G2079469


Basic Information

Item Value
gene id G2079469
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 37368859 ~ 37369736 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2377713
CTGTAGAGATATGATGTAGTGTAGAGATATGATGTACTGTAGAGATATgatgtagtgtagagatacgatgtagtgtagagatatgatgtagtgtagagatatgatgtagtgtagagatatgatgtagtgtagagatatgatgtagtgtagagatacgatgtagtgtagagatacgATGTAGTGTAGCGATACGATGTAGTGTAGAGATAGGATTTAGTGTAGAGATATGATGTAGTGTAGAGATATGATGTAGTGTAAAGATATGATTTAGTGTAGATATATGATGTACTGTAGAGATATgatgtagtgtagagatacgatgtagtgtagagatacgatgtagtgtagagATgatgtagtgtagagatacgatgtagtgtagagatacgatgtagtgtagagatacgA

Function

NR:

description
PREDICTED: extensin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2377713 True 408 lncRNA 0.35 2 37368859 37369736

Neighbor

gene id symbol gene type direction distance location
mre11a mre11a coding upstream 11253 37318716 ~ 37357606 (+)
LOC110536894 NA coding upstream 93777 37031161 ~ 37276857 (+)
LOC110507948 LOC106581405 coding upstream 504892 36707926 ~ 36863967 (+)
LOC118936607 LOC106581404 coding upstream 665336 36678773 ~ 36703523 (+)
LOC118944683 NA coding upstream 750133 36610735 ~ 36618726 (+)
trnat-agu-151 NA coding downstream 135825 37505561 ~ 37505634 (+)
trnat-agu-152 NA coding downstream 135993 37505729 ~ 37505802 (+)
LOC110508012 LOC106581399 coding downstream 166793 37536529 ~ 37568873 (+)
LOC110508017 NA coding downstream 682897 38052633 ~ 38060113 (+)
LOC110507217 NA coding downstream 1100182 38469918 ~ 38474599 (+)
G2079465 NA non-coding upstream 2952 37365664 ~ 37365907 (+)
G2079462 NA non-coding upstream 4475 37363277 ~ 37364384 (+)
G2079459 NA non-coding upstream 7001 37361581 ~ 37361858 (+)
G2079458 NA non-coding upstream 7559 37360939 ~ 37361300 (+)
G2079457 NA non-coding upstream 8039 37360554 ~ 37360820 (+)
G2079563 NA non-coding downstream 174809 37544545 ~ 37546090 (+)
G2079600 NA non-coding downstream 258085 37627821 ~ 37631175 (+)
G2079606 NA non-coding downstream 269150 37638886 ~ 37639112 (+)
G2079607 NA non-coding downstream 284063 37653799 ~ 37654022 (+)
G2079608 NA non-coding downstream 285792 37655528 ~ 37684763 (+)
G2079468 LOC106581367 other upstream 723 37366739 ~ 37368136 (+)
G2079197 NA other upstream 88027 37279105 ~ 37280832 (+)
LOC110508005 LOC106613226 other upstream 929505 36438225 ~ 36440709 (+)
G2078493 NA other upstream 1066817 36263506 ~ 36302664 (+)
G2079657 NA other downstream 446142 37815848 ~ 37819286 (+)
G2080014 NA other downstream 575196 37944932 ~ 37945151 (+)
G2081884 LOC106581433 other downstream 2457922 39827658 ~ 39837383 (+)
LOC110507223 LOC106613251 other downstream 2525931 39781189 ~ 39938079 (+)
G2081949 NA other downstream 2562138 39931874 ~ 39933835 (+)

Expression


Co-expression Network