G53627


Basic Information

Item Value
gene id G53627
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 27700205 ~ 27700504 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU71686
ACTCTGCTGCTCGCCTCCTCACCCACACCGGTTCAAGACAACACATCACCCCTGTCCTTCAACAgcttcactggctccctgtaCAACAGCGCATCCATTACAAAGTTCTTCTCATCACCTACAAAGCTCTCAATAATCTGGCCCCTCCATACCTCACAGACCTCTTACAGCACCATCGCCCCTCCAGATGCCTTCGCTCAGCAGACTTAAACCTCCTCAAACCCATCACCAAATCAACCCACCGAACTTTGGGGGACCGAGCCTTTGCAATAGCTGCCCCCACCCTCTGGAACTCACTCC

Function

NR:

description
PREDICTED: receptor-type tyrosine-protein phosphatase zeta-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71686 True 300 lncRNA 0.54 1 27700205 27700504

Neighbor

gene id symbol gene type direction distance location
arih2 arih2,LOC102785176 coding downstream 56210 27628180 ~ 27643995 (-)
impdh2 impdh2,LOC102785462 coding downstream 78035 27604238 ~ 27622170 (-)
dalrd3 dalrd3,LOC102786329 coding downstream 113704 27576174 ~ 27586501 (-)
celsr3 celsr3 coding downstream 165331 27417463 ~ 27534874 (-)
wdr6 NA coding downstream 288402 27405416 ~ 27411803 (-)
borcs6 si:dkey-72l14.4,LOC107717508,LOC107669648,LOC107556497 coding upstream 24008 27724512 ~ 27733526 (-)
sema3h NA coding upstream 41335 27741839 ~ 27804126 (-)
rhoab LOC107099133,LOC104942029,LOC100707445,LOC102225527,LOC103154003,LOC108233110 coding upstream 113645 27814149 ~ 27829550 (-)
tmem115 tmem115 coding upstream 133214 27833718 ~ 27842985 (-)
LOC120559481 dnajc16 coding upstream 612565 28313069 ~ 28319508 (-)
G53621 NA non-coding downstream 35093 27664038 ~ 27665112 (-)
G53619 NA non-coding downstream 55610 27644176 ~ 27644595 (-)
G53608 NA non-coding downstream 104880 27559421 ~ 27595325 (-)
LOC120558937 NA non-coding downstream 394639 27302392 ~ 27305566 (-)
G53540 NA non-coding downstream 445047 27253608 ~ 27255158 (-)
G53665 NA non-coding upstream 18813 27719317 ~ 27724212 (-)
G53671 NA non-coding upstream 28324 27728828 ~ 27754194 (-)
G53736 NA non-coding upstream 497948 28198452 ~ 28198718 (-)
G53768 LOC107716147,LOC107737696,LOC104954971 non-coding upstream 621222 28321726 ~ 28322205 (-)
G53799 NA non-coding upstream 643157 28343661 ~ 28423368 (-)
xpc xpc other downstream 39559 27644783 ~ 27660646 (-)
hyal3 LOC103359396 other downstream 500294 27189048 ~ 27199911 (-)
ifrd2 ifrd2,LOC104928016,LOC104966933 other downstream 528973 27157588 ~ 27171232 (-)
G53444 sema3g other downstream 734182 26961347 ~ 26966023 (-)
selenok selenok other downstream 905115 26792452 ~ 26795090 (-)
LOC120558759 NA other upstream 144760 27845264 ~ 27930515 (-)
LOC120559779 LOC104918355,LOC103374204,LOC103385013 other upstream 452678 28153182 ~ 28186527 (-)
ajap1 ajap1 other upstream 1270782 28971286 ~ 29029321 (-)
LOC120559896 slc25a45 other upstream 1649574 29350078 ~ 29355884 (-)
clcnk clcnka,LOC104952128,LOC102786725 other upstream 1773999 29474503 ~ 29492975 (-)

Expression


Co-expression Network