGTAACCTGGAAGAATCATGCCCTATGACCTGTATCGGAGGGAAGTGTACAGTGTCTTCTTTCAAAGATTTCCTGTCATGCCGGCCGACTGAGATGCCGGAGGAGGACGTGTTGCTGTGTGAGAGCCGCTACATCGAGAGCGAGAAGCAAATGAAGAAGTTTAAAGGGCTGAAGCGTTTCTCTCTGTCCGCCAAAGTAGTGGAAGATGAAATCTATTACTTCAGAAAGCTCATCGTGCCTCAGAAGGAGCCGTCTCCACTGCTGGAAAAGAAGATCGAAGAGTTGGAAGCCAAGTTTGCGGACATGACGGATGAAGAGCTGGATGATTTGGGTGATGATGATGGAGACGGGTCTGATGCTCACTGTATGCCGCAGTTACAGACACAGCTGAGCGGAGACATGGACATGCTGCATTATGCTCCACAGCAGTCTGTGCCAAAGTCGATTAAGGGTCTTTCAAAGAAAGAGGGTGCGAAGAGGAAGATCAACATGAGTGGCTACATCCTCTTCAGCAGTGAGATGAGAGCTGTAATCAAGGCCCAGCACCCAGACTTCTCCTTCGGGGAGCTCAGCCGACTGGTGGGCACCGAGTGGAGGAACCTGGAGGCAACAAAGAAAGCTGAATATGAAGAGCGAGCAGCTAAAGTGGCGGAGCAGCAGGAGCGGGACAGAGCGCATCAGGGCTCCCCCAGAGCAGGTACTCCAGCAGGGCTGCTCATGGGTGTAGTTCCTCTTCCGACCCCCATGGGGCTGGTTCCTATGGCAGGCATGCTGGGTAGTTTCAGGCCACCCATGTTCACTTGTCAGGGGCCTGGCATGATTAACATGCCTCCACATCCCATGGGACTGCCTGCATTACCCCTAAACTTCCCGTGGGGTTTGCCTGGCATGCCGTTTCATGGTATGAATGGCATGGCTCCAGGTTCAACAGGGAGCGCTTACGGGACTCAGATGGGTGGGATGAACTCAGGCCAGCAGGTTCCTCCACCGTACCCAGGACAGGGTCAGGTTGGTCAGCCGGCTCACCAGCAGCCCTCCACCCCCATGTTTGTGGCTCCTCCACCAAAACCCCAGCGGTTGCTGCATTCAGAGGCCTACCTGAAGTATATTGAAGGACTCAGTGCTGAATCTACTACTGTCAGCAAGTGGGACCAAACACTCTCTGCTCGCAGGAAAGATGTGCGGCTGACGAAAGAGCAGGAGAGCCGTCTGCCGTCTCATTGGCTGAAGAGTAAAGGAGCTCACAAGACCATGGCGGACGCTCTGTGGCGACTGCGAGACCTGATGCTGCGGGACACACTAAACatccaacacacctacaacatcCACAATATCTGAAGCATTCCCCCCCTGACGAGCCCCTCTCTAGTGTTGTCATGTTGTGATTGGATAACGTTCTGTCTAGGATTTTGTAATGCTCTATTTTGTCTGTAGGCTTTGTTAGCGTCGATGTTTCTTGATAGCACTTTCAATTGGCTGATTTTCTATGTTGGCTATTAAATGTTCTTAGACcaatttaaacattttcataaaatgtttgacCGTAATGTTTGCGCGTTGTACTTTGTGACGGGATTGAGTTAGGACTGTTGTGAAAGAATGTACGAGATGGCCGTTTTTTGGGGTCTTGGTTCATAAAGTGGTATATGACACAAAGTTATAAGCCTATTTTTCATATCATCTGTTGTTTCAGCTATAATCATTTTGGAATGGACGCCATCTGTCTGTTGTTTCAATAAACTAACAGTGACAGA
>TCONS_00007398
