G2079170


Basic Information

Item Value
gene id G2079170
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 37252761 ~ 37256313 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2377298
ccctgtatatagctccacattgatctggtactggtactccctgtatatagctccacattgatttggtactggtacttcctgtatatagctccacattgatttggtactggtactccctgtatatagctccacattgatctggtactggtactccctgtatatagctccacattgatctggtacttcctgtatatatctccacattgatctggtactggtacttcctgtttatatctccacattgatctggtactggtactccctgtatatagctccacattgatctggtactggtactccctgtatatagctccacattgatctggtacttcttgtatatatctccacattgatctggtactggtacttcctgtatatagctccacattgatctggtactccctgtatatatctccacattggtctggtactggtacttcctgtatatatctccacattgatctggtactccctgtatatatctccacattgatctggtactggtacttcctgtatatatctccacattgatctggtactccctgtatatatctccacattgatctggtacttcctctATAATCAGTAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106612170, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2377298 True 589 lncRNA 0.41 3 37252761 37256313

Neighbor

gene id symbol gene type direction distance location
LOC110507948 LOC106581405 coding upstream 388794 36707926 ~ 36863967 (+)
LOC118936607 LOC106581404 coding upstream 549238 36678773 ~ 36703523 (+)
LOC118944683 NA coding upstream 634035 36610735 ~ 36618726 (+)
LOC110507218 LOC106591049 coding upstream 706264 36453761 ~ 36546497 (+)
LOC110508005 LOC106613226 coding upstream 812052 36438225 ~ 36440709 (+)
mre11a mre11a coding downstream 62403 37318716 ~ 37357606 (+)
trnat-agu-151 NA coding downstream 249248 37505561 ~ 37505634 (+)
trnat-agu-152 NA coding downstream 249416 37505729 ~ 37505802 (+)
LOC110508012 LOC106581399 coding downstream 280216 37536529 ~ 37568873 (+)
LOC110508017 NA coding downstream 796320 38052633 ~ 38060113 (+)
G2079164 NA non-coding upstream 56790 37195748 ~ 37195971 (+)
G2079162 NA non-coding upstream 58114 37194388 ~ 37194647 (+)
G2079161 NA non-coding upstream 58641 37193831 ~ 37194120 (+)
G2079158 NA non-coding upstream 60924 37186691 ~ 37191837 (+)
G2079155 NA non-coding upstream 68929 37183493 ~ 37183832 (+)
G2079188 NA non-coding downstream 731 37257044 ~ 37259124 (+)
G2079194 NA non-coding downstream 21396 37277709 ~ 37278966 (+)
G2079207 NA non-coding downstream 50982 37307295 ~ 37307932 (+)
G2079213 NA non-coding downstream 65256 37321569 ~ 37323327 (+)
G2079457 NA non-coding downstream 104241 37360554 ~ 37360820 (+)
G2078493 NA other upstream 950719 36263506 ~ 36302664 (+)
G2078425 NA other upstream 1148660 36102874 ~ 36104101 (+)
G2078382 NA other upstream 1218762 36033285 ~ 36033999 (+)
G2078296 NA other upstream 1320252 35932115 ~ 35932509 (+)
LOC110536894 NA other downstream 17173 37031161 ~ 37276857 (+)
G2079197 NA other downstream 22792 37279105 ~ 37280832 (+)
G2079468 LOC106581367 other downstream 110426 37366739 ~ 37368136 (+)
G2079657 NA other downstream 559565 37815848 ~ 37819286 (+)
G2080014 NA other downstream 688619 37944932 ~ 37945151 (+)

Expression


Co-expression Network