G2079158


Basic Information

Item Value
gene id G2079158
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 37186691 ~ 37191837 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2377284
ACAACACCTCTACAGATCGTATCTAACTGAGCATTGAATTCCCTCAAGATGCAGAActaaataaatcatatttctccactcctgttctcAAATCCAAATTGTTcctacatttggtgtatcattttactgtAAGAAAATGCTTAATTCTGAGTTATTATTAATGCTAGAGCCATATTCGCATAtatatgtcatgtattgtcatgttgtgtcttgtttctgtcctttcctttcaccctgtctccctctgctggtcgtactaggttaccgtttctgtccctctttcccccagctgttccttgtcttctctgactacctcattcaccccttttcccacctgttccctttttccctctgattaggtccctatatctctctctgtttttgttcctgtccttgtcggattcttgtttgtgtgtctcatgcctgaaccagactatcatcgtgtttgctgcaaccttgtcctgtcctgtcggaatctacctgtccatctgagcccac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2377284 True 498 lncRNA 0.42 2 37186691 37191837

Neighbor

gene id symbol gene type direction distance location
LOC110507948 LOC106581405 coding upstream 322724 36707926 ~ 36863967 (+)
LOC118936607 LOC106581404 coding upstream 483168 36678773 ~ 36703523 (+)
LOC118944683 NA coding upstream 567965 36610735 ~ 36618726 (+)
LOC110507218 LOC106591049 coding upstream 640194 36453761 ~ 36546497 (+)
LOC110508005 LOC106613226 coding upstream 745982 36438225 ~ 36440709 (+)
mre11a mre11a coding downstream 126879 37318716 ~ 37357606 (+)
trnat-agu-151 NA coding downstream 313724 37505561 ~ 37505634 (+)
trnat-agu-152 NA coding downstream 313892 37505729 ~ 37505802 (+)
LOC110508012 LOC106581399 coding downstream 344692 37536529 ~ 37568873 (+)
LOC110508017 NA coding downstream 860796 38052633 ~ 38060113 (+)
G2079155 NA non-coding upstream 2859 37183493 ~ 37183832 (+)
G2079136 NA non-coding upstream 57662 37128819 ~ 37129029 (+)
G2079134 NA non-coding upstream 59251 37127211 ~ 37127440 (+)
G2079130 NA non-coding upstream 64339 37122148 ~ 37122352 (+)
G2079116 NA non-coding upstream 101117 37085274 ~ 37085574 (+)
G2079161 NA non-coding downstream 1994 37193831 ~ 37194120 (+)
G2079162 NA non-coding downstream 2551 37194388 ~ 37194647 (+)
G2079164 NA non-coding downstream 3911 37195748 ~ 37195971 (+)
G2079170 NA non-coding downstream 60924 37252761 ~ 37256313 (+)
G2079188 NA non-coding downstream 65207 37257044 ~ 37259124 (+)
G2078493 NA other upstream 884649 36263506 ~ 36302664 (+)
G2078425 NA other upstream 1082590 36102874 ~ 36104101 (+)
G2078382 NA other upstream 1152692 36033285 ~ 36033999 (+)
G2078296 NA other upstream 1254182 35932115 ~ 35932509 (+)
LOC110536894 NA other downstream 81649 37031161 ~ 37276857 (+)
G2079197 NA other downstream 87268 37279105 ~ 37280832 (+)
G2079468 LOC106581367 other downstream 174902 37366739 ~ 37368136 (+)
G2079657 NA other downstream 624041 37815848 ~ 37819286 (+)
G2080014 NA other downstream 753095 37944932 ~ 37945151 (+)

Expression


Co-expression Network