impdh2 (impdh2,LOC102785462)


Basic Information

Item Value
gene id impdh2
gene name impdh2,LOC102785462
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 27604238 ~ 27622170 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800045.1
CGGAAACGCTGTCAGACGGGAATAATGCACGTGTCTGAGGAACTGTAGGAAGAGCAGCGCTCAGCTTTGGCTGGCATAGAGGCCTGAAAAGGCATACATACCGTCATACCGACATTTTTTGTTCAGTTCCCGGCCGTTAACAGAGAGTCCGGACAGAACTATTCCCGGCTGCTCAGAGGCGCACGGAGCAGGACGACGGGTGGGTAGCAGCACACGGGGCGAAAGAAGAAAGTTCTGGCTCTCTGTTCCCGGGCctctgtgttgtctgtctgtgtatccgCAGGAGCTTGTTAAATTCATTTCTTAATAGTTTAAAACTGAAGGACTGGCTAGGGCTTATTGGACGTCATGGCGGACTACCTGATCAGCGGGCAGACCGGTTACATCCCCGATGATGGGCTGTCGGGACAGCAGCTGTTCAACGGAGGAGACGGGCTCACTTACAATGACATCCTGATTCTGCCGGGCTACATCGACTTCACATCAGACCAAGTGGACCTGACCTCAGCGCTCACCAAACAAATCACCATGAAAACTCCCTTAGTCTCCTCTCCCATGGACACGGTCTCAGAGGCCAACATGGCCATCGCTATGGCACTAACGGGTGGCATCGGCTTCATCCACCACAACTGCACTCCAGAGTTCCAGGCCAATGAAGTTCGCAAAGTCAAGCGTTATGAGCAGGGCTTCATCACAGACCCTGTAGTGATGAGCCCCAACGAGCGCGTTCGGGATGTCTTCCAGGCCAAGGCTCGCCACGGCTTCTGTGGAATCCCCATCACAGACGACGGCAAAATGGGCGGCAAGCTGGTGGGCATCATCTCTTCCAGAGACATCGACTTCCTGAAGGAGGAGGACCACAACTTGCCACTAAGCGAGGTGATGACAAAGAAAGAGGATCTCGTGGTCGCCCCTGCTGGAGTGACGCTGAAAGAAGCCAATGAAATCCTCCAGAGGAGTAAGAAAGGTAAGCTGCCTATAGTGAATGAAGAGGGGTCCCTGGTGTCCATCATCGCCCGCACAGACCTGAAGAAGAACAGAGACTTCCCTCTGGCCTCCAAAGACTCGCGCAAACAGCTGCTGTGTGGCGCCGCCATCGGCACCCACAACGACGACAAGTACCGACTGGACCTGCTGGTGCAGAGCGGGGTGGATGTAGTTGTACTGGACTCATCTCAGGGCAACTCGATCTTCCAGATCAACATGATCAAATATATCAAAGAAAAGCATCCAAGCCTACAGGTCATCGGAGGCAATGTGGTGACTGCAGCTCAGGCTAAGAACCTGATAGATGCAGGAGTGGACGGACTTAGAGTGGGGATGGGCAGCGGCTCCATCTGCATCACACAGGAAGTGCTGGCGTGCGGCAGACCCCAGGCGACGGCTGTCTATAAGGTATCGGAATACGCCAGGCGTTTTGGTGTGCCTGTCATCGCCGATGGTGGCATCCAGACTGTCGGGCACATTGCCAAAGCCCTGGCACTGGGAGCATCCACAGTGATGATGGGCTCTCTGCTGGCTGCCACCAGCGAAGCTCCTGGTGAATATTTCTTCTCGGACGGCATCAGGCTGAAGAAATACCGCGGCATGGGCTCCCTGGATGCCATGGACAAAAACCTGGGCTCCCAGACCAGATACTTCAGTGAGTGCGATAAGATTAAAGTTGCTCAGGGTGTTTCTGGAGCGGTGCAGGACAAAGGCTCCATCCACAAGTTTGTTCCCTACCTGCTGGCTGGCATTCAGCACTCGTGTCAGGACATCGGAGCCAAGAGCCTCACACAACTCAGAGCCATGATGTACTCTGGAGATCTGAAATTTGAAAAGAGAACCACGTCAGCCCAAATGGAGGGTGGCGTCCACAGCCTTCACAGTTATGAGAAACGTCTATTTTAAAAAGAAGACCAGCCGTTCAGCCTGCAGATGGAGAAACCTTCCAACTGACACATTATGCAAACACTACATGCCAGATCCTCTTAAATGtattctccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaacagaaaaatACATACAAGCGTTCACCCACTCTACCCTTCCAAGGATTCATCAAGTCTTCCTGCCAGTGTCATCTATGCATTTTTCATGTTtagtgtagctgtgtgtgtttgtgtgtgaaggaGGGGAACCAAGCATTTATCAATCAGTGCACGTGTGATTGAGTCCTCCAATGCCTTTTCatgttgtgattaaaataaatgtctggCGTGTCCATTTTAAGGAAAAAAAGTTGTCCAATAATAAAGCTTATGTGTTTTTCCACGA

