xpnpep3 (xpnpep3,LOC102784555)


Basic Information

Item Value
gene id xpnpep3
gene name xpnpep3,LOC102784555
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 5478106 ~ 5495588 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824484.1
aacccacctttgaatcaaaataaaacgttcctcttatttgtgaaataagcatgccCATTTCAACTCCTACTCTCAAAGAATCTGAATCGAGAattgataagaaccggaatctaAAGGatgaatcggaattggaatcagaattgttaaaatccaaacgatgcccaaccctgtCCTAAGGGGGTTTGAGTAGGTCAGTGGGCCTACCAGCCTAACGGGGAAAAGCTTATAATGATGCCAGTGCTTGCATAACCTGTATATCATTTCATTGGTGGAGCATGTTGTAAGGTTTAGGCTAACTAAAATGGTAGTGGAGTATTTTCAGTAAAGTATAATTGTAATGATCGCTTTACTGTTTGTAAATTAATTATAAACTCAACTTCTTTGGCTTTGGCTCTGCCAATCGCAGCAGAAGGAGGCGGGATTAAGCGTCTCTGCCTGGGAAGCGAAATTCAGGGCAGTAAATTCCCAGCATCCACCACGAACGAATACGGTTAGCAAACGTGACTTCAAACTAGCGAGGTAAATGTCAGCCGAGGACACAAACAGCAGTTTGTGCAGACGATTTTGACGGAGCGGGGCGACATGCTGTGACTGATCGGTGTCCTCCAGTAGCAGCAACAATGTTGCCCTCAACCAGCACCTTGGTCCGGGCTGCTGCCAAGCTGCTGCCGAGGCGAAATTGGAGTCGAGGATGCGTCTGGTGCCCGTGCAGAAACATTTCTGTGAAACCAGGAGGGTTGAAACCAAAGACCGTTCCACCTCGGTACCTGGGCCAGCCCAGCCCTTACACTCATCCACACCTCATCAAACATGGTGAGGTGACTCCAGGCTTGAGCCAGACAGAATACGAGCTCCGCAGACACCGGCTGGCCTCACTTATCGAGGCCCAGTCAGACAGGCTGGGACCCTCTGCCTCCTCTAGCACCCATGTGGTCATCGTGTTGTCCCATCCGACCCGCTACATGACCAATGACATCCCTTATCCCTTCCACCAGAACCAGGATTTTCTCTACCTCAGTGGCATCCTAGAGCCTGACAGTGCTCTGGTTCTTTATGGGAAAGGACGACCAGACCAGGCCATCTTGTTTGTCCCCCGCAGAGACCCGGGGAGAGAGCTGTGGGACGGGCCCCGTTCAGGGAAGGATGGGGCGGCTGCTTTGACCGGCATAGAGAGAGTTCATAGCACAGAAGAACTAGGTGTTGTGCTCAAGTGCCTTAAAGGCACTGTGCTGTGGTACGACAGTTCTCAGCCCGCCCACCCTCGGCTCCACCAGACCCATGTGGTCCCCCTGCTGGAGGCGGGGTCGATGCCGCACTCTCTCAGGCCCCTCGTACACTCTCTTAGGGCCATCAAGAGCTCAGCAGAGGTAGCGCTCATGCAAGAAGCAGGTCACATCACAGCACAGGCTTTTAGGAGGACGATGGCTCTGTCTCAAGGAGACGTAGATGAAGCCGTGCTCTTTGCTAAGTTTGATTTTGAGAATCGGATCCATGGCGCCAACTTCCTGGCCTATCCCCCTGTTGTTGCTGGTGGGAATCGAGCCAATACTCTGCACTACATAAACAACAACCAGATTATCAAGGATGGTGAAATGGTGCTGCTCGATGGTGGTTGTGAATACTTTGGTTACGTCAGTGATATCACTCGAACATGGCCAGTGAATGGAAAGTTCAGTCCTGCCCAGGCGGAGCTGTACGAGGCCGTCCTGGAGGTCCAGCGCTCCTGTTTGTCTCTGTGCTCAGCGGGCGTCAGCCTGGATCACATCTACAGCACCATGCTGGCTCTGTTGGGACGACAGCTCAGGCGGCTAGGCATCGTCAAGGCCAGCACCAGCGACGCTGATGTATTAAAGGCTGCACGACGGTACTGCCCCCACCACGTTGGCCATTACCTGGGCATGGACGTCCACGACACTCCTGAGCTGTCCCGCTCACAACCTCTACAGCCAGGAATGGCCATCACTATCGAACCAGGGTTGTACATCTGTCAGGACAATGACCAGGTGCCAGAGCGCTTTCGCGGCCTGGGCGTCAGGATTGAGGATGATGTGGTGATCCAAGACAAGGGAGGCCCTCTGATCCTGTCCTCTGATGCACCCAAGACCATCGCTGATGTAGAGAAGGCCTGTGCCCAGAGATAGGGCAGGGAGAGGCAGACAAGTGACCAAGTGAGTCACAGGCATCGATGGCAGGCAGCGTGCTGCTCTTTTTCAACCGTCTCCACGGTGATGACATCGTCAAGCTCAGAGCCCAGGTACATGAAAGGTGGGAGCACACAGCAACTTGCAACAAGGCCTCAAAATGTAGAAATCTGGCGTGGAAGATCGTTGATTTTTGTTGTCTAGCTAAATGTTTAAAGAAACCGGTTTCATGTTTGTGAATGATTATGAAGAGCTCATCAACAGTAAAGCGTGGATTTAGTTGAGTGTTAGGCTGCATTCACACCAAATCCGGCATTGCACCTATAAGCAAAGGGTAGTGCAGCGGAGTGGGAGCGTCGCTTAAAATGACCAATCTGTGTCTCCATTGTGTTCCCCATGGTGCTAGCTTTTAGCCATGCTGCTAGTATGCCAGGTCCTACGAGGGTTTCTCTTTCCGTATCGACggatttaaaaaacacattgacTTTTAATAACTAACCAGGATGCAAGGCCTATCGTTACCGAGGGTTTTAAACTGGTGCACAAGGCCAAAGTGAGTAACTATACGTGAAACATATCGTTACACTCCATTGTGTTTTGTCTGAACGCTGGTTACGTTGCTCCTGTTTCTACTTTTCACCGGAGAGTCGCTGAGCTTTTTTCCGGCATCCACTGCAGTCCTCACCGTCGCAGCCTTAACGCAATACCCACATTAAATTAATGGGAAAACTGGCACTTCAGTCGCAATGCCTGATCTGGTGTGAATGCAACCTTATAGTGAAAACACACCGGGTGTGTAAGCATCGCGTAGCGCagctatttttttatattttggcgcccatgttatccaatctgtccgtTCATACCGGGCGCGGAGAGGCCGTGTTGGCCCGTGCACTGCAGCGATCGcgaacacatttcaaaataaaacacctacAGTATGTTCATGGTGATTTTGGTTGTCTTGACCTCACAGTGAGACATGAGATCAGgcacatggagagagagagagacagacagagaggattGCTTTGTGGCTGGCGCACAGAAATATGCGTCCGGTATGAATGGTCAGGCGTGCGATCAGGCACGTGTGCTTTGCGGGCTTTACGCGCCACTTACGCGCTCGGTGTGTTTTCGCTGTTATAGGGGTTACGGTGTGGCTTTGGAGCGTATACTGCGCTGTAACTGCCGTATTTCTCCTCAAAAAGGTAATTACACATCAGGGCTACAGCAAGACAACATGGAGATGAATCTTGATAATGTGTAATACATTCATCTAGTGTTATCATGGTGCTATCAGCGGGTGAAATCTGATGCTGaactataaataaaaacctAGGAACAACCGTTAACCTCCTGCATCAAGTATATATTCAGTTGAAGACCCAGTGGTTAGATCCAACAACCATGGAAGCGTTTTCATTCTTAAAATCGATTTGCTccacatcatctttttttatttttttttttttcagagtttCCACCATTATGGCACACTAGGATAtaatggtttgtttgtttgttctttctctcactaaaaaaaaaacttgtttaaGCCTACGTGCACACACTTCATTTGTCTCCTacacaaaaaaagcataatTATTTCCCAGCTCATGCTGCAGTACAAAAGCTCAAAACACCATTGAACATTCACTCACTGAACTGCAGGAAGGTCAGGAATGACCACATTATGTCAAATCAACAGACCACCATGTACACCATGCACACCAGTGATGAATAAAGATGAACCTGTCTTAAATAGCTGCTCCTGACAAACCTGGTATGATGGTAATGATTACACCAATGCACTCAAATGGCTTAAAAAGTGTACACTGaaaagagtttgtgtgtgtgctgttgtgtcttttcagcagagagaaaaatgtgatctattttaaagaaaatggtGTTTATATGTATTAAAAAGATGAGATCTCTCATTGTATATGTaaatacatacctttttatttcctttttgctGACAAAACAAGGGAAAtggaatcatgttaaataatttaGGCTAGTAGTTGGAGTCCAATATGATGAAAATGAGTGGGTGGCCTATAGTAGCCTTGGACTAAACTCTGTAACTTACCCCAGGACGATGCTATTTGgtttgtggtgctcaaagtCCCGTAAGGAGTTTGgaaaaattaaaactttaacaTTAGAATGACACTGTAACCCACAATATTTCACAGACATTGTCGTGACAGTCTTCATTGAGAATTTAGCCTACTCCACACAGACGAAAGAAAATGTTCAAAGTCTGTAGATTGTTGAATTCTAACACCACAGCCACTGAAAATGCTTGTTTCTGATTTACTGCCACAGTCGGTACATTATTTTTGTTTGCTTTGAGTGTCATGGCTCTTACAACGACTGGATTAACCTGCTAGCAGGCCTGCTGTCCCTCCATCTCTGTGCATTACATACACAACATGGCATCTTAATTATCTTTTGCCCAGAGACCAACCAGTACTTTTCTGTTGGCCCCAGGTTTGCTGTGTGACAATTTTGTGGTAATTTAATTACATGGAATTCAGGAATATGCACCAGTTGATACTGTGCCTTAGTGGTGCATATTCCCAGCACATTTCCAATTTATCACAAATCGATGGATTCAAAGCAAACATGCGGCTTTTGCAACCCCTGGGCATTTGGAGCCTTGTGGCAGTTTTCTGTTTTGGCAAATTGGTAATCCAGTCTAGCCTCACCAACCCTCCCCCAAATAAAACTGTGTGCAGCCATTTCCAGCAAACCA
>XM_039824485.1
CGCGCTGCATGTGGGGGGGAaccagaaagaaaaacaattaaCAATTTATACATGTCTGGCTTTGTTTACGTGCTCAGCTGCAAACGTTATTGCCAGGCTTGTTCAGCTAGCAAAGTATGCTAACGAATCGATGAAATACTACCTCACCTTTGTTCACTCCACACTTCAATAATACGTGAAGCAGAAGGAGGCGGGATTAAGCGTCTCTGCCTGGGAAGCGAAATTCAGGGCAGTAAATTCCCAGCATCCACCACGAACGAATACGGTTAGCAAACGTGACTTCAAACTAGCGAGGTAAATGTCAGCCGAGGACACAAACAGCAGTTTGTGCAGACGATTTTGACGGAGCGGGGCGACATGCTGTGACTGATCGGTGTCCTCCAGTAGCAGCAACAATGTTGCCCTCAACCAGCACCTTGGTCCGGGCTGCTGCCAAGCTGCTGCCGAGGCGAAATTGGAGTCGAGGATGCGTCTGGTGCCCGTGCAGAAACATTTCTGTGAAACCAGGAGGGTTGAAACCAAAGACCGTTCCACCTCGGTACCTGGGCCAGCCCAGCCCTTACACTCATCCACACCTCATCAAACATGGTGAGGTGACTCCAGGCTTGAGCCAGACAGAATACGAGCTCCGCAGACACCGGCTGGCCTCACTTATCGAGGCCCAGTCAGACAGGCTGGGACCCTCTGCCTCCTCTAGCACCCATGTGGTCATCGTGTTGTCCCATCCGACCCGCTACATGACCAATGACATCCCTTATCCCTTCCACCAGAACCAGGATTTTCTCTACCTCAGTGGCATCCTAGAGCCTGACAGTGCTCTGGTTCTTTATGGGAAAGGACGACCAGACCAGGCCATCTTGTTTGTCCCCCGCAGAGACCCGGGGAGAGAGCTGTGGGACGGGCCCCGTTCAGGGAAGGATGGGGCGGCTGCTTTGACCGGCATAGAGAGAGTTCATAGCACAGAAGAACTAGGTGTTGTGCTCAAGTGCCTTAAAGGCACTGTGCTGTGGTACGACAGTTCTCAGCCCGCCCACCCTCGGCTCCACCAGACCCATGTGGTCCCCCTGCTGGAGGCGGGGTCGATGCCGCACTCTCTCAGGCCCCTCGTACACTCTCTTAGGGCCATCAAGAGCTCAGCAGAGGTAGCGCTCATGCAAGAAGCAGGTCACATCACAGCACAGGCTTTTAGGAGGACGATGGCTCTGTCTCAAGGAGACGTAGATGAAGCCGTGCTCTTTGCTAAGTTTGATTTTGAGAATCGGATCCATGGCGCCAACTTCCTGGCCTATCCCCCTGTTGTTGCTGGTGGGAATCGAGCCAATACTCTGCACTACATAAACAACAACCAGATTATCAAGGATGGTGAAATGGTGCTGCTCGATGGTGGTTGTGAATACTTTGGTTACGTCAGTGATATCACTCGAACATGGCCAGTGAATGGAAAGTTCAGTCCTGCCCAGGCGGAGCTGTACGAGGCCGTCCTGGAGGTCCAGCGCTCCTGTTTGTCTCTGTGCTCAGCGGGCGTCAGCCTGGATCACATCTACAGCACCATGCTGGCTCTGTTGGGACGACAGCTCAGGCGGCTAGGCATCGTCAAGGCCAGCACCAGCGACGCTGATGTATTAAAGGCTGCACGACGGTACTGCCCCCACCACGTTGGCCATTACCTGGGCATGGACGTCCACGACACTCCTGAGCTGTCCCGCTCACAACCTCTACAGCCAGGAATGGCCATCACTATCGAACCAGGGTTGTACATCTGTCAGGACAATGACCAGGTGCCAGAGCGCTTTCGCGGCCTGGGCGTCAGGATTGAGGATGATGTGGTGATCCAAGACAAGGGAGGCCCTCTGATCCTGTCCTCTGATGCACCCAAGACCATCGCTGATGTAGAGAAGGCCTGTGCCCAGAGATAGGGCAGGGAGAGGCAGACAAGTGACCAAGTGAGTCACAGGCATCGATGGCAGGCAGCGTGCTGCTCTTTTTCAACCGTCTCCACGGTGATGACATCGTCAAGCTCAGAGCCCAGGTACATGAAAGGTGGGAGCACACAGCAACTTGCAACAAGGCCTCAAAATGTAGAAATCTGGCGTGGAAGATCGTTGATTTTTGTTGTCTAGCTAAATGTTTAAAGAAACCGGTTTCATGTTTGTGAATGATTATGAAGAGCTCATCAACAGTAAAGCGTGGATTTAGTTGAGTGTTAGGCTGCATTCACACCAAATCCGGCATTGCACCTATAAGCAAAGGGTAGTGCAGCGGAGTGGGAGCGTCGCTTAAAATGACCAATCTGTGTCTCCATTGTGTTCCCCATGGTGCTAGCTTTTAGCCATGCTGCTAGTATGCCAGGTCCTACGAGGGTTTCTCTTTCCGTATCGACggatttaaaaaacacattgacTTTTAATAACTAACCAGGATGCAAGGCCTATCGTTACCGAGGGTTTTAAACTGGTGCACAAGGCCAAAGTGAGTAACTATACGTGAAACATATCGTTACACTCCATTGTGTTTTGTCTGAACGCTGGTTACGTTGCTCCTGTTTCTACTTTTCACCGGAGAGTCGCTGAGCTTTTTTCCGGCATCCACTGCAGTCCTCACCGTCGCAGCCTTAACGCAATACCCACATTAAATTAATGGGAAAACTGGCACTTCAGTCGCAATGCCTGATCTGGTGTGAATGCAACCTTATAGTGAAAACACACCGGGTGTGTAAGCATCGCGTAGCGCagctatttttttatattttggcgcccatgttatccaatctgtccgtTCATACCGGGCGCGGAGAGGCCGTGTTGGCCCGTGCACTGCAGCGATCGcgaacacatttcaaaataaaacacctacAGTATGTTCATGGTGATTTTGGTTGTCTTGACCTCACAGTGAGACATGAGATCAGgcacatggagagagagagagacagacagagaggattGCTTTGTGGCTGGCGCACAGAAATATGCGTCCGGTATGAATGGTCAGGCGTGCGATCAGGCACGTGTGCTTTGCGGGCTTTACGCGCCACTTACGCGCTCGGTGTGTTTTCGCTGTTATAGGGGTTACGGTGTGGCTTTGGAGCGTATACTGCGCTGTAACTGCCGTATTTCTCCTCAAAAAGGTAATTACACATCAGGGCTACAGCAAGACAACATGGAGATGAATCTTGATAATGTGTAATACATTCATCTAGTGTTATCATGGTGCTATCAGCGGGTGAAATCTGATGCTGaactataaataaaaacctAGGAACAACCGTTAACCTCCTGCATCAAGTATATATTCAGTTGAAGACCCAGTGGTTAGATCCAACAACCATGGAAGCGTTTTCATTCTTAAAATCGATTTGCTccacatcatctttttttatttttttttttttcagagtttCCACCATTATGGCACACTAGGATAtaatggtttgtttgtttgttctttctctcactaaaaaaaaaacttgtttaaGCCTACGTGCACACACTTCATTTGTCTCCTacacaaaaaaagcataatTATTTCCCAGCTCATGCTGCAGTACAAAAGCTCAAAACACCATTGAACATTCACTCACTGAACTGCAGGAAGGTCAGGAATGACCACATTATGTCAAATCAACAGACCACCATGTACACCATGCACACCAGTGATGAATAAAGATGAACCTGTCTTAAATAGCTGCTCCTGACAAACCTGGTATGATGGTAATGATTACACCAATGCACTCAAATGGCTTAAAAAGTGTACACTGaaaagagtttgtgtgtgtgctgttgtgtcttttcagcagagagaaaaatgtgatctattttaaagaaaatggtGTTTATATGTATTAAAAAGATGAGATCTCTCATTGTATATGTaaatacatacctttttatttcctttttgctGACAAAACAAGGGAAAtggaatcatgttaaataatttaGGCTAGTAGTTGGAGTCCAATATGATGAAAATGAGTGGGTGGCCTATAGTAGCCTTGGACTAAACTCTGTAACTTACCCCAGGACGATGCTATTTGgtttgtggtgctcaaagtCCCGTAAGGAGTTTGgaaaaattaaaactttaacaTTAGAATGACACTGTAACCCACAATATTTCACAGACATTGTCGTGACAGTCTTCATTGAGAATTTAGCCTACTCCACACAGACGAAAGAAAATGTTCAAAGTCTGTAGATTGTTGAATTCTAACACCACAGCCACTGAAAATGCTTGTTTCTGATTTACTGCCACAGTCGGTACATTATTTTTGTTTGCTTTGAGTGTCATGGCTCTTACAACGACTGGATTAACCTGCTAGCAGGCCTGCTGTCCCTCCATCTCTGTGCATTACATACACAACATGGCATCTTAATTATCTTTTGCCCAGAGACCAACCAGTACTTTTCTGTTGGCCCCAGGTTTGCTGTGTGACAATTTTGTGGTAATTTAATTACATGGAATTCAGGAATATGCACCAGTTGATACTGTGCCTTAGTGGTGCATATTCCCAGCACATTTCCAATTTATCACAAATCGATGGATTCAAAGCAAACATGCGGCTTTTGCAACCCCTGGGCATTTGGAGCCTTGTGGCAGTTTTCTGTTTTGGCAAATTGGTAATCCAGTCTAGCCTCACCAACCCTCCCCCAAATAAAACTGTGTGCAGCCATTTCCAGCAAACCA