gggatATCGAACTCTAGTTGGCTGACAACAACCGGGCCAGTACAAAAGTCCAGTTTTACCTATATAATGTGAAGGAACACTTGATATATCTTAccttcttttgtattttgtagcgTTTAGCGCATGATAAGCGCTTGCTCGCCTTCTTCAACTCTACAAAACAGACACGTGCGAGTTCCGTCAGCACACTTTACCTCATTTAACAGTGTTTTCACATCATTACAACAAGCAAAATTGCCCCACATAATGATTTACATCGTATATCCacgttttaaatgtataaatatagatTTGTTTCAGAATTAAACACTCACTCGGTCTCTTCATGTCTGCCGCAGCTCCAGCACGCGCTCACAGAACAGCAGCACGTGTCTCAACTCCTCACTTCCGCTTCCGCTCGTCGCGCCGCGAAgggttaattttttttcctctcgGTTTCTTAATAAATCAATCAACCTCCGTGTTGAATGTGTGTCAGCCCTCAGACAGCTCTCAGAGACAGCTGATCAGACACGGACGgCTCTTATGATGGGCTCAAAGCGCCGGAGAGCCACTTCTCCGTCCAGCAGTGTGAGTGGAGGAGATTTTGAGGACAGCCAATCCACATCCATATCTTCAACCAGTCGGAAGAGAAGAAGAATCGCAAACATTCCCACCGTTGACCCTATTGCGGTGTGTCATGAGTTGTACAACACTATCAGAGACTATAAGGATGACCAGGGCCGGATGCTGTGTGAACTCTTCATCAGAGCACCAAAGAGAAGGAATCAGCCAGATTACTATGACGTGGTGTCACAGCCCATTGATATGATGAAGATCCAGCAGAAGCTGAAGATGGAGGAGTATGACGATGTTGAGCAGCTCACAAGCGACTTTCAGCTCTTATTCAGTAATGCCAAGACATACTACAAACCTGAAACTCCAGAATACAGAGCAGCTTGTAAACTGTGGGATCTGTATATTCGGACCAAAAACGAGTTTGTGCAGCGAGGAGActatgatgaagatgatgatgatgacgacccACAGGAGAACCTCGGAGGAGCCACAGAGGAGGAGTCTATGTCGAGCCTTAAGGAAGTTCTTGGGATGCTTCTGGATGCTGTGTTGACCTACACTGAACACGGCCGCCTTATTAGCGAACTTTTCCAGAGACTTCCCTCTAAAATGCAATATCCAGATTATTATGCTATTATTAAAGAACCAATCGATCTGAAGAGCATCGCACACCGAATACAGATGTGCTACTATAAAAGTGTAAACCATATGGCTAAAGACATTGACTTGTTAGTCAAAAATGCCAAAACCTACAATGAACCCGGATCACAAGTGTTTAAAGATGCGAACACAATCAAGAAGGTCTTTGCGCAGAAAAAACTGGAGCTCGAACATTCTGAACCTATTAAATGCAGCATCAGGATCAGGAACAGAAGGTTTGCTCATGGAGACAGACTCTCCTGCATCACTACAGCTTTACAATATGGCTCCGAGAGTGAAGAGGATGCCATACTGACCGGCTCTGTTCATTACGATGAGGTCGAATCAGAGGCCGAGAGCATCCACTCCAGCATGGACGTGAGTAACCCGATCTTCCAGATGTATGAGGCGGTGCGGGGTGTCAGGAACAGTCAGGGGCAGCTCTTGGCCGAGCCCTTTTTCCAGCTGCCATCCCGGAAAGACTATCCCGACTACTTCCAGCAGATCAGCCATCCAGTCTCGCTCCAGCAGATACGGAGTAAGATGAAGAATAATGAGTATGAAAGTGTGGAGCAGATCGACACAGACCTGAACCGGATGTTTGAGAACGCCAAGCGCTACAACGTTCCCAGTTCTCAAATCTACAAACGTGTGCTGAAGCTGCAGCACATATTGCAGatgaagaGAAAAGAGCTGACGAGGAGAGATGATGAAGATGGCGACAGTAGGCTCTCGTCTACTCTGTCTGACGGCGGCAGCACCAAGCGCAAAAGCCATAAGAAGAACACAAAGAAGAATCGCATGAAGGCTCTGCTTGCTGCGGTGGCAGAGACTCGAGAGATGGGCACAGGCCGGAGACTCTGCGATCTCTTCATGGTCAAACCCTCCAAAAAAGACTATCCAGACTACTACAAGATCATCCTGGAGCCAATGGACATGAGGATCATAGAGCACAACATCCGCTCGGACAAGTACCCCAACGAGGACTCCATGATGGAGGACATGAAGCTGATGTTTCGTAACGCACGCCACTACAACGAAGAAGGCTCTCGCGTTTACAATGATGCCAACATTCTGGAGAAGATATTACGAGAAAAACGGAAGGAGCTCGGACCCCCGCCGGATGACGACGAGATCGTTTCACCCAAGCTAAAAATTAGGAAGAGTGGCATATCTCCAAAAAAGTCCAAGTATCTGACCCCTCTGCAACAGAAGCTCAATGAACTCTATGAAGCTGTGAAGAACTACACCGACAAGCGTGGACGGCGTCTGAGCACAATCTTCCTCCGTCTCCCGTCCCGTGCTGAGCTTCCAGATTACTACGTGGCCATCAAGAAGCCCATTGACATGGAGAAGATCAAGAGCCACATGCTGGCCAACAAGTACCAGGACGTAGACGCTCTGGTGGAAGACCTGGTGCTGATGTTCAACAACGCCTGCACCTACAATGAACCCGAATCGCTGATCTACAAAGATGCGTTGGTGCTTCACAAAGTGCTATTGGAGACCAGGAGAGACCTGGAAGGGGGCGATGATGCCCATGTCCCGGATGTTGCGCGGCTCATCCAGGAGCTCGTTCGCAATCTTTTCGTCTCGGTTCTTGGTCATCAAGATGACGAGGGACGATGTTATAGTGATTCACTAGCTGAGATTCCAGCAGTCGATCCCAACTGTTCTGATAAGACGCCGTTGAACTTTGAGATCATCAGGGCTAATGTGGATAAGGGCCGTTACAGGAGACTAGATGTGTTCCAGGACCAAATGTTTGAAGTTTTGGAGAAAGCCAGACGCCTGCACAGGACGGACTCTGAGATCTTTGAGGACTCTGTGGAGCTCCAGCAGTTCTTCATCCGCATCAGAGATGAGCTGTGTAAGAACGGAGAGATCCTGCTCACGCCGGCCCTCAGTTACACCATTAAACATCTGCACAGCGACGTGGAGAAGGAGAAGAAGGAGAAGCTGCCTAAAGAGTATGAGGAGGACAAACTCAAGAGAGAGGAGGAGAAGAAAGAGGCAGAAAAGAGCGAGGACACGGCGGGCGGAGGATGGCAGGGAGCCCTGCAGCGCAACTACAGCCAGGACTGCAGCTTTAAGGACAACATGTACCATGTGGGTGACTATGTGTATGTGGAGCCCACCGAACCGAACCTGCAGCCACACATCGTCTGCATAGAGCGCCTCTGGCAGGACGATGCAGGAGAGAACTGGCTTTATGGCTGCTGGTTCTACAGACCCAACGAAACATTTCACCTCGCTACACGCAAGTTCCTTGAGAAAGAGGTTTTCAAAAGCGACTATTACAACAAAATCCCTGTCAGTAAAATCCTGGGCAAATGCGTCGTCATGTTTGTAAAGGAGTATTTCAAACTTCAGCCTGACAGCTTTCGTCCTGAAGATGTTTTCGTTTGCGAGTCTCGCTATTCTGCCAAAACCAAGTCCTTCAAAAAGATCAAGATGTGGACGATGCCGCTGAGctcggtgaagtttgttcctcgtgAAGTGCCTTTGCCGGTGGTTCGTGTGGCCTCCATGTTTGCACCCAAACAGGAGAGTGAAAAGCCTCCTGAAGTGACCGAAGACGACAAGGCTTTACCATCTGTAATTGATAAGGAGAAAGAGGACATCACTTTGGAGGTGAATAATGGAGAACCGGGCTGCCAGTATTATGAGCAGCTCTGCTACAACAACATCTGGCTGAAAGTGGGAGACTGTGTCTACATCCGCTCTCATGGGCTCGTACGCAACCGCGTGGGCAGGATAGAGAAGATGTGGGTACGAGACGGCGCTGCCTATTTTTTCGGGCCCATTTTCATCCATCCTGAGGAGACCGAGCACGAACCGACCAAGATGTTCTACAAGAAGGAAGTGTTTCTCAGTAACCTGGAAGAATCATGCCCTATGACCTGTATCGGAGGGAAGTGTACAGTGTCTTCTTTCAAAGATTTCCTGTCATGCCGGCCGACTGAGATGCCGGAGGAGGACGTGTTGCTGTGTGAGAGCCGCTACATCGAGAGCGAGAAGCAAATGAAGAAGTTTAAAGGGCTGAAGCGTTTCTCTCTGTCCGCCAAAGTAGTGGAAGATGAAATCTATTACTTCAGAAAGCTCATCGTGCCTCAGAAGGAGCCGTCTCCACTGCTGGAAAAGAAGATCGAAGAGTTGGAAGCCAAGTTTGCGGACATGACGGATGAAGAGCTGGATGATTTGGGTGATGATGATGGAGACGGGTCTGATGCTCACTGTATGCCGCAGTTACAGACACAGCTGAGCGGAGACATGGACATGCTGCATTATGCTCCACAGCAGTCTGTGCCAAAGTCGATTAAGGGTCTTTCAAAGAAAGAGGGTGCGAAGAGGAAGATCAACATGAGTGGCTACATCCTCTTCAGCAGTGAGATGAGAGCTGTAATCAAGGCCCAGCACCCAGACTTCTCCTTCGGGGAGCTCAGCCGACTGGTGGGCACCGAGTGGAGGAACCTGGAGGCAACAAAGAAAGCTGAATATGAAGAGCGAGCAGCTAAAGTGGCGGAGCAGCAGGAGCGGGACAGAGCGCATCAGGGCTCCCCCAGAGCAGGCATGCTGGGTAGTTTCAGGCCACCCATGTTCACTTGTCAGGGGCCTGGCATGATTAACATGCCTCCACATCCCATGGGACTGCCTGCATTACCCCTAAACTTCCCGTGGGGTTTGCCTGGCATGCCGTTTCATGGTATGAATGGCATGGCTCCAGGTTCAACAGGGAGCGCTTACGGGACTCAGATGGGTGGGATGAACTCAGGCCAGCAGGTTCCTCCACCGTACCCAGGACAGGGTCAGGTTGGTCAGCCGGCTCACCAGCAGCCCTCCACCCCCATGTTTGTGGCTCCTCCACCAAAACCCCAGCGGTTGCTGCATTCAGAGGCCTACCTGAAGTATATTGAAGGACTCAGTGCTGAATCTACTACTGTCAGCAAGTGGGACCAAACACTCTCTGCTCGCAGGAAAGATGTGCGGCTGACGAAAGAGCAGGAGAGCCGTCTGCCGTCTCATTGGCTGAAGAGTAAAGGAGCTCACAAGACCATGGCGGACGCTCTGTGGCGACTGCGAGACCTGATGCTGCGGGACACACTAAACatccaacacacctacaacatcCACAATATCTGAAGCATTCCCCCCCTGACGAGCCCCTCTCTAGTGTTGTCATGTTGTGATTGGATAACGTTCTGTCTAGGATTTTGTAATGCTCTATTTTGTCTGTAGGCTTTGTTAGCGTCGATGTTTCTTGATAGCACTTTCAATTGGCTGATTTTCTATGTTGGCTATTAAATGTTCTTAGACcaatttaaacattttcataaaatgtttgacCGTAATGTTTGCGCGTTGTACTTTGTGACGGGATTGAGTTAGGACTGTTGTGAAAGAATGTACGAGATGGCCGTTTTTTGGGGTCTTGGTTCATAAAGTGGTATATGACACAAAGTTATAAGCCTATTTTTCATATCATCTGTTGTTTCAGCTATAATCATTTTGGAATGGACGCCATCTGTCTGTTGTTTCAATAAACTAACAGTGACAGA
