G2079457


Basic Information

Item Value
gene id G2079457
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 37360554 ~ 37360820 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2377699
ccgagtcatggctgaacgacgacatgaattacatacagctggcaggtttTACGCTGCTTTGGCAAGACGGAACAgctgcctctggtaagacaaggggtttgtaaacaacagctggtgcacaaaatctaatagtATGGAAGTgtcgaggttttgctcgcctgaggtagagtatctcatgataagctgtagaccacactatctacctagagagttttcaactgtatttttcatagctgtcaacataccaccacagaccgatgctggcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2377699 True 267 lncRNA 0.46 1 37360554 37360820

Neighbor

gene id symbol gene type direction distance location
mre11a mre11a coding upstream 2948 37318716 ~ 37357606 (+)
LOC110536894 NA coding upstream 85472 37031161 ~ 37276857 (+)
LOC110507948 LOC106581405 coding upstream 496587 36707926 ~ 36863967 (+)
LOC118936607 LOC106581404 coding upstream 657031 36678773 ~ 36703523 (+)
LOC118944683 NA coding upstream 741828 36610735 ~ 36618726 (+)
trnat-agu-151 NA coding downstream 144741 37505561 ~ 37505634 (+)
trnat-agu-152 NA coding downstream 144909 37505729 ~ 37505802 (+)
LOC110508012 LOC106581399 coding downstream 175709 37536529 ~ 37568873 (+)
LOC110508017 NA coding downstream 691813 38052633 ~ 38060113 (+)
LOC110507217 NA coding downstream 1109098 38469918 ~ 38474599 (+)
G2079213 NA non-coding upstream 37227 37321569 ~ 37323327 (+)
G2079207 NA non-coding upstream 52622 37307295 ~ 37307932 (+)
G2079194 NA non-coding upstream 81588 37277709 ~ 37278966 (+)
G2079188 NA non-coding upstream 101430 37257044 ~ 37259124 (+)
G2079170 NA non-coding upstream 104241 37252761 ~ 37256313 (+)
G2079458 NA non-coding downstream 119 37360939 ~ 37361300 (+)
G2079459 NA non-coding downstream 761 37361581 ~ 37361858 (+)
G2079462 NA non-coding downstream 2457 37363277 ~ 37364384 (+)
G2079465 NA non-coding downstream 4844 37365664 ~ 37365907 (+)
G2079469 NA non-coding downstream 8039 37368859 ~ 37369736 (+)
G2079197 NA other upstream 79722 37279105 ~ 37280832 (+)
LOC110508005 LOC106613226 other upstream 921200 36438225 ~ 36440709 (+)
G2078493 NA other upstream 1058512 36263506 ~ 36302664 (+)
G2078425 NA other upstream 1256453 36102874 ~ 36104101 (+)
G2079468 LOC106581367 other downstream 5919 37366739 ~ 37368136 (+)
G2079657 NA other downstream 455058 37815848 ~ 37819286 (+)
G2080014 NA other downstream 584112 37944932 ~ 37945151 (+)
G2081884 LOC106581433 other downstream 2466838 39827658 ~ 39837383 (+)
LOC110507223 LOC106613251 other downstream 2534847 39781189 ~ 39938079 (+)

Expression


Co-expression Network