Function

symbol description
xpnpep3 Predicted to enable aminopeptidase activity. Acts upstream of or within gastrulation. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in nephronophthisis-like nephropathy 1. Orthologous to human XPNPEP3 (X-prolyl aminopeptidase 3).

NR:

description
PREDICTED: probable Xaa-Pro aminopeptidase 3

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0004177 aminopeptidase activity molecular_function
GO:0030145 manganese ion binding molecular_function

KEGG:

id description
K01262 pepP; Xaa-Pro aminopeptidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824484.1 True 4911 mRNA 0.47 12 5479770 5495588
XM_039824485.1 False 4686 mRNA 0.48 13 5478106 5495588

Neighbor

gene id symbol gene type direction distance location
trnaq-cug_13 NA coding upstream 16346 5461689 ~ 5461760 (+)
chadla chadl,LOC103370796 coding upstream 16843 5453643 ~ 5461263 (+)
rangap1a rangap1 coding upstream 25470 5438507 ~ 5452636 (+)
LOC120575346 tob2 coding upstream 82332 5386505 ~ 5395774 (+)
LOC120575092 pmm1 coding upstream 130480 5333449 ~ 5347626 (+)
ep300b LOC100700725 coding downstream 2362 5497950 ~ 5532262 (+)
smcr8a smcr8,LOC102303222,LOC102212603,LOC102782846 coding downstream 72997 5568585 ~ 5578672 (+)
pdap1b pdap1,LOC102785718 coding downstream 87672 5583260 ~ 5587770 (+)
shmt1 shmt1,LOC106933460,LOC107104202 coding downstream 94876 5590464 ~ 5601974 (+)
cpsf4 cpsf4 coding downstream 106880 5602468 ~ 5610464 (+)
G152115 NA non-coding upstream 9011 5466285 ~ 5469095 (+)
G152008 NA non-coding upstream 44980 5367060 ~ 5433126 (+)
G152040 LOC104949869 non-coding upstream 48920 5428395 ~ 5429186 (+)
LOC120575483 NA non-coding upstream 115642 5361570 ~ 5362464 (+)
G152022 NA non-coding upstream 119270 5354830 ~ 5358836 (+)
LOC120575023 NA non-coding downstream 62037 5557625 ~ 5562390 (+)
G152148 NA non-coding downstream 137899 5633487 ~ 5633861 (+)
G152154 tnrc18,LOC102789128 non-coding downstream 176858 5672446 ~ 5673600 (+)
G152179 smurf1 non-coding downstream 298536 5794124 ~ 5830663 (+)
G152201 NA non-coding downstream 378176 5873764 ~ 5874303 (+)
rbx1 rbx1 other upstream 13803 5461939 ~ 5464303 (+)
G152028 aco2,LOC103370792 other upstream 100367 5370950 ~ 5377739 (+)
G152024 NA other upstream 116811 5359654 ~ 5361295 (+)
G151995 NA other upstream 258356 5215685 ~ 5219750 (+)
LOC120575156 LOC102785031,LOC103371174,LOC107096643 other upstream 483585 4975701 ~ 4994521 (+)
G152125 NA other downstream 38268 5533856 ~ 5550546 (+)
slc29a4 slc29a4,LOC107104199,LOC107105090 other downstream 130619 5626207 ~ 5647190 (+)
G152149 actb,LOC107581721,LOC102799139 other downstream 230298 5725886 ~ 5771867 (+)
chst12a chst12,LOC103360067,LOC100699819,LOC101072910 other downstream 454836 5950424 ~ 5957317 (+)
dexi dexi,LOC107590611 other downstream 1774540 7270128 ~ 7274611 (+)

Expression


Co-expression Network