>TCONS_00007399
ATGATGGGCTCAAAGCGCCGGAGAGCCACTTCTCCGTCCAGCAGTGTGAGTGGAGGAGATTTTGAGGACAGCCAATCCACATCCATATCTTCAACCAGTCGGAAGAGAAGAAGAATCGCAAACATTCCCACCGTTGACCCTATTGCGGTGTGTCATGAGTTGTACAACACTATCAGAGACTATAAGGATGACCAGGGCCGGATGCTGTGTGAACTCTTCATCAGAGCACCAAAGAGAAGGAATCAGCCAGATTACTATGACGTGGTGTCACAGCCCATTGATATGATGAAGATCCAGCAGAAGCTGAAGATGGAGGAGTATGACGATGTTGAGCAGCTCACAAGCGACTTTCAGCTCTTATTCAGTAATGCCAAGACATACTACAAACCTGAAACTCCAGAATACAGAGCAGCTTGTAAACTGTGGGATCTGTATATTCGGACCAAAAACGAGTTTGTGCAGCGAGGAGActatgatgaagatgatgatgatgacgacccACAGGAGAACCTCGGAGGAGCCACAGAGGAGGAGTCTATGTCGAGCCTTAAGGAAGTTCTTGGGATGCTTCTGGATGCTGTGTTGACCTACACTGAACACGGCCGCCTTATTAGCGAACTTTTCCAGAGACTTCCCTCTAAAATGCAATATCCAGATTATTATGCTATTATTAAAGAACCAATCGATCTGAAGAGCATCGCACACCGAATACAGATGTGCTACTATAAAAGTGTAAACCATATGGCTAAAGACATTGACTTGTTAGTCAAAAATGCCAAAACCTACAATGAACCCGGATCACAAGTGTTTAAAGATGCGAACACAATCAAGAAGGTCTTTGCGCAGAAAAAACTGGAGCTCGAACATTCTGAACCTATTAAATGCAGCATCAGGATCAGGAACAGAAGGTTTGCTCATGGAGACAGACTCTCCTGCATCACTACAGCTTTACAATATGGCTCCGAGAGTGAAGAGGATGCCATACTGACCGGCTCTGTTCATTACGATGAGGTCGAATCAGAGGCCGAGAGCATCCACTCCAGCATGGACGTGAGTAACCCGATCTTCCAGATGTATGAGGCGGTGCGGGGTGTCAGGAACAGTCAGGGGCAGCTCTTGGCCGAGCCCTTTTTCCAGCTGCCATCCCGGAAAGACTATCCCGACTACTTCCAGCAGATCAGCCATCCAGTCTCGCTCCAGCAGATACGGAGTAAGATGAAGAATAATGAGTATGAAAGTGTGGAGCAGATCGACACAGACCTGAACCGGATGTTTGAGAACGCCAAGCGCTACAACGTTCCCAGTTCTCAAATCTACAAACGTGTGCTGAAGCTGCAGCACATATTGCAGatgaagaGAAAAGAGCTGACGAGGAGAGATGATGAAGATGGCGACAGTAGGCTCTCGTCTACTCTGTCTGACGGCGGCAGCACCAAGCGCAAAAGCCATAAGAAGAACACAAAGAAGAATCGCATGAAGGCTCTGCTTGCTGCGGTGGCAGAGACTCGAGAGATGGGCACAGGCCGGAGACTCTGCGATCTCTTCATGGTCAAACCCTCCAAAAAAGACTATCCAGACTACTACAAGATCATCCTGGAGCCAATGGACATGAGGATCATAGAGCACAACATCCGCTCGGACAAGTACCCCAACGAGGACTCCATGATGGAGGACATGAAGCTGATGTTTCGTAACGCACGCCACTACAACGAAGAAGGCTCTCGCGTTTACAATGATGCCAACATTCTGGAGAAGATATTACGAGAAAAACGGAAGGAGCTCGGACCCCCGCCGGATGACGACGAGATCGTTTCACCCAAGCTAAAAATTAGGAAGAGTGGCATATCTCCAAAAAAGTCCAAGTATCTGACCCCTCTGCAACAGAAGCTCAATGAACTCTATGAAGCTGTGAAGAACTACACCGACAAGCGTGGACGGCGTCTGAGCACAATCTTCCTCCGTCTCCCGTCCCGTGCTGAGCTTCCAGATTACTACGTGGCCATCAAGAAGCCCATTGACATGGAGAAGATCAAGAGCCACATGCTGGCCAACAAGTACCAGGACGTAGACGCTCTGGTGGAAGACCTGGTGCTGATGTTCAACAACGCCTGCACCTACAATGAACCCGAATCGCTGATCTACAAAGATGCGTTGGTGCTTCACAAAGTGCTATTGGAGACCAGGAGAGACCTGGAAGGGGGCGATGATGCCCATGTCCCGGATGTTGCGCGGCTCATCCAGGAGCTCGTTCGCAATCTTTTCGTCTCGGTTCTTGGTCATCAAGATGACGAGGGACGATGTTATAGTGATTCACTAGCTGAGATTCCAGCAGTCGATCCCAACTGTTCTGATAAGACGCCGTTGAACTTTGAGATCATCAGGGCTAATGTGGATAAGGGCCGTTACAGGAGACTAGATGTGTTCCAGGACCAAATGTTTGAAGTTTTGGAGAAAGCCAGACGCCTGCACAGGACGGACTCTGAGATCTTTGAGGACTCTGTGGAGCTCCAGCAGTTCTTCATCCGCATCAGAGATGAGCTGTGTAAGAACGGAGAGATCCTGCTCACGCCGGCCCTCAGTTACACCATTAAACATCTGCACAGCGACGTGGAGAAGGAGAAGAAGGAGAAGCTGCCTAAAGAGTATGAGGAGGACAAACTCAAGAGAGAGGAGGAGAAGAAAGAGGCAGAAAAGAGCGAGGACACGGCGGGCGGAGGATGGCAGGGAGCCCTGCAGCGCAACTACAGCCAGGACTGCAGCTTTAAGGACAACATGTACCATGTGGGTGACTATGTGTATGTGGAGCCCACCGAACCGAACCTGCAGCCACACATCGTCTGCATAGAGCGCCTCTGGCAGGACGATGCAGGAGAGAACTGGCTTTATGGCTGCTGGTTCTACAGACCCAACGAAACATTTCACCTCGCTACACGCAAGTTCCTTGAGAAAGAGGTTTTCAAAAGCGACTATTACAACAAAATCCCTGTCAGTAAAATCCTGGGCAAATGCGTCGTCATGTTTGTAAAGGAGTATTTCAAACTTCAGCCTGACAGCTTTCGTCCTGAAGATGTTTTCGTTTGCGAGTCTCGCTATTCTGCCAAAACCAAGTCCTTCAAAAAGATCAAGATGTGGACGATGCCGCTGAGctcggtgaagtttgttcctcgtgAAGTGCCTTTGCCGGTGGTTCGTGTGGCCTCCATGTTTGCACCCAAACAGGAGAGTGAAAAGCCTCCTGAAGTGACCGAAGACGACAAGGCTTTACCATCTGTAATTGATAAGGAGAAAGAGGACATCACTTTGGAGGTGAATAATGGAGAACCGGGCTGCCAGTATTATGAGCAGCTCTGCTACAACAACATCTGGCTGAAAGTGGGAGACTGTGTCTACATCCGCTCTCATGGGCTCGTACGCAACCGCGTGGGCAGGATAGAGAAGATGTGGGTACGAGACGGCGCTGCCTATTTTTTCGGGCCCATTTTCATCCATCCTGAGGAGACCGAGCACGAACCGACCAAGATGTTCTACAAGAAGGAAGTGTTTCTCAGTAACCTGGAAGAATCATGCCCTATGACCTGTATCGGAGGGAAGTGTACAGTGTCTTCTTTCAAAGATTTCCTGTCATGCCGGCCGACTGAGATGCCGGAGGAGGACGTGTTGCTGTGTGAGAGCCGCTACATCGAGAGCGAGAAGCAAATGAAGAAGTTTAAAGGGCTGAAGCGTTTCTCTCTGTCCGCCAAAGTAGTGGAAGATGAAATCTATTACTTCAGAAAGCTCATCGTGCCTCAGAAGGAGCCGTCTCCACTGCTGGAAAAGAAGATCGAAGAGTTGGAAGCCAAGTTTGCGGACATGACGGATGAAGAGCTGGATGATTTGGGTGATGATGATGGAGACGGGTCTGATGCTCACTGTATGCCGCAGTTACAGACACAGCTGAGCGGAGACATGGACATGCTGCATTATGCTCCACAGCAGTCTGTGCCAAAGTCGATTAAGGGTCTTTCAAAGAAAGAGGGTGCGAAGAGGAAGATCAACATGAGTGGCTACATCCTCTTCAGCAGTGAGATGAGAGCTGTAATCAAGGCCCAGCACCCAGACTTCTCCTTCGGGGAGCTCAGCCGACTGGTGGGCACCGAGTGGAGGAACCTGGAGGCAACAAAGAAAGCTGAATATGAAGAGCGAGCAGCTAAAGTGGCGGAGCAGCAGGAGCGGGACAGAGCGCATCAGGGCTCCCCCAGAGCAGGTACTCCAGCAGGGCTGCTCATGGGTGTAGTTCCTCTTCCGACCCCCATGGGGCTGGTTCCTATGGCAGGCATGCTGGGTAGTTTCAGGCCACCCATGTTCACTTGTCAGGGGCCTGGCATGATTAACATGCCTCCACATCCCATGGGACTGCCTGCATTACCCCTAAACTTCCCGTGGGGTTTGCCTGGCATGCCGTTTCATGGTATGAATGGCATGGCTCCAGGTTCAACAGGGAGCGCTTACGGGACTCAGATGGGTGGGATGAACTCAGGCCAGCAGGTTCCTCCACCGTACCCAGGACAGGGTCAGGTTGGTCAGCCGGCTCACCAGCAGCCCTCCACCCCCATGTTTGTGGCTCCTCCACCAAAACCCCAGCGGTTGCTGCATTCAGAGGCCTACCTGAAGTATATTGAAGGACTCAGTGCTGAATCTACTACTGTCAGCAAGTGGGACCAAACACTCTCTGCTCGCAGGAAAGATGTGCGGCTGACGAAAGAGCAGGAGAGCCGTCTGCCGTCTCATTGGCTGAAGAGTAAAGGAGCTCACAAGACCATGGCGGACGCTCTGTGGCGACTGCGAGACCTGATGCTGCGGGACACACTAAACatccaacacacctacaacatcCACAATATCTGA

Function

symbol description
pbrm1 Predicted to enable DNA binding activity and chromatin binding activity. Predicted to act upstream of or within chromatin remodeling. Predicted to be located in nucleus. Predicted to be part of RSC-type complex. Is expressed in somite. Human ortholog(s) of this gene implicated in renal cell carcinoma. Orthologous to human PBRM1 (polybromo 1).

