G152024


Basic Information

Item Value
gene id G152024
gene name NA
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 5359654 ~ 5361295 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU205974
ACGCAGATGATAAGCCCTTTTACTGTGAGACAAAATAGACGCACACAATATTACAAAGGTTGTTAAATAAATTGAGGATGCGTGCACAAAATCCTTTGGGAGAGGTAAAATctcaaatacaaattaaatattttaagctTGAAATTGTTTTGTCCCACtgaaaaaactgtttttattgttgcacGGTTACCTGTGTTTAGATCTTGATGATGCAACTGAGTTTTAAACTGTCCTGTGGGTCTAATTTCTATCAACAAAAATATCCCTCAGCCTTATTTCTCTCACTTTCAACCTCAAGTCTGTCGGTAAGATGTTCCATCGTTAGGGGTCAATGTAacacttatcagttcaattttctaaacacaaacggacatttggaaaaacagaaaaatgggttccaatatccaatttttcattttttttccgccttgacaaattaaaaaattggagctttaacctgtttttattcagaggatcagaaatttagaaaattacaaaattgcgtctgggctccaattattcaatactgccatggtattctctccctcgttcttCTAGCTACCCCACCCcaaaccatcagttgcacctCTGACCTCAAAGTCTGtcagttttggttttttttggtccatatgtaGTTAATGAgctgcatattccacaaagtagaggaagagaataccattacagtattgaataattggagctcagacgcaattttgtaattttctcaatttctgatcctctgaataaaaaactgaaaattggaaaaacgggttaatttttttaatttgtcaaggtggaaaagaattgatatttgaacccatttttctgtttttccaaatatcCGTTTGttcttagaaaattgaactgataagcgttacacggaCCGTTAGGCGCCACATCGTTTTCATCCCTGACAGATGCTGCTCAGGGTTCAACACCTCCTACTTTGAGCCATTTACGTCAGATTTTATAACCTGTGTATGTCCGACTGTCACGCCAAAGTAGTGATGACGTTGAGATTCAAATGATTAATGGCCTAATTCTTTTGAATTGGGGGTCAAAATCTCACCAAATGTCCATTGAATTATTCTGTAGGGTCAATTTCACATATGTACACATGAAGCTGGCGTGTTCAGGGCagtattataaaaaaacaacaacaatcagtCTCAATGTGACATCACATCTTGGTTCAGGGAGCTGCTCGACGTTGTGTCTTGACTTGTGTACCAACGTCCTGGGTTCTGTGTCTCCAGCTGGCCGTCTCTCGTCACGATGGTCGAGCTGTCAGTTGCCACCAAatgtcgtcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcagcgCTAACTGTTCCACCATGACAGCAGCCCCAGCCCCGGGTCACAGATGGTCCCCTAAAACAACAGCGCAGTGGGTCAGGATGGACGCTAAGCtacttttgttacattttacgCACAGTAATTTGTGTCCTACAGTGATTAGTCCTATTTTCAGAACTGTGTGGACTTGGAAAGTAGTTTGGCTGCATCTCTCGCGGTAACGGTTCTGTAACCTTTATGAACTGTTTGAACGACCGGTCTAAATGGAAAACTCAAAC

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0016072 rRNA metabolic process biological_process
GO:0006364 rRNA processing biological_process

KEGG:

id description
ko03008 Ribosome biogenesis in eukaryotes

RNA

RNA id representative length rna type GC content exon number start site end site
TU205974 True 1615 TUCP 0.39 2 5359654 5361295

Neighbor

gene id symbol gene type direction distance location
LOC120575092 pmm1 coding upstream 12028 5333449 ~ 5347626 (+)
LOC120575090 NA coding upstream 50062 5303860 ~ 5309592 (+)
plbd1a plbd1 coding upstream 56580 5290118 ~ 5303074 (+)
trnar-ccu_4 NA coding upstream 69661 5289921 ~ 5289993 (+)
pick1 pick1 coding upstream 69903 5279647 ~ 5289751 (+)
LOC120575346 tob2 coding downstream 25210 5386505 ~ 5395774 (+)
rangap1a rangap1 coding downstream 77212 5438507 ~ 5452636 (+)
chadla chadl,LOC103370796 coding downstream 92348 5453643 ~ 5461263 (+)
trnaq-cug_13 NA coding downstream 100394 5461689 ~ 5461760 (+)
xpnpep3 xpnpep3,LOC102784555 coding downstream 116811 5478106 ~ 5495588 (+)
G152022 NA non-coding upstream 818 5354830 ~ 5358836 (+)
G151828 srebf2 non-coding upstream 413707 4818335 ~ 4945947 (+)
G151851 srebf2 non-coding upstream 474332 4884684 ~ 4885322 (+)
G151845 NA non-coding upstream 493012 4864722 ~ 4866642 (+)
G151821 rrp7a,LOC107673310,LOC107591059,LOC107569875 non-coding upstream 565987 4791411 ~ 4793667 (+)
LOC120575483 NA non-coding downstream 275 5361570 ~ 5362464 (+)
G152008 NA non-coding downstream 5765 5367060 ~ 5433126 (+)
G152040 LOC104949869 non-coding downstream 67100 5428395 ~ 5429186 (+)
G152115 NA non-coding downstream 104990 5466285 ~ 5469095 (+)
LOC120575023 NA non-coding downstream 196330 5557625 ~ 5562390 (+)
G151995 NA other upstream 139904 5215685 ~ 5219750 (+)
LOC120575156 LOC102785031,LOC103371174,LOC107096643 other upstream 365133 4975701 ~ 4994521 (+)
G151830 ndufa6 other upstream 530645 4824253 ~ 4829009 (+)
fam234b fam234b,LOC104962864 other upstream 537540 4806074 ~ 4822114 (+)
fmc1 fmc1,LOC102794917 other upstream 594097 4762973 ~ 4765557 (+)
G152028 aco2,LOC103370792 other downstream 9655 5370950 ~ 5377739 (+)
rbx1 rbx1 other downstream 100644 5461939 ~ 5464303 (+)
G152125 NA other downstream 172561 5533856 ~ 5550546 (+)
slc29a4 slc29a4,LOC107104199,LOC107105090 other downstream 264912 5626207 ~ 5647190 (+)
G152149 actb,LOC107581721,LOC102799139 other downstream 364591 5725886 ~ 5771867 (+)

Expression


Co-expression Network