Function

symbol description
impdh2 Predicted to enable IMP dehydrogenase activity; metal ion binding activity; and nucleotide binding activity. Acts upstream of or within circadian rhythm. Predicted to be located in cytoplasm and nucleus. Is expressed in several structures, including digestive system; immature eye; mesoderm; muscle; and nervous system. Orthologous to human IMPDH2 (inosine monophosphate dehydrogenase 2).

NR:

description
inosine-5'-monophosphate dehydrogenase 2-like

GO:

id name namespace
GO:0006177 GMP biosynthetic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0003938 IMP dehydrogenase activity molecular_function
GO:0046872 metal ion binding molecular_function
GO:0030554 adenyl nucleotide binding molecular_function

KEGG:

id description
K00088 IMPDH, guaB; IMP dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800045.1 True 2319 mRNA 0.52 14 27604238 27622170

Neighbor

gene id symbol gene type direction distance location
dalrd3 dalrd3,LOC102786329 coding downstream 17737 27576174 ~ 27586501 (-)
celsr3 celsr3 coding downstream 69364 27417463 ~ 27534874 (-)
wdr6 NA coding downstream 192435 27405416 ~ 27411803 (-)
LOC120559858 LOC102789366 coding downstream 207878 27381245 ~ 27396360 (-)
LOC120559857 slc26a6,LOC101470130 coding downstream 223707 27342161 ~ 27380531 (-)
arih2 arih2,LOC102785176 coding upstream 6010 27628180 ~ 27643995 (-)
borcs6 si:dkey-72l14.4,LOC107717508,LOC107669648,LOC107556497 coding upstream 102342 27724512 ~ 27733526 (-)
sema3h NA coding upstream 119669 27741839 ~ 27804126 (-)
rhoab LOC107099133,LOC104942029,LOC100707445,LOC102225527,LOC103154003,LOC108233110 coding upstream 191979 27814149 ~ 27829550 (-)
tmem115 tmem115 coding upstream 211548 27833718 ~ 27842985 (-)
G53608 NA non-coding downstream 8913 27559421 ~ 27595325 (-)
LOC120558937 NA non-coding downstream 298672 27302392 ~ 27305566 (-)
G53540 NA non-coding downstream 349080 27253608 ~ 27255158 (-)
LOC120558995 NA non-coding downstream 388992 27213532 ~ 27215246 (-)
LOC120559521 NA non-coding downstream 785668 26817017 ~ 26818570 (-)
G53619 NA non-coding upstream 22006 27644176 ~ 27644595 (-)
G53621 NA non-coding upstream 41868 27664038 ~ 27665112 (-)
G53627 NA non-coding upstream 78035 27700205 ~ 27700504 (-)
G53665 NA non-coding upstream 97147 27719317 ~ 27724212 (-)
G53671 NA non-coding upstream 106658 27728828 ~ 27754194 (-)
hyal3 LOC103359396 other downstream 404327 27189048 ~ 27199911 (-)
ifrd2 ifrd2,LOC104928016,LOC104966933 other downstream 433006 27157588 ~ 27171232 (-)
G53444 sema3g other downstream 638215 26961347 ~ 26966023 (-)
selenok selenok other downstream 809148 26792452 ~ 26795090 (-)
dcp1a dcp1a other downstream 945917 26646814 ~ 26658321 (-)
xpc xpc other upstream 22613 27644783 ~ 27660646 (-)
LOC120558759 NA other upstream 223094 27845264 ~ 27930515 (-)
LOC120559779 LOC104918355,LOC103374204,LOC103385013 other upstream 531012 28153182 ~ 28186527 (-)
ajap1 ajap1 other upstream 1349116 28971286 ~ 29029321 (-)
LOC120559896 slc25a45 other upstream 1727908 29350078 ~ 29355884 (-)

Expression


Co-expression Network