mmd2a (mmd2)


Basic Information

Item Value
gene id mmd2a
gene name mmd2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 5887753 ~ 5904882 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825021.1
CCCGCGGAACATCCTGCAAACAGATCTGAGACTCCGAAAAAAATCTCTGTACAGTTCCCCAACACCCATCGCCTCCGTGTTCCCACCGGGATGGCTCGATGTTTGACCACCGGAGAAGTCCCGGCACTTTAGATAAGAGTcgtgtatttgtgtgcagctGACTCTGCAGGGTCGATGCCCCTGACGGActttatgtgtttatgtttgcaCGCGCGGCGGTGGGACATCCGGAATGGGGGATCCGTAGGAGGAGACGACGCTCGCTGGTGTGCTGTTAGCAAATAGAGCGCACCAACGCgcgcgcaaaaaaaaaaaataaaagcccatACGCACGAGATGGACTTTAAGAGGACAAAATTTGGaagGTTCATGAACTGCAGGGTCCCAGCCAGTAAGAGATACCAGCCCACTGAATATGAACATGTCGCAAACTGTGCCACACATGGGGTATGGATCCTCCCCAGTCTGGTGGGCGGGTCTGTGCTCTACTTCTTGTCTGTGGACCAATGGCATAGTGTGGCTGCCTGGCTCTATGGGAGCGGTCTCACCGGCCTGTTCGTCACGTCAACGCTCTTCCACACCGCTGCCTGGAAAATCAGCCAcctccggaAGGTGGAGCAGCGCTTCCACATGTGTGACAGAATGGCCATCTACTTCTTCATAGCTGCCTCCTACTCTCCCTGGCTGATGCTGAGGGATCTGGGGCCCTGGGCGTGCCACATGCGCTGGCTCATATGGCTCATGGCTTGCGTAGGATCCGTGTACGTCTTCTTTTTCCACGAGAGGTACAAGCTGGTAGAGTTGTTTGGATATGTGGCCATGGGGGTTGTTCCGGCTTTGGTCATCCTGTCTATGGTGGAgcgtgcaggtgtgtgtgaacTGGCAGTGGGAGGTGTCTTCTATGTGGTGGGCGTGGTCTTCTTTAAGAGCGATGGCCTCGTCCCTTTCGCCCACGCCATCTGGCATCTTTTCGTGGCGGCGGGAGCATGCATTCATTATTACGCCATCTGGAGGTACCTGTACTTACCCGGGCCGCTGCTGCAGACGTCGAGGTGACTAGCCTCTTCTCGTCATTAGGCCATTTTGTTTTGACTACAACTAACCTGACTCACGAGGCTGAACCTTGAGAGACGCTGCTGAGACGATCGGATCGCACTGGCTGCTGCAGATCAGATGAAATTCTCCACAGTTGGGGCCAAAACCCCTGGGGGGGAATCTTACTGTTAATCtaaaaggcatttttttttaacatgcttaTTATATAACAGACTGATCAGTGAACATTCATAACTGACATAACCAAACGTACGCAGGAATACGACTCTCATTCTGCTGTCCAAGACATTTTTATCATCAGAAAGATAAGAAACAGCCCTGGGTATGAATCTTCATTTGTGTTCATCACCTGCTGGGAGATGTTTGTGCAAACAGGGCAACATATAATGTGCCAGCAAGCTTAGATGACCAATGTTCAGTGAAATGGAGTAGTTTGACAATTTGGTAATGCGCTTTATTCCCTTTCTTACTGGGAGTTAGATGAGGAGATTGATACCATTCTCATTTCTGTACTAAATACATAGTCAGCAACTCTCTGTAAGAATAAGCAAATAAGCGTATAAAACGTATTTCTTTAATCACACATCTTCATAAGAGAACTGACGACATACACTCTGTGACTAAACTATCCTGGGCTAATAAACTCCACCCTTTACACCTTTACATATTCCAACCGTAGGTTATGTGCCAAAACGTTCCACAGAGGCATTCCTCTATATTGGTGCTGCTAACCCCTACTCCActttattttggttttgttcatttttgcaCAGTggcaaaatatgaaaatatagaGTTGGCATTACAAACAACACATAACGGTTTCATAAACAAACGTTTTAGGTTGACTTAAACTGCATTAAGCAACCGGCAGACAGACTTAAAGTCACCATATATTGGCTGATATGAATTCACATTGACTGATGACCCTCTCTTACTCCAGATAATAAGTCGACTGTTGAGGATAGCGGGCCTCAGTAGCCCGATTGTGATTCTGTTTTGATTTACATTAGTGTTGAATCTGCCTCAAAATCAATTCTCATCCTTTTGCGTTATGTTATTTGAAAGATTAAAAGTCTAATCTAGAGCTAATGTCACACTAAGTGTATTAAATGTCGCGGCTATAAGCATTAGTTATCTTCTTTAGAGGACGATGATTGCAAGTTGTCCTGTTTAAGTGGTGCACTCTTATCCATGAGCACTTTTCTATCAGCaacaatgttgaatgaagtaGAATTTCCTAAAATCCTCAGAATACACATGGGCATGTTATACACCTTTTTTTACGTTTTAATTTTTATACTTCTTTAAGCGCTGTATGGATCACACTTGCCGGTTTCCCTCCCCCTAACCTCTAGTAGTTCAACTGTTTGTTTTACACAGCAATTACTCAGGAAGTGAGCATTTATTTAAtgatttaatgaaaaaaatcagatgatctattttgtaaaattgtattttcATTGTATTAAAGACGATAAACTATA