GO:

id name namespace
GO:0006338 chromatin remodeling biological_process
GO:0005634 nucleus cellular_component
GO:0016586 RSC-type complex cellular_component
GO:0003677 DNA binding molecular_function
GO:0003682 chromatin binding molecular_function

KEGG:

id description
ko05225 Hepatocellular carcinoma
ko03021 Transcription machinery
ko03036 Chromosome and associated proteins

ZFIN:

id description
ZDB-GENE-080926-4 Predicted to enable DNA binding activity and chromatin binding activity. Predicted to act upstream of or within chromatin remodeling. Predicted to be located in nucleus. Predicted to be part of RSC-type complex. Is expressed in somite. Human ortholog(s) of this gene implicated in renal cell carcinoma. Orthologous to human PBRM1 (polybromo 1).

Ensembl:

ensembl_id ENSDARG00000003877

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007397 False 5413 mRNA 0.50 30 3909756 3959477
TCONS_00007398 False 5756 mRNA 0.49 30 3909756 3959889
TCONS_00007399 True 4884 mRNA 0.51 29 3910172 3954691

Neighbor

gene id symbol gene type direction distance location
XLOC_003851 rpn1 coding downstream 1819 3892386 ~ 3907937 (-)
XLOC_003850 gata2a coding downstream 44284 3847442 ~ 3865472 (-)
XLOC_003849 itih1 coding downstream 262742 3630627 ~ 3647014 (-)
XLOC_003848 itih3a coding downstream 280540 3614326 ~ 3629216 (-)
XLOC_003847 dnajc16l coding downstream 296198 3593127 ~ 3613558 (-)
XLOC_003854 glt8d1 coding upstream 11827 3971716 ~ 3987885 (-)
XLOC_003855 nek4 coding upstream 32022 3991911 ~ 4024087 (-)
XLOC_003856 BX571768.1 coding upstream 78151 4038040 ~ 4137242 (-)
XLOC_003857 ccdc3b coding upstream 188919 4148808 ~ 4175773 (-)
XLOC_003858 BX248331.2 coding upstream 227133 4187022 ~ 4194697 (-)
XLOC_003938 BX324177.10 misc upstream 7378915 11338804 ~ 11339100 (-)
XLOC_003942 BX324177.17 misc upstream 7407705 11367594 ~ 11367890 (-)
XLOC_003943 BX324177.3 misc upstream 7410566 11370455 ~ 11370653 (-)
XLOC_003944 BX324177.4 misc upstream 7421015 11380904 ~ 11381204 (-)
XLOC_003945 BX324177.6 misc upstream 7423944 11383833 ~ 11384130 (-)
XLOC_003843 NA non-coding downstream 414792 3385104 ~ 3494964 (-)
XLOC_003838 NA non-coding downstream 927374 2976603 ~ 2982382 (-)
XLOC_003837 NA non-coding downstream 1065873 2842098 ~ 2843883 (-)
XLOC_003835 NA non-coding downstream 1149390 2756893 ~ 2760366 (-)
XLOC_003826 NA non-coding downstream 1461242 2446641 ~ 2448514 (-)
XLOC_003860 NA non-coding upstream 304159 4264048 ~ 4281694 (-)
XLOC_003862 BX248331.4 non-coding upstream 326741 4286630 ~ 4290096 (-)
XLOC_003864 CT033790.2 non-coding upstream 339202 4299091 ~ 4302567 (-)
XLOC_003865 NA non-coding upstream 349387 4309276 ~ 4350341 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000057_02656843_02688559 PBRM1 coding CI01000057 null 2656843 ~ 2689532 (-)
bowfin (Amia calva) AMCG00017171 pbrm1,LOC107699352,LOC107744848 coding CM030122.1 CM030122.1 49384611 ~ 49397912 (+)