trnaq-cug_13


Basic Information

Item Value
gene id trnaq-cug_13
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 5461689 ~ 5461760 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_718
GGTTCCATGGTGTAATGGTTAGCACTCTGGACTCTGAATCCAGCGATCCGAGTTCAAATCTCGGTGGAACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_718 True 72 tRNA 0.50 1 5461689 5461760

Neighbor

gene id symbol gene type direction distance location
chadla chadl,LOC103370796 coding upstream 426 5453643 ~ 5461263 (+)
rangap1a rangap1 coding upstream 9053 5438507 ~ 5452636 (+)
LOC120575346 tob2 coding upstream 65915 5386505 ~ 5395774 (+)
LOC120575092 pmm1 coding upstream 114063 5333449 ~ 5347626 (+)
LOC120575090 NA coding upstream 152097 5303860 ~ 5309592 (+)
xpnpep3 xpnpep3,LOC102784555 coding downstream 16346 5478106 ~ 5495588 (+)
ep300b LOC100700725 coding downstream 36190 5497950 ~ 5532262 (+)
smcr8a smcr8,LOC102303222,LOC102212603,LOC102782846 coding downstream 106825 5568585 ~ 5578672 (+)
pdap1b pdap1,LOC102785718 coding downstream 121500 5583260 ~ 5587770 (+)
shmt1 shmt1,LOC106933460,LOC107104202 coding downstream 128704 5590464 ~ 5601974 (+)
G152008 NA non-coding upstream 28563 5367060 ~ 5433126 (+)
G152040 LOC104949869 non-coding upstream 32503 5428395 ~ 5429186 (+)
LOC120575483 NA non-coding upstream 99225 5361570 ~ 5362464 (+)
G152022 NA non-coding upstream 102853 5354830 ~ 5358836 (+)
G151851 srebf2 non-coding upstream 576367 4884684 ~ 4885322 (+)
G152115 NA non-coding downstream 4525 5466285 ~ 5469095 (+)
LOC120575023 NA non-coding downstream 95865 5557625 ~ 5562390 (+)
G152148 NA non-coding downstream 171727 5633487 ~ 5633861 (+)
G152154 tnrc18,LOC102789128 non-coding downstream 210686 5672446 ~ 5673600 (+)
G152179 smurf1 non-coding downstream 332364 5794124 ~ 5830663 (+)
G152028 aco2,LOC103370792 other upstream 83950 5370950 ~ 5377739 (+)
G152024 NA other upstream 100394 5359654 ~ 5361295 (+)
G151995 NA other upstream 241939 5215685 ~ 5219750 (+)
LOC120575156 LOC102785031,LOC103371174,LOC107096643 other upstream 467168 4975701 ~ 4994521 (+)
G151830 ndufa6 other upstream 632680 4824253 ~ 4829009 (+)
rbx1 rbx1 other downstream 179 5461939 ~ 5464303 (+)
G152125 NA other downstream 72096 5533856 ~ 5550546 (+)
slc29a4 slc29a4,LOC107104199,LOC107105090 other downstream 164447 5626207 ~ 5647190 (+)
G152149 actb,LOC107581721,LOC102799139 other downstream 264126 5725886 ~ 5771867 (+)
chst12a chst12,LOC103360067,LOC100699819,LOC101072910 other downstream 488664 5950424 ~ 5957317 (+)

Expression


Co-expression Network