G152201


Basic Information

Item Value
gene id G152201
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 5873764 ~ 5874303 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU206220
tcattttagtttcagATGAACGTTTCACATTTTTTACAAAATCATTAGAAAACGTCTGACAATCCCATGGCTGGTCCTCGTTTAGCGTCTTCAGACACCAGAAGGATTAGTGGGGAATCATGCAGCATCCTGGACCCGCTGAGGCTCAGCCTGAGCTCCAGATCGATCAAATTATAATCCACAGTTCACTCACTTATCCCAGTGTGTAAGATCTTGAAGCCACGGTCATAACCTGACAATATGGTACAGTGATATCGTTCCACATCTAGCAATGTACAGAGTAGAGATACAGTGGGGGTGAGGCGCACGAGGAGGCGGTCACTGAAGACAAATCACTGACAGCCTCCTGCCTTTCTCAACTGATCTGCTAAGTGATCCTCAGCACCCAAATGTCTTCGATGTATGGACAGTACAAGTACCACATCAACAACACCATGCATGTTTTCTTACGCATGACACATCATTGGTTATGATTATGTAGATTTAAAAGAGCGTTAATATCAGAGTAAAATCAACCAATGGTTGCAGGCCTTGAAAGgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU206220 True 540 lncRNA 0.44 1 5873764 5874303

Neighbor

gene id symbol gene type direction distance location
LOC120573990 LOC103393299 coding upstream 1676 5845125 ~ 5872088 (+)
fscn1a fscn1 coding upstream 91984 5762984 ~ 5781780 (+)
cpsf4 cpsf4 coding upstream 263300 5602468 ~ 5610464 (+)
shmt1 shmt1,LOC106933460,LOC107104202 coding upstream 271790 5590464 ~ 5601974 (+)
pdap1b pdap1,LOC102785718 coding upstream 285994 5583260 ~ 5587770 (+)
mmd2a mmd2 coding downstream 13450 5887753 ~ 5904882 (+)
card11 card11 coding downstream 44563 5918866 ~ 5944181 (+)
LOC120575455 LOC103358546,LOC101474779,LOC100705581,LOC102298191,LOC102212168,LOC108236189 coding downstream 148931 6023234 ~ 6034080 (+)
mief1 mief1,LOC102791538 coding downstream 162955 6037258 ~ 6041651 (+)
LOC120575492 NA coding downstream 181455 6055758 ~ 6068746 (+)
G152179 smurf1 non-coding upstream 43101 5794124 ~ 5830663 (+)
G152154 tnrc18,LOC102789128 non-coding upstream 200164 5672446 ~ 5673600 (+)
G152148 NA non-coding upstream 239903 5633487 ~ 5633861 (+)
LOC120575023 NA non-coding upstream 311374 5557625 ~ 5562390 (+)
G152115 NA non-coding upstream 404669 5466285 ~ 5469095 (+)
G152336 LOC102224681,LOC103147375,LOC103393291,LOC107583318,LOC105890774,LOC107672151,LOC107695138,LOC107748796 non-coding downstream 125826 6000129 ~ 6002642 (+)
G152350 NA non-coding downstream 142914 6017217 ~ 6017471 (+)
G152387 NA non-coding downstream 219616 6093919 ~ 6094215 (+)
G152415 NA non-coding downstream 274962 6149265 ~ 6149583 (+)
G152483 NA non-coding downstream 484766 6359069 ~ 6359290 (+)
G152149 actb,LOC107581721,LOC102799139 other upstream 101897 5725886 ~ 5771867 (+)
slc29a4 slc29a4,LOC107104199,LOC107105090 other upstream 226574 5626207 ~ 5647190 (+)
G152125 NA other upstream 323218 5533856 ~ 5550546 (+)
rbx1 rbx1 other upstream 409461 5461939 ~ 5464303 (+)
G152028 aco2,LOC103370792 other upstream 496025 5370950 ~ 5377739 (+)
chst12a chst12,LOC103360067,LOC100699819,LOC101072910 other downstream 76121 5950424 ~ 5957317 (+)
dexi dexi,LOC107590611 other downstream 1395825 7270128 ~ 7274611 (+)
emp2 emp2 other downstream 1465682 7339985 ~ 7356838 (+)
G152892 NA other downstream 2252962 8127265 ~ 8127981 (+)
mcrip1 mcrip1 other downstream 2571117 8445420 ~ 8449305 (+)

Expression


Co-expression Network