LOC120575492


Basic Information

Item Value
gene id LOC120575492
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 6055758 ~ 6068746 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826318.1
GGTATCTGCGGCCTGACGGAAATACAGGCACGTAAACGCACCGGAAAAATCAAAGCCATTTTCCTACACTGGCTCCATAAATAAAGGATGAAACAGAATAATAAAACAGAGAGGACTGATAACTGATGAAGTGGAACATGACGCTGCTCCAACCCCCCAGGACAAAGTACTTGATGAATTCCACCATCACCAGCTCCCATGACGTCCTAGAGCCGGTCTACGAAGACCTGGATGCGCCGAAGcCTGCTGTCACAGATGGAAGCCAGTCAGAGGTCGAAGCCAAGCCTGTACCTCCTCCCAGGTCCAGACAATCCCAGTCCCAGTATGACGATATCAACATCGTTTACTCTGCAGACACAACTAGCAATACAACCAATGCAGTGAATTCCCAACTCGGTGAATATCCTGCAGACTATAAGGCACCTCGCCCTGTTCGTCCTCCTCCCAGACCACCACTGAGCAAATGTATGACCTCCATGAAACTCAAAGCAGCAGTCGAAGAAGACAATCACTGTATAAGTTCAAACTCTGAGCCAACTCCTCCAGCTGATACTCCTGAGGAAATACCATCTCCTCCTCCGCCTCGGCCTGAACGCCGCCCTTCTCCCTCCAGCTTTTATGGACCACATTCTACAATGGGACCAAAATATGAGAGCTACACTGATGAGAGTCAGCAATCCAGCCATTACTACATGAGCTTTATGCAAGAATCTCCTGCCTCAGCTGCTTCTGAAGAAGAGGTGACCCCCTGCGGGACTTTTAATACGGCCACTGACCTACCTGCAGTCCCGCCTCGATTCAGGAAgttccccctcccctcctctgcctccttgtGTGAGACCTCGCCTTTACAGGCCACAGACCGCACTGACAGACCTGCAGTTCCGCCTCGACTCAGGCAATCCTCCCTCCCCTGCTCCGCCTCCATCTGTGAAACCTCACCTTTACAGAAACCTCCACCGCCTTCATTCAGCCCGCCATCCCCACCTTTAAAAGGGAAAGCATTGGAGTCAGTGAGATACAGTGAGATACAGGATCCTCCCTACCTGGACATACTGCCAGGGGATGTAGATAACAGGACAAAAGAGAGGCCAGCAGTACGCTACCAGAGTGACGGCTGCTCCCCTCATCAACAGACCCCCGAGGATAAAGAGGAAATCACTGGGATGTTGAGATGGTTGATACGTGTGTCAAAATCTGATTCCATGGCTCCGTCATTGTATGGCCTCAGTCTAGAGGAGGAAATAAGATCATTTAATCAGAGGGCGATAAATGTGAGGAAGGCTCTGCGTCTCTACAACCTTCTCATGATGAAGCGCAGTGAAAGCCTGCGGACCATCATCGGTGAGTTCAGCTCCATCTCTGACAGCCTGGACAAGATAAAGAAGACGGCCAAAACCATGGGCATTGCTGGAGGCACCACAGGTGCTGTTGGAGGGGTGACTGCAGTGTTGGGTGTCGTCTTCGCTCCTGTCACCTTTGGTACCTCGCTTATTGCTACAGCTGTTGGTGCTGGTATGGTGGCGTCCGCTGGCGGCATGGGAGCCCACACTGCTAAAATCAACAAGAAGATTGTGAATAAGATGACAGTTGAGAAACTAGTATATGAATATAAGGGAAATGTTGTAGAGCTGGAACATTGTCTGGGGTTCATCCTCTCTGGGATGAATGAGCTGCGAAGGCACGACATTGCCAGGTTACAGAGGGCAGGAGCCCAGCCTGATGCACTGAAGACGGCACATCTGTCACAGTCGGTGTTTAACATGAACAATGATAGGAAGACCTCCAATGCACACGCAGGCGGGATGTCCTCTGAGAGGCTGCTCCAGGACTTTGTCAAGGAAATGGATCAGTATTTTACAGAAAAGGATGATCAGAAGCTGAAGAAGTCGAAGAGGAGCAGGTTTTCTGGTAGAGTTCGCCTGCTGGCAAATAATCTAGCAGATGAGCTAGATCATCTGAATCGTATGTGGGAAGTGTTTAGTtgaatcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttttatcacTTGTATTTTAATAAACATTGAATATTTGTTAAAACCTAATGTGTGGTTCACTAAAGCAAGTATTTAAAGAAAGTTCAAGATTGTAGTTATTCTACCATTCATGATTGTGCTAAATAAAAGCGCTGAATGAATGGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826318.1 True 2250 mRNA 0.49 13 6055758 6068746

