G2079459


Basic Information

Item Value
gene id G2079459
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 37361581 ~ 37361858 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2377701
aaataacttatATACTTGCTTCCacaggcaagtaacactgaaacatgcatgagaggatcagctgttccagacgactgtgtgatcaggcTCTTcgcagccgatgtaagaccttggaacaggccgcagggccagacggattaccaggccctgtactctgagcatgcgccgaccaactggcaagtgtcttcactgacattttcaacctctccctgtctgagtctgtaataccaacatgtttcaagcagaccaccatagtccctgtgcccaagaacactaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2377701 True 278 lncRNA 0.50 1 37361581 37361858

Neighbor

gene id symbol gene type direction distance location
mre11a mre11a coding upstream 3975 37318716 ~ 37357606 (+)
LOC110536894 NA coding upstream 86499 37031161 ~ 37276857 (+)
LOC110507948 LOC106581405 coding upstream 497614 36707926 ~ 36863967 (+)
LOC118936607 LOC106581404 coding upstream 658058 36678773 ~ 36703523 (+)
LOC118944683 NA coding upstream 742855 36610735 ~ 36618726 (+)
trnat-agu-151 NA coding downstream 143703 37505561 ~ 37505634 (+)
trnat-agu-152 NA coding downstream 143871 37505729 ~ 37505802 (+)
LOC110508012 LOC106581399 coding downstream 174671 37536529 ~ 37568873 (+)
LOC110508017 NA coding downstream 690775 38052633 ~ 38060113 (+)
LOC110507217 NA coding downstream 1108060 38469918 ~ 38474599 (+)
G2079458 NA non-coding upstream 281 37360939 ~ 37361300 (+)
G2079457 NA non-coding upstream 761 37360554 ~ 37360820 (+)
G2079213 NA non-coding upstream 38254 37321569 ~ 37323327 (+)
G2079207 NA non-coding upstream 53649 37307295 ~ 37307932 (+)
G2079194 NA non-coding upstream 82615 37277709 ~ 37278966 (+)
G2079462 NA non-coding downstream 1419 37363277 ~ 37364384 (+)
G2079465 NA non-coding downstream 3806 37365664 ~ 37365907 (+)
G2079469 NA non-coding downstream 7001 37368859 ~ 37369736 (+)
G2079563 NA non-coding downstream 182687 37544545 ~ 37546090 (+)
G2079600 NA non-coding downstream 265963 37627821 ~ 37631175 (+)
G2079197 NA other upstream 80749 37279105 ~ 37280832 (+)
LOC110508005 LOC106613226 other upstream 922227 36438225 ~ 36440709 (+)
G2078493 NA other upstream 1059539 36263506 ~ 36302664 (+)
G2078425 NA other upstream 1257480 36102874 ~ 36104101 (+)
G2079468 LOC106581367 other downstream 4881 37366739 ~ 37368136 (+)
G2079657 NA other downstream 454020 37815848 ~ 37819286 (+)
G2080014 NA other downstream 583074 37944932 ~ 37945151 (+)
G2081884 LOC106581433 other downstream 2465800 39827658 ~ 39837383 (+)
LOC110507223 LOC106613251 other downstream 2533809 39781189 ~ 39938079 (+)

Expression


Co-expression Network