G2078436


Basic Information

Item Value
gene id G2078436
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 36116810 ~ 36117035 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2376363
gtgtgcagagggtccctgatgtatgcagagggtccctgatgtatgcagagggtccctggttcgagcccaggttggggtgaggagagggacagaagcaacACTGTTGCATTGATGCTGTTAACCCGGATCACGGTTACTGTGGAAAAGAAGGAGGtcaaaggggggtgagtgtaaccggtgtgaaatggctagctagttagcggggtgcgtgctaatagcgtttcaa

Function

NR:

description
PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2376363 True 226 lncRNA 0.54 1 36116810 36117035

Neighbor

gene id symbol gene type direction distance location
LOC110507977 fzd4 coding upstream 104476 36005425 ~ 36012334 (+)
LOC110507976 LOC106581370 coding upstream 293926 35804534 ~ 35822884 (+)
LOC110507975 LOC106581363 coding upstream 597701 35465699 ~ 35519109 (+)
LOC110507973 LOC106581395 coding upstream 952351 35156006 ~ 35164459 (+)
gucy1a2 LOC106581392 coding upstream 1005768 35014631 ~ 35111042 (+)
naalad2 LOC106581411 coding downstream 248620 36365655 ~ 36381011 (+)
LOC110508005 LOC106613226 coding downstream 321190 36438225 ~ 36440709 (+)
LOC110507218 LOC106591049 coding downstream 336726 36453761 ~ 36546497 (+)
LOC118944683 NA coding downstream 493700 36610735 ~ 36618726 (+)
LOC118936607 LOC106581404 coding downstream 561738 36678773 ~ 36703523 (+)
G2078435 NA non-coding upstream 973 36114729 ~ 36115837 (+)
G2078434 NA non-coding upstream 2606 36113812 ~ 36114204 (+)
G2078433 NA non-coding upstream 3192 36113329 ~ 36113618 (+)
G2078432 NA non-coding upstream 3690 36112579 ~ 36113120 (+)
G2078429 NA non-coding upstream 7686 36108756 ~ 36109124 (+)
G2078438 NA non-coding downstream 2093 36119128 ~ 36119652 (+)
G2078440 NA non-coding downstream 3741 36120776 ~ 36121012 (+)
G2078442 NA non-coding downstream 20152 36137187 ~ 36137487 (+)
G2078424 LOC106581415 non-coding downstream 20628 36137663 ~ 36139822 (+)
G2078444 LOC106581415 non-coding downstream 25340 36142375 ~ 36151534 (+)
G2078425 NA other upstream 12709 36102874 ~ 36104101 (+)
G2078382 NA other upstream 82811 36033285 ~ 36033999 (+)
G2078296 NA other upstream 184301 35932115 ~ 35932509 (+)
G2078253 NA other upstream 245077 35870485 ~ 35871733 (+)
G2078188 NA other upstream 318820 35797572 ~ 35797990 (+)
G2078493 NA other downstream 183903 36263506 ~ 36302664 (+)
LOC110536894 NA other downstream 1156451 37031161 ~ 37276857 (+)
G2079197 NA other downstream 1162070 37279105 ~ 37280832 (+)
G2079468 LOC106581367 other downstream 1249704 37366739 ~ 37368136 (+)

Expression


Co-expression Network