G2079458


Basic Information

Item Value
gene id G2079458
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 37360939 ~ 37361300 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2377700
CATTTATGTCAAcacgttaaatgtgcaaccagacgGAAAAAAAATcctctagatcacctgtactccacacacagatgcttacaaagctctcccttgccctccatttagcaaatctgatcataattctatcctcctgtttCATGCTAACAAGCAAAAAttcaagcaggaagcaccagtgactcggtcaataaaaaagtggtgagatgaagcagatgctaagctacaggactgttttgctaccacagactggaatatgttccgggattcttccgatggcattgaggagtacaccacatcagtcactggcttcatcaataagtgcatcgatgatgtcattcccacagtgactgtacgtacatacc

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: dynein heavy chain 3, axonemal, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2377700 True 362 lncRNA 0.43 1 37360939 37361300

Neighbor

gene id symbol gene type direction distance location
mre11a mre11a coding upstream 3333 37318716 ~ 37357606 (+)
LOC110536894 NA coding upstream 85857 37031161 ~ 37276857 (+)
LOC110507948 LOC106581405 coding upstream 496972 36707926 ~ 36863967 (+)
LOC118936607 LOC106581404 coding upstream 657416 36678773 ~ 36703523 (+)
LOC118944683 NA coding upstream 742213 36610735 ~ 36618726 (+)
trnat-agu-151 NA coding downstream 144261 37505561 ~ 37505634 (+)
trnat-agu-152 NA coding downstream 144429 37505729 ~ 37505802 (+)
LOC110508012 LOC106581399 coding downstream 175229 37536529 ~ 37568873 (+)
LOC110508017 NA coding downstream 691333 38052633 ~ 38060113 (+)
LOC110507217 NA coding downstream 1108618 38469918 ~ 38474599 (+)
G2079457 NA non-coding upstream 119 37360554 ~ 37360820 (+)
G2079213 NA non-coding upstream 37612 37321569 ~ 37323327 (+)
G2079207 NA non-coding upstream 53007 37307295 ~ 37307932 (+)
G2079194 NA non-coding upstream 81973 37277709 ~ 37278966 (+)
G2079188 NA non-coding upstream 101815 37257044 ~ 37259124 (+)
G2079459 NA non-coding downstream 281 37361581 ~ 37361858 (+)
G2079462 NA non-coding downstream 1977 37363277 ~ 37364384 (+)
G2079465 NA non-coding downstream 4364 37365664 ~ 37365907 (+)
G2079469 NA non-coding downstream 7559 37368859 ~ 37369736 (+)
G2079563 NA non-coding downstream 183245 37544545 ~ 37546090 (+)
G2079197 NA other upstream 80107 37279105 ~ 37280832 (+)
LOC110508005 LOC106613226 other upstream 921585 36438225 ~ 36440709 (+)
G2078493 NA other upstream 1058897 36263506 ~ 36302664 (+)
G2078425 NA other upstream 1256838 36102874 ~ 36104101 (+)
G2079468 LOC106581367 other downstream 5439 37366739 ~ 37368136 (+)
G2079657 NA other downstream 454578 37815848 ~ 37819286 (+)
G2080014 NA other downstream 583632 37944932 ~ 37945151 (+)
G2081884 LOC106581433 other downstream 2466358 39827658 ~ 39837383 (+)
LOC110507223 LOC106613251 other downstream 2534367 39781189 ~ 39938079 (+)

Expression


Co-expression Network