G179405


Basic Information

Item Value
gene id G179405
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 31297632 ~ 31298456 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU242906
GTCAGACGATCCATAACGGCTCGAGCAATGGGGCTTCGACCAAACACTTGTATGTCGCGCAGGAAATACTTGAGTCCCACAAAATCCTCAGTGCCGAGATCGTCCAAGATGGCGAGTATCTCTCCGGACACCTCGGGTGCTGCGGCCGAGCCACAGAAGACGTTGTGGTTGTGGTTGTCCTCCCAGGTTTGCATAAACGTCTTACAAACACCATTGCCCTTCTTCCTTGCATGGTCGATCAAGGCCCTAGCCCTGTCCCGAGTGCCTCTCATAGCCTGGATGTACTCCAACTCTTCACCTGATATCATCTCGTGATGCAACAGAACATCGGCCACGTAGTTCACTCTGGCCATGTTACTGGCCTCTATGTAGCTGAGTCTTTTTCGGGTAAGACTTTCCATGGTAAGATActctgtgtgaggccacattcaAGATTGTTAGACGGTGGATGCTTGTTTGGACATGTGTGTCTTTCATAAAGTAAAACGGgagaccctctctctctctctctctctctctctctctcgctctctctctctctctctggttcctTACACACGTTCTGCTCACTGCTCCAAATAGTGTAAAGacacttgatttaattcttactcagtccctcatttcaaacgcatctgTGGCATGTTCTGTCGctgtctgcttcagtctttATACTATTGTAAGGGGGGTGTGGTTAGGAAAATTCTGGAACGGGGCGTAGTTTGGAAACTTCTGGAAAAAAGGTGTGGTATGGAAGCGTTCTGGgcgtggtaaaaaaaacaaaacaaaaaaacactgttgttttctttgaattcagttttatgaggG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU242906 True 825 lncRNA 0.47 1 31297632 31298456

Neighbor

gene id symbol gene type direction distance location
sept5b LOC103356565,LOC105913293 coding upstream 57594 31202551 ~ 31240038 (+)
acads acads coding upstream 145465 31126459 ~ 31152167 (+)
crybb1 crybb1,LOC101477459 coding upstream 174427 31115852 ~ 31123205 (+)
slc4a5b LOC102799615,LOC102199953,LOC101477060,LOC107395321,LOC102294077,LOC108245384 coding upstream 614558 30587007 ~ 30683074 (+)
scarb1 NA coding upstream 755099 30511961 ~ 30542533 (+)
mctp1b LOC103356564,LOC102203739,LOC101478578,LOC102777952 coding downstream 4689 31303145 ~ 31402967 (+)
LOC120545075 LOC103356563,LOC102778235,LOC100706525,LOC101479232,LOC102204790,LOC107394700 coding downstream 129711 31428167 ~ 31458606 (+)
LOC120546097 NA coding downstream 499775 31798231 ~ 31800033 (+)
LOC120544976 NA coding downstream 543669 31842125 ~ 31844197 (+)
LOC120545076 NA coding downstream 557524 31855980 ~ 31858839 (+)
G179308 NA non-coding upstream 13267 31283948 ~ 31284365 (+)
G179298 NA non-coding upstream 19294 31236575 ~ 31278338 (+)
G179293 NA non-coding upstream 53982 31189005 ~ 31243650 (+)
G179297 NA non-coding upstream 60502 31217812 ~ 31237130 (+)
G179288 NA non-coding upstream 71278 31224826 ~ 31226354 (+)
G179430 NA non-coding downstream 104614 31403070 ~ 31403841 (+)
G179433 NA non-coding downstream 118475 31416931 ~ 31423163 (+)
G179438 NA non-coding downstream 132501 31430957 ~ 31432216 (+)
G179440 NA non-coding downstream 140066 31438522 ~ 31479273 (+)
G179410 NA non-coding downstream 162962 31461418 ~ 31462196 (+)
LOC120545414 LOC106676976 other upstream 966018 30324112 ~ 30331614 (+)
zmiz2 zmiz2 other upstream 986738 30259366 ~ 30310894 (+)
G178881 NA other upstream 1275415 30021319 ~ 30022217 (+)
LOC120545429 LOC104948058 other upstream 1501807 29793804 ~ 29795825 (+)
G178845 NA other upstream 1547337 29742623 ~ 29750295 (+)
G179407 NA other downstream 89291 31387747 ~ 31480094 (+)
LOC120545154 hapln1,LOC101070352,LOC100699000,LOC101480665 other downstream 266789 31565245 ~ 31653583 (+)
LOC120544927 NA other downstream 513273 31811729 ~ 31832260 (+)
LOC120545711 NA other downstream 761469 32059925 ~ 32078010 (+)
G179655 cox5b,LOC106567989,LOC106563057 other downstream 780721 32079177 ~ 32099542 (+)

Expression


Co-expression Network