G2079161


Basic Information

Item Value
gene id G2079161
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 37193831 ~ 37194120 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2377287
ggtcggattcgcgtttatcgtcgaaggaatgagcgttacaacgaggcctgtactctggagcaggatcaatTTGTTGGTGGagtgtccgtcatggtctggggtggtgtgtcacagcatcatcagactgagcttgttgttattgcaggcaatctcaactctgtgcgttacagggaagacatcctcctccctcatgtggtacccttcctgcaggctcattctgacatgaccctccagcatgacaatgtcaccagccatactgcttgttctgtgcgtgatttcttgcaagtcag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2377287 True 290 lncRNA 0.51 1 37193831 37194120

Neighbor

gene id symbol gene type direction distance location
LOC110507948 LOC106581405 coding upstream 329864 36707926 ~ 36863967 (+)
LOC118936607 LOC106581404 coding upstream 490308 36678773 ~ 36703523 (+)
LOC118944683 NA coding upstream 575105 36610735 ~ 36618726 (+)
LOC110507218 LOC106591049 coding upstream 647334 36453761 ~ 36546497 (+)
LOC110508005 LOC106613226 coding upstream 753122 36438225 ~ 36440709 (+)
mre11a mre11a coding downstream 124596 37318716 ~ 37357606 (+)
trnat-agu-151 NA coding downstream 311441 37505561 ~ 37505634 (+)
trnat-agu-152 NA coding downstream 311609 37505729 ~ 37505802 (+)
LOC110508012 LOC106581399 coding downstream 342409 37536529 ~ 37568873 (+)
LOC110508017 NA coding downstream 858513 38052633 ~ 38060113 (+)
G2079158 NA non-coding upstream 1994 37186691 ~ 37191837 (+)
G2079155 NA non-coding upstream 9999 37183493 ~ 37183832 (+)
G2079136 NA non-coding upstream 64802 37128819 ~ 37129029 (+)
G2079134 NA non-coding upstream 66391 37127211 ~ 37127440 (+)
G2079130 NA non-coding upstream 71479 37122148 ~ 37122352 (+)
G2079162 NA non-coding downstream 268 37194388 ~ 37194647 (+)
G2079164 NA non-coding downstream 1628 37195748 ~ 37195971 (+)
G2079170 NA non-coding downstream 58641 37252761 ~ 37256313 (+)
G2079188 NA non-coding downstream 62924 37257044 ~ 37259124 (+)
G2079194 NA non-coding downstream 83589 37277709 ~ 37278966 (+)
G2078493 NA other upstream 891789 36263506 ~ 36302664 (+)
G2078425 NA other upstream 1089730 36102874 ~ 36104101 (+)
G2078382 NA other upstream 1159832 36033285 ~ 36033999 (+)
G2078296 NA other upstream 1261322 35932115 ~ 35932509 (+)
LOC110536894 NA other downstream 79366 37031161 ~ 37276857 (+)
G2079197 NA other downstream 84985 37279105 ~ 37280832 (+)
G2079468 LOC106581367 other downstream 172619 37366739 ~ 37368136 (+)
G2079657 NA other downstream 621758 37815848 ~ 37819286 (+)
G2080014 NA other downstream 750812 37944932 ~ 37945151 (+)

Expression


Co-expression Network