plbd1a (plbd1)


Basic Information

Item Value
gene id plbd1a
gene name plbd1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 5290118 ~ 5303074 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825695.1
CGTCCTGCAGCCAATCCGGAAACGTTCCGCTCCCTGGAACTCAGGTTGGCTCGGACTTTCCCTTCGCCACCAACTGATTTCCTCTTCGCCTGAATCTCTGTTGAACGATTCACGTCTCTTTTTTGCAGTTCGTTTGGCTTTCGCTGTTTTTTACACAGCCATGCTTTTAGTAAAGAGGCTGTAtgtctttcttttatttgtcGCGGCTACGACCTTCGCCTCTGCTGACAAAATGACAGCAGCCACGGTGTACTGGGACCCCCAACACAAGATTGTCCTGCTGAAGGAGGGGGTGCTGGAGACGGATGGGGATGCATACGGGTATCTGAATGATACCCTGTCCAGCACAGGCTGGAGCATCCTAGAGATACGTGCCGGGTACGGAAAGACCCCCGAAACTGATGAGGTGACCTTCTTCCTGGCCGGCTACCTCGAGGGCTTCCTCACCGCCCAGCAGATGATGGACCACTACGCCAACATGTATCCACAGCTGATCAACGACCCAAAGATTCTCAGCCCCGTTCAAAATTTCATGACGAAGCAGGATGAATGGACCAGAGAGCAGGTGAAGCTGAACAAGAGCTCTGATCCTCTGTGGAAACATGCAGGCTTTATCGTGGCTCAGATGGACGGACTGCAAGCCGGAGTCGCACACTGGGCCAAGAAACAAGGGAAAAAGCCGCTGTCCCTGTTTGCCGTCCAGTTCCTGAACGCAGTGGGAGACCTGCTGGATCTGATCCCAGCCTTGGTCCCCACCTCCAACCCTCCGCTCAGAAACTACAAACTCCCCGGGATGGGTCACTGCTCTGCTCTCATCAAGATGCTGCCCGGCTTCGAGAACCTCCTGTTTGCCCACTCCAGCTGGTACACGTACGCTGCCACAATGCGGATCTACAAACACTGGGATTTCCACATCACCGAGCCCCACGCGGCCACTGGGAAACTGTCCTTCAGCAGCTACCCTGGTTTCCTGGTGTCCCTGGATGACTTCTACCTCTTGGGCAGTGGTCTGATGATGACCCAGACCACCAACAATGTCTTCAACTCCTCCCTTTTTGACAAAATCACTCCCAACAGCCTGCTGTCGTGGCAGAGGGTCAGGCTGGCTCACAGTTTGGCACATACCGGAGAAGAGTGGGCTAAAACCTTCTCCATGCACAACTCTGGTACCTACAACAACCAGTACATGGTGTTGGACAGGAGCAAAGTGAATCTGGGCCACAGCGTTGATGACGGCGCTCTGACTGTGGTGGAGCAGATCCCCGGGCTGGTGGAGTACTCTGACCAGACACAGGCTCTGCGCAGAGGTTACTGGCCGTCCTACAACATTCCCTTCCACCAGAAGATCTACGCGCTGAGCGGTTACGGAGACATGTGGAAGGAGTATGGAGAGGACTTCTCCTACGATCTCTGTCCCAGAGCCAAGATCTTCCGCCGTGACCAGGCTGATGTCAAGGACCTAGACTCCTTGAAGTACATCATGAGATTTAATGaCTACAAGAAGGATCCATACTCCAAGGGTGACCCCTGCAAGACCATCTGCTGCCGTGGCGACCTGAGGGCAGTGAAGCCTACACCGGGAGGTTGCTATGACACTAAGGTGACAGATTTCCACATGGCTGGGGACTTCGGCGCGGAGGCGGTGAACGGGCCAACGACGCAGGACGGACTCCCGCCCTTCACCTGGGACAAATTCAGCAGCATCAGCCACAAGGGTCTGCCACAGAACTACAACTTCACCTTCGTCAGGGTGCAGCCTCTTCTCTTTAAGCCatgagagaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctttctgatGCTTTCAGATTGTGGTTCACACATCTATTTACACACTGATGATTTTAATTGTATTCATTGCTGTCCTTTAAGTTAAGAATTGCGTCCAATCAACAAatgctttcttttttaagagtttACATTCTGAATAAGTGTAAAAGTACCTCCTTCCACCTGATAAAATGCAACATGTCAAACTGCCAATCAGATTTTGAATCCATATTTGAATGTGTATATGTCTCATGTCGATTTATTTTACTTCGGAATACAGTAAGAAACAGTTGTCTCTTTTTATACCTGCAGCCATTTGTGCCTTGAACACTGAGAGTAACCTAATGATTTCATAAAATGTAGAATCAATGCACTAAATCAGTGGTCATGCCGTCTtgaatctttatttttattttttttaaatgattgaaTTTCTTCATGCATGCGAACACTATCACTTCAGTGGTAAATGAAACAATCAGTGCAATGTTATACTCAGGGCTGCTTTTCTAGTGCTGTGATTTATGTGAATCCAAATCTCAggtttgtattttttatctaagcttgtgtttcttttgtaATATGATGTGCACATCTGCATCATGCCAACATTTGAAATTAAAGTTCTACAGTTGGACCAGCACA