Neighbor

gene id symbol gene type direction distance location
mief1 mief1,LOC102791538 coding upstream 14107 6037258 ~ 6041651 (+)
LOC120575455 LOC103358546,LOC101474779,LOC100705581,LOC102298191,LOC102212168,LOC108236189 coding upstream 21678 6023234 ~ 6034080 (+)
card11 card11 coding upstream 111577 5918866 ~ 5944181 (+)
mmd2a mmd2 coding upstream 150876 5887753 ~ 5904882 (+)
LOC120573990 LOC103393299 coding upstream 183670 5845125 ~ 5872088 (+)
atf4b NA coding downstream 190 6068936 ~ 6071932 (+)
adsl adsl coding downstream 14031 6082777 ~ 6093726 (+)
tmem150b NA coding downstream 26393 6095139 ~ 6100227 (+)
pdgfbb NA coding downstream 65914 6134660 ~ 6148129 (+)
pvalb6 LOC107087166,LOC104944083,LOC103371237,LOC105933549,LOC103147389,LOC100701083 coding downstream 113646 6182392 ~ 6228086 (+)
G152350 NA non-coding upstream 38287 6017217 ~ 6017471 (+)
G152336 LOC102224681,LOC103147375,LOC103393291,LOC107583318,LOC105890774,LOC107672151,LOC107695138,LOC107748796 non-coding upstream 53116 6000129 ~ 6002642 (+)
G152201 NA non-coding upstream 181455 5873764 ~ 5874303 (+)
G152179 smurf1 non-coding upstream 225095 5794124 ~ 5830663 (+)
G152154 tnrc18,LOC102789128 non-coding upstream 382158 5672446 ~ 5673600 (+)
G152387 NA non-coding downstream 25173 6093919 ~ 6094215 (+)
G152415 NA non-coding downstream 80519 6149265 ~ 6149583 (+)
G152483 NA non-coding downstream 290323 6359069 ~ 6359290 (+)
G152485 NA non-coding downstream 303489 6372235 ~ 6372529 (+)
G152486 NA non-coding downstream 304583 6373329 ~ 6373554 (+)
chst12a chst12,LOC103360067,LOC100699819,LOC101072910 other upstream 98441 5950424 ~ 5957317 (+)
G152149 actb,LOC107581721,LOC102799139 other upstream 283891 5725886 ~ 5771867 (+)
slc29a4 slc29a4,LOC107104199,LOC107105090 other upstream 408568 5626207 ~ 5647190 (+)
G152125 NA other upstream 505212 5533856 ~ 5550546 (+)
rbx1 rbx1 other upstream 591455 5461939 ~ 5464303 (+)
dexi dexi,LOC107590611 other downstream 1201382 7270128 ~ 7274611 (+)
emp2 emp2 other downstream 1271239 7339985 ~ 7356838 (+)
G152892 NA other downstream 2058519 8127265 ~ 8127981 (+)
mcrip1 mcrip1 other downstream 2376674 8445420 ~ 8449305 (+)
mapk3 mapk3,LOC104942729 other downstream 2597724 8666470 ~ 8684765 (+)

Expression


Co-expression Network