dalrd3 (dalrd3,LOC102786329)


Basic Information

Item Value
gene id dalrd3
gene name dalrd3,LOC102786329
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 27576174 ~ 27586501 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800992.1
TCCAACACGGAAATTTACCTCGGAAGAAACACGGATTGTACTTCACTAGTTCCGCAAAGAAAGAAACAGCCAATGCAGTCCCCATTTACAGCCAATATCTGACATCGATCAGTGATTACCCGTACGGCTGGAAATTGGCTTGTAATTCGACAGTGTTGGAACGTAGCATAGCCTGCATCAGCACCGATCAGTGAGACAGCGTTGGAACAