G152115


Basic Information

Item Value
gene id G152115
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 5466285 ~ 5469095 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU206087
ATTAAATCATAATTTTCCAACGGGGTCAGACATCATGATCAgtaatattttttgcatttataATAACAGACCGATTACAAAAAGTGGCGACACTTTGTGAGAGTTCGGCTATgtttggagaaagaaaaaaccTAAACTAAAGTATTgaatggctgtaaaaaaaacaaattgtatgcAGGAGCTTCCAGTTTAGCTTTTTCAGATACAGGTTAATAAGAAATGTCAACCTGTGGTTTAGTAAAGTCCCCGCTGAGAGGAGTCAGTGGGGGTTATCAGACCTGACGCCTAACCATCGGGTTGATTTGTTGGGACGTTGCTAAGTGCTAACAGGCTGATtaagaacatttaaaaagttGCCCCACCTTCTCTACATGACACCAATTAACCCGTCACCTGCTCCCCTGTTTGATCTGCACACGGTGGAATAATAGTTGAAAAGCAGTGTGGCTCTCCAGATAGTTTCCCCACGTATCCTCTCTTCCTCGGTCGGTCCCGTCTATGGCTGTGGTGACGCTCCAAATTTGGAACTCAGCTTGGTGACGAGCGCCATGATTTTGGGGTTGTTCTGGTACTTGGAGATGTTGGCCGGGTTCTGTGCCACATCCTGGAAGGCGGTCATCACCTCAGGGTCCTCATGGCATTAAGCAGCTCAGGATCCTTCAGGAGTTCGCCGAGACCAGGCATGCCAGCAGGGGCTCCGCCTGGGAATCCAGCAGGACCTGGGAAGAATCCTCCTCCGAACTGTCGTGCTTCCTCCTCCTGATGTGAGACAAAAGAATGGTACGAGTTTAATAGTGTTGGACGCATTCAGTGGTTGTCATTAGGCTAACCAATAACCATCATTGGGGAAATCGTAAAAATCGTATTTGGTTGGTGTTCAAAATAATGGATTTAAGAATGTCGATGAGGTCGTCTCTGATGGAGAGACAGCCTTGAGCTGCACGTTTGTGGTCTGAGGTGGGAAGTGGCGACTGGCTTCGCTTAACCCCTTCCCTAAACAACAATCGTCCAATCCTAGTTTAGCAAACAGAACTAGACACGTGTTGAAGAAGTGTGCATGGGGGACTTGTAAGAGTGATACTCTgtatattaaagtgatggtttggagtaatttcaccctatgctgc

Function

GO: NA

KEGG:

id description
ko00190 Oxidative phosphorylation
ko04723 Retrograde endocannabinoid signaling
ko04714 Thermogenesis
ko05010 Alzheimer disease
ko05012 Parkinson disease
ko05016 Huntington disease
ko04932 Non-alcoholic fatty liver disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU206087 True 1127 lncRNA 0.46 3 5466285 5469095

Neighbor

gene id symbol gene type direction distance location
trnaq-cug_13 NA coding upstream 4525 5461689 ~ 5461760 (+)
chadla chadl,LOC103370796 coding upstream 5022 5453643 ~ 5461263 (+)
rangap1a rangap1 coding upstream 13649 5438507 ~ 5452636 (+)
LOC120575346 tob2 coding upstream 70511 5386505 ~ 5395774 (+)
LOC120575092 pmm1 coding upstream 118659 5333449 ~ 5347626 (+)
xpnpep3 xpnpep3,LOC102784555 coding downstream 9011 5478106 ~ 5495588 (+)
ep300b LOC100700725 coding downstream 28855 5497950 ~ 5532262 (+)
smcr8a smcr8,LOC102303222,LOC102212603,LOC102782846 coding downstream 99490 5568585 ~ 5578672 (+)
pdap1b pdap1,LOC102785718 coding downstream 114165 5583260 ~ 5587770 (+)
shmt1 shmt1,LOC106933460,LOC107104202 coding downstream 121369 5590464 ~ 5601974 (+)
G152008 NA non-coding upstream 33159 5367060 ~ 5433126 (+)
G152040 LOC104949869 non-coding upstream 37099 5428395 ~ 5429186 (+)
LOC120575483 NA non-coding upstream 103821 5361570 ~ 5362464 (+)
G152022 NA non-coding upstream 107449 5354830 ~ 5358836 (+)
G151828 srebf2 non-coding upstream 520338 4818335 ~ 4945947 (+)
LOC120575023 NA non-coding downstream 88530 5557625 ~ 5562390 (+)
G152148 NA non-coding downstream 164392 5633487 ~ 5633861 (+)
G152154 tnrc18,LOC102789128 non-coding downstream 203351 5672446 ~ 5673600 (+)
G152179 smurf1 non-coding downstream 325029 5794124 ~ 5830663 (+)
G152201 NA non-coding downstream 404669 5873764 ~ 5874303 (+)
rbx1 rbx1 other upstream 1982 5461939 ~ 5464303 (+)
G152028 aco2,LOC103370792 other upstream 88546 5370950 ~ 5377739 (+)
G152024 NA other upstream 104990 5359654 ~ 5361295 (+)
G151995 NA other upstream 246535 5215685 ~ 5219750 (+)
LOC120575156 LOC102785031,LOC103371174,LOC107096643 other upstream 471764 4975701 ~ 4994521 (+)
G152125 NA other downstream 64761 5533856 ~ 5550546 (+)
slc29a4 slc29a4,LOC107104199,LOC107105090 other downstream 157112 5626207 ~ 5647190 (+)
G152149 actb,LOC107581721,LOC102799139 other downstream 256791 5725886 ~ 5771867 (+)
chst12a chst12,LOC103360067,LOC100699819,LOC101072910 other downstream 481329 5950424 ~ 5957317 (+)
dexi dexi,LOC107590611 other downstream 1801033 7270128 ~ 7274611 (+)

Expression


Co-expression Network