Function

symbol description
mmd2 Enables protein kinase activity. Involved in several processes, including positive regulation of Ras protein signal transduction; positive regulation of neuron differentiation; and positive regulation of protein kinase activity. Located in perinuclear region of cytoplasm.

NR:

description
PREDICTED: monocyte to macrophage differentiation factor 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825021.1 True 2543 mRNA 0.45 7 5887753 5904882

Neighbor

gene id symbol gene type direction distance location
LOC120573990 LOC103393299 coding upstream 15665 5845125 ~ 5872088 (+)
fscn1a fscn1 coding upstream 105973 5762984 ~ 5781780 (+)
cpsf4 cpsf4 coding upstream 277289 5602468 ~ 5610464 (+)
shmt1 shmt1,LOC106933460,LOC107104202 coding upstream 285779 5590464 ~ 5601974 (+)
pdap1b pdap1,LOC102785718 coding upstream 299983 5583260 ~ 5587770 (+)
card11 card11 coding downstream 13984 5918866 ~ 5944181 (+)
LOC120575455 LOC103358546,LOC101474779,LOC100705581,LOC102298191,LOC102212168,LOC108236189 coding downstream 118352 6023234 ~ 6034080 (+)
mief1 mief1,LOC102791538 coding downstream 132376 6037258 ~ 6041651 (+)
LOC120575492 NA coding downstream 150876 6055758 ~ 6068746 (+)
atf4b NA coding downstream 164054 6068936 ~ 6071932 (+)
G152201 NA non-coding upstream 13450 5873764 ~ 5874303 (+)
G152179 smurf1 non-coding upstream 57090 5794124 ~ 5830663 (+)
G152154 tnrc18,LOC102789128 non-coding upstream 214153 5672446 ~ 5673600 (+)
G152148 NA non-coding upstream 253892 5633487 ~ 5633861 (+)
LOC120575023 NA non-coding upstream 325363 5557625 ~ 5562390 (+)
G152336 LOC102224681,LOC103147375,LOC103393291,LOC107583318,LOC105890774,LOC107672151,LOC107695138,LOC107748796 non-coding downstream 95247 6000129 ~ 6002642 (+)
G152350 NA non-coding downstream 112335 6017217 ~ 6017471 (+)
G152387 NA non-coding downstream 189037 6093919 ~ 6094215 (+)
G152415 NA non-coding downstream 244383 6149265 ~ 6149583 (+)
G152483 NA non-coding downstream 454187 6359069 ~ 6359290 (+)
G152149 actb,LOC107581721,LOC102799139 other upstream 115886 5725886 ~ 5771867 (+)
slc29a4 slc29a4,LOC107104199,LOC107105090 other upstream 240563 5626207 ~ 5647190 (+)
G152125 NA other upstream 337207 5533856 ~ 5550546 (+)
rbx1 rbx1 other upstream 423450 5461939 ~ 5464303 (+)
G152028 aco2,LOC103370792 other upstream 510014 5370950 ~ 5377739 (+)
chst12a chst12,LOC103360067,LOC100699819,LOC101072910 other downstream 45542 5950424 ~ 5957317 (+)
dexi dexi,LOC107590611 other downstream 1365246 7270128 ~ 7274611 (+)
emp2 emp2 other downstream 1435103 7339985 ~ 7356838 (+)
G152892 NA other downstream 2222383 8127265 ~ 8127981 (+)
mcrip1 mcrip1 other downstream 2540538 8445420 ~ 8449305 (+)

Expression


Co-expression Network