Function

symbol description
plbd1 Predicted to enable phospholipase activity. Predicted to be involved in phospholipid catabolic process. Located in extracellular space.

NR:

description
PREDICTED: phospholipase B-like 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825695.1 True 2514 mRNA 0.49 11 5290118 5303074

Neighbor

gene id symbol gene type direction distance location
trnar-ccu_4 NA coding upstream 125 5289921 ~ 5289993 (+)
pick1 pick1 coding upstream 367 5279647 ~ 5289751 (+)
cdc42ep1b NA coding upstream 103362 5172805 ~ 5186756 (+)
LOC120575079 LOC102199849 coding upstream 207217 5072706 ~ 5082901 (+)
sox10 sox10 coding upstream 237795 5043221 ~ 5052323 (+)
LOC120575090 NA coding downstream 786 5303860 ~ 5309592 (+)
LOC120575092 pmm1 coding downstream 30375 5333449 ~ 5347626 (+)
LOC120575346 tob2 coding downstream 83431 5386505 ~ 5395774 (+)
rangap1a rangap1 coding downstream 135433 5438507 ~ 5452636 (+)
chadla chadl,LOC103370796 coding downstream 150569 5453643 ~ 5461263 (+)
G151828 srebf2 non-coding upstream 344171 4818335 ~ 4945947 (+)
G151851 srebf2 non-coding upstream 404796 4884684 ~ 4885322 (+)
G151845 NA non-coding upstream 423476 4864722 ~ 4866642 (+)
G151821 rrp7a,LOC107673310,LOC107591059,LOC107569875 non-coding upstream 496451 4791411 ~ 4793667 (+)
G151767 NA non-coding upstream 658117 4617915 ~ 4632001 (+)
G152022 NA non-coding downstream 51756 5354830 ~ 5358836 (+)
LOC120575483 NA non-coding downstream 58496 5361570 ~ 5362464 (+)
G152008 NA non-coding downstream 63986 5367060 ~ 5433126 (+)
G152040 LOC104949869 non-coding downstream 125321 5428395 ~ 5429186 (+)
G152115 NA non-coding downstream 163211 5466285 ~ 5469095 (+)
G151995 NA other upstream 70368 5215685 ~ 5219750 (+)
LOC120575156 LOC102785031,LOC103371174,LOC107096643 other upstream 295597 4975701 ~ 4994521 (+)
G151830 ndufa6 other upstream 461109 4824253 ~ 4829009 (+)
fam234b fam234b,LOC104962864 other upstream 468004 4806074 ~ 4822114 (+)
fmc1 fmc1,LOC102794917 other upstream 524561 4762973 ~ 4765557 (+)
G152024 NA other downstream 56580 5359654 ~ 5361295 (+)
G152028 aco2,LOC103370792 other downstream 67876 5370950 ~ 5377739 (+)
rbx1 rbx1 other downstream 158865 5461939 ~ 5464303 (+)
G152125 NA other downstream 230782 5533856 ~ 5550546 (+)
slc29a4 slc29a4,LOC107104199,LOC107105090 other downstream 323133 5626207 ~ 5647190 (+)

Expression


Co-expression Network