G152415


Basic Information

Item Value
gene id G152415
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 6149265 ~ 6149583 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU206483
atgggagaaaaatgtgctctggtttattggcatgtctttaaaccaatcacaatcgtcttgggcggtgctaagcaccggacggagccacggtgctgctgcaaaatagcctcgggaaggaacttgttttggtggaagattTGCTCGttcaaagtagttttagtcgtgcaacagaaaattcaggacagatagtctagctagctgtctggatttaccctgcagagatctgaggagcatttaaccagagtcctctaaatccactggagtttaaaattccaacacaaagaaagcgtaagcTAACGGACATCTGgacgaaaagaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU206483 True 319 lncRNA 0.45 1 6149265 6149583

Neighbor

gene id symbol gene type direction distance location
pdgfbb NA coding upstream 1136 6134660 ~ 6148129 (+)
tmem150b NA coding upstream 49038 6095139 ~ 6100227 (+)
adsl adsl coding upstream 55539 6082777 ~ 6093726 (+)
atf4b NA coding upstream 77333 6068936 ~ 6071932 (+)
LOC120575492 NA coding upstream 80519 6055758 ~ 6068746 (+)
pvalb6 LOC107087166,LOC104944083,LOC103371237,LOC105933549,LOC103147389,LOC100701083 coding downstream 32809 6182392 ~ 6228086 (+)
cbx6b LOC103371236,LOC102794254,LOC102311669 coding downstream 101787 6251370 ~ 6261682 (+)
LOC120573897 LOC100708249 coding downstream 133165 6282748 ~ 6295167 (+)
sp100.1 NA coding downstream 147074 6296657 ~ 6309954 (+)
LOC120574777 NA coding downstream 163185 6312768 ~ 6321289 (+)
G152387 NA non-coding upstream 55050 6093919 ~ 6094215 (+)
G152350 NA non-coding upstream 131794 6017217 ~ 6017471 (+)
G152336 LOC102224681,LOC103147375,LOC103393291,LOC107583318,LOC105890774,LOC107672151,LOC107695138,LOC107748796 non-coding upstream 146623 6000129 ~ 6002642 (+)
G152201 NA non-coding upstream 274962 5873764 ~ 5874303 (+)
G152179 smurf1 non-coding upstream 318602 5794124 ~ 5830663 (+)
G152483 NA non-coding downstream 209486 6359069 ~ 6359290 (+)
G152485 NA non-coding downstream 222652 6372235 ~ 6372529 (+)
G152486 NA non-coding downstream 223746 6373329 ~ 6373554 (+)
G152480 NA non-coding downstream 240193 6389776 ~ 6390296 (+)
LOC120574684 NA non-coding downstream 252737 6402320 ~ 6410964 (+)
chst12a chst12,LOC103360067,LOC100699819,LOC101072910 other upstream 191948 5950424 ~ 5957317 (+)
G152149 actb,LOC107581721,LOC102799139 other upstream 377398 5725886 ~ 5771867 (+)
slc29a4 slc29a4,LOC107104199,LOC107105090 other upstream 502075 5626207 ~ 5647190 (+)
G152125 NA other upstream 598719 5533856 ~ 5550546 (+)
rbx1 rbx1 other upstream 684962 5461939 ~ 5464303 (+)
dexi dexi,LOC107590611 other downstream 1120545 7270128 ~ 7274611 (+)
emp2 emp2 other downstream 1190402 7339985 ~ 7356838 (+)
G152892 NA other downstream 1977682 8127265 ~ 8127981 (+)
mcrip1 mcrip1 other downstream 2295837 8445420 ~ 8449305 (+)
mapk3 mapk3,LOC104942729 other downstream 2516887 8666470 ~ 8684765 (+)

Expression


Co-expression Network