G2079563


Basic Information

Item Value
gene id G2079563
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 37544545 ~ 37546090 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2377823
AAATACTGAGTGGGTCATAGCTAAATACTGAGTGGGTCATAGCTAAATACTGAGTGGGTCATAGCTAAATACTGAGTGGGTCATAGCTAAATACTGAGCAGGCCATAGCTAAATACTGAGTGGGTCATAGCTAAATACTGAGTGGGTCATAGCTAAATACTGAGTGGGTCATAGCTAAATACTGAGCAGGCCATAGCTAAATACTGAGTGGGTCATAGCTAAATACTGAGTGGGTCATAGCTAAATACTGAGTGGGTCATAGCTAAATACTGAGCAGGCCATAGCTAAATACTGAGTGGGTCATAGCTAAATACTGAACAGGCCATAGCTAAATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2377823 True 336 lncRNA 0.41 2 37544545 37546090

Neighbor

gene id symbol gene type direction distance location
trnat-agu-152 NA coding upstream 38743 37505729 ~ 37505802 (+)
trnat-agu-151 NA coding upstream 38911 37505561 ~ 37505634 (+)
mre11a mre11a coding upstream 186939 37318716 ~ 37357606 (+)
LOC110536894 NA coding upstream 269463 37031161 ~ 37276857 (+)
LOC110507948 LOC106581405 coding upstream 680578 36707926 ~ 36863967 (+)
LOC110508017 NA coding downstream 506543 38052633 ~ 38060113 (+)
LOC110507217 NA coding downstream 923828 38469918 ~ 38474599 (+)
LOC110508002 LOC106581401 coding downstream 1073460 38619550 ~ 38628170 (+)
LOC118944799 NA coding downstream 1493483 39039573 ~ 39039625 (+)
LOC110508028 neus coding downstream 2121899 39667989 ~ 39681560 (+)
G2079469 NA non-coding upstream 174809 37368859 ~ 37369736 (+)
G2079465 NA non-coding upstream 178638 37365664 ~ 37365907 (+)
G2079462 NA non-coding upstream 180161 37363277 ~ 37364384 (+)
G2079459 NA non-coding upstream 182687 37361581 ~ 37361858 (+)
G2079458 NA non-coding upstream 183245 37360939 ~ 37361300 (+)
G2079600 NA non-coding downstream 81731 37627821 ~ 37631175 (+)
G2079606 NA non-coding downstream 92796 37638886 ~ 37639112 (+)
G2079607 NA non-coding downstream 107709 37653799 ~ 37654022 (+)
G2079608 NA non-coding downstream 109438 37655528 ~ 37684763 (+)
G2079610 NA non-coding downstream 113497 37659587 ~ 37660543 (+)
G2079468 LOC106581367 other upstream 176409 37366739 ~ 37368136 (+)
G2079197 NA other upstream 263713 37279105 ~ 37280832 (+)
LOC110508005 LOC106613226 other upstream 1105191 36438225 ~ 36440709 (+)
G2078493 NA other upstream 1242503 36263506 ~ 36302664 (+)
G2079657 NA other downstream 269788 37815848 ~ 37819286 (+)
G2080014 NA other downstream 398842 37944932 ~ 37945151 (+)
G2081884 LOC106581433 other downstream 2281568 39827658 ~ 39837383 (+)
LOC110507223 LOC106613251 other downstream 2349577 39781189 ~ 39938079 (+)
G2081949 NA other downstream 2385784 39931874 ~ 39933835 (+)

Expression


Co-expression Network