pick1 (pick1)


Basic Information

Item Value
gene id pick1
gene name pick1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 5279647 ~ 5289751 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825687.1
CAACTTCCGCTATGTCGCCGGAAGTGACAAAAGAAAGTAAACACGGGAGCTGTCAGTGGATTCAGAAATTAAGATTTAATAGCGAGTAAACGGAGCGATTCCAAAAAGATTTTTATATACACTCGGAGACTTTTGTATGGGAAACGGGTGCAGAGTCTAATAAAGGGATCAGGAGTGACACCGTCCTGCAATGTTCACAGACATGGACTATGAGTTAGAGGAGGATAAACTCGGTATACCAACAGTACCTGGTACTGTGTGTCTGAAGAAAGATGCTAATAACCTTATTGGGATCAGCATTGGTGGTGGGGCACAGTATTGTCCTTGTCTCTACATTGTTCAGGTCTTTGATAATACCCCGGCCGCTCTGGATGGGACACTGGCAGCAGGTGATGAGCTCACGGGCGTGAATGGGAAACCAGTGAAGGGAAAGACCAAAGTGGAGGTCGCCAAGATGATTCAAGCTGTACAGGGAGACGCAGTAATCCACTACAACAAACTGCAGGCTGACCCCAAACAGGGGAAGTCTCTGGATATAGtgctgAAGAAAGTCAAACACCGCCTGGTCGAGAATATGAGCTCAGGCACAGCAGATGCTCTTGGACTCAGTAGAGCTATTCTATGCAACGATGGACTGGTCAAACGACTGGAAGAGCTGGAGAAAACAGCAGAGCTCTACAAAGGGCTGATGGAGCACACCAAGAGACTGCTCAGAGCTTTCTTTGAGCTTTCTCAAACTCACAGAGCGTTTGGAGATGTGTTTTCAGTCATCGGCGTACGAGAGCCCCAGGCTGCCGCCAGCGAGGCTTTTGTGAAGTTTGCCGATGCTCACCGAAACATTGAGAAATACGGTATTAAGCTGCTGAAGACCATCAAACCTATGCTCCACGATCTGAACACGTACCTTCACAAGGCCATACCAGACACCAAGCTCACCATCCGCAAGTACCTGGATGTGAAGTTTGAATATCTGTCGTACTGCCTGAAGGTGAAGGAAATGGACGATGAAGAATACAGCAGTATTGCCATGGGAGAGCCCCTGTACCGCGTCAGCACCGGTAACTACGAGTACCGTTTGGTGCTGCGGTGTCGGCAGGAGGCTCGCGCTCGCTTCGCCAAAATGAGGAAGGACGTTCTGGAGAAGATAGAGCTGCTGGATCAGAAACAtgTCCAGGACATCGTGTTCCAGCTGCAGCGCTTCGTCTCAGGCATGTCCCATTACTATGACGAGTGCTACGCCGTCCTGAAGGAGGCAGACGTCTTCCCCATCGAAGTGGACCTCTCTCGCACCACGATCAACTACGGCAGCCAGTCGCTCTCCTACGCtggagacgaggaggaggaggaggaagaggagagcgGGGgcggagaggaaggagggagcaGCACAGGGAGACAAGCAGAGAACGGCGCTGAGAAACTGATCGATGacgaatgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggagatgaAGTCCACCCCTCTAACATAACTGTTCTTCACTTGCATTTCATGTCACTGCACTCCCCAAGTAGTGGATTATACTGTAGCAGTTGTGAAATGGATAACACTATCGCCATATAGGTGAATACTACTGAAAACTGCTGCTATAACGCTGTATGTGGGTGTATCGTGGTGTTTTCTTCCCCAAAAACTCTCAAATCAACAGCTTTGTGATTATTTTACCACTGTAACTTTTGACTGTCAACACTTTCTTTAAAAGACTACGTGCTTTTGATGTGTCTGCCACTTGTAAGGTCATTGCTTAATGACTGTGAGAGAGACACCACTCACAGAAGGCAATTTAGTTTTATTCTGAATGCTATGGAGGGGATTTTAATGTGCAGAGTAGGATTTATATGCCTATGAGGTGTGCCTTCTTAGCTCTCTATTGTGCGGAATGGGTCTGGGCCGCCTGTCAATGTGCATATTGTGGATTGTTAAAGTGATACcttgatatttacatttttattttgttattttctttgCTACAAACCTTTTGGACTTGGGATTTATTTAGctaaaattatattttgtgGTCAATGTTATGACATTTTGTCCACAGCTTAACAAACAAATGGCAAATGACACGACTGGATGAATATAGAAACGTGAAGGAGTTGTTGAAGATGACTACATATAGTTTGTTACATGCAGCTGTTACATTCCTTTGTCTTCTGCTTTTTTCTTGTTcttaacacttaaaaaaaaaaaaatagtttcagTCATGGGAGCTTCACaaccaaagtcttttttttttaagtgaatctGTTTCACCTACTTGTACCACATGCTTTAAGTTCAAGTTTACACACCTGCATTTCTCACTTTCCTTCAACAGCATGCTTTTTTCCATAGCAGCAGTGCCCCAGACTCTGGTAGTGTTTGGTAGAAGAGAAGGGTAAtggacacacacagcttcaaaTAGCTTTACCACTGTGTGGAAACGGATTGAAAAATGCTGTATGTATAAGTATGTACAAAGGGAGTGGGTGTAAAAACTCTGatgttttaacttttcttgTCATTCCCaccttatttatttgtttttcaaagtATATTTAAAAGTTTTAATGAGACAAATTGACTCTATATTGAATATTATCCACTTTCTGTTGCtctttgttttttgtcacattCGTTTTGCCTTCAGAGCGGATAAGATGATTTTTGTGCATTTTCATGATTTACTGTTGGGAATACTTGGAGGCAGCATCGCAACAATAAGTGCATTATTAGTTCATGtgtgaaattaaaaaaacattttgttcgTGTATTGTTCTCCTTGAATGTAATCAGTCAGAAGGACCAGCTGcatgttattttgtcttgcACAGATCGGGTTATGAGTCTAATAATGATGTAGTGTTTGGCCTACTTTAAAgggatattgttttttttgttttgtttttcagttaaCGATggattaaatgaaaaatgtaagttAA

Function

symbol description
pick1 Predicted to enable phospholipid binding activity and protein kinase C binding activity. Predicted to be involved in several processes, including dendritic spine maintenance; positive regulation of receptor internalization; and regulation of Arp2/3 complex-mediated actin nucleation. Predicted to be located in several cellular components, including cytoskeleton; perinuclear region of cytoplasm; and synapse. Predicted to be active in several cellular components, including cytoplasmic vesicle; postsynaptic density; and trans-Golgi network membrane. Orthologous to human PICK1 (protein interacting with PRKCA 1).

NR:

description
PREDICTED: PRKCA-binding protein

GO:

id name namespace
GO:0019904 protein domain specific binding molecular_function

KEGG:

id description
K24062 PICK1; PRKCA-binding protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825687.1 True 3066 mRNA 0.44 13 5279647 5289751

Neighbor

gene id symbol gene type direction distance location
cdc42ep1b NA coding upstream 92891 5172805 ~ 5186756 (+)
LOC120575079 LOC102199849 coding upstream 196746 5072706 ~ 5082901 (+)
sox10 sox10 coding upstream 227324 5043221 ~ 5052323 (+)
LOC120575072 kcnj4,LOC102800298 coding upstream 251876 5013499 ~ 5027771 (+)
LOC120573903 NA coding upstream 280648 4996204 ~ 4998999 (+)
trnar-ccu_4 NA coding downstream 170 5289921 ~ 5289993 (+)
plbd1a plbd1 coding downstream 367 5290118 ~ 5303074 (+)
LOC120575090 NA coding downstream 14109 5303860 ~ 5309592 (+)
LOC120575092 pmm1 coding downstream 43698 5333449 ~ 5347626 (+)
LOC120575346 tob2 coding downstream 96754 5386505 ~ 5395774 (+)
G151828 srebf2 non-coding upstream 333700 4818335 ~ 4945947 (+)
G151851 srebf2 non-coding upstream 394325 4884684 ~ 4885322 (+)
G151845 NA non-coding upstream 413005 4864722 ~ 4866642 (+)
G151821 rrp7a,LOC107673310,LOC107591059,LOC107569875 non-coding upstream 485980 4791411 ~ 4793667 (+)
G151767 NA non-coding upstream 647646 4617915 ~ 4632001 (+)
G152022 NA non-coding downstream 65079 5354830 ~ 5358836 (+)
LOC120575483 NA non-coding downstream 71819 5361570 ~ 5362464 (+)
G152008 NA non-coding downstream 77309 5367060 ~ 5433126 (+)
G152040 LOC104949869 non-coding downstream 138644 5428395 ~ 5429186 (+)
G152115 NA non-coding downstream 176534 5466285 ~ 5469095 (+)
G151995 NA other upstream 59897 5215685 ~ 5219750 (+)
LOC120575156 LOC102785031,LOC103371174,LOC107096643 other upstream 285126 4975701 ~ 4994521 (+)
G151830 ndufa6 other upstream 450638 4824253 ~ 4829009 (+)
fam234b fam234b,LOC104962864 other upstream 457533 4806074 ~ 4822114 (+)
fmc1 fmc1,LOC102794917 other upstream 514090 4762973 ~ 4765557 (+)
G152024 NA other downstream 69903 5359654 ~ 5361295 (+)
G152028 aco2,LOC103370792 other downstream 81199 5370950 ~ 5377739 (+)
rbx1 rbx1 other downstream 172188 5461939 ~ 5464303 (+)
G152125 NA other downstream 244105 5533856 ~ 5550546 (+)
slc29a4 slc29a4,LOC107104199,LOC107105090 other downstream 336456 5626207 ~ 5647190 (+)

Expression


Co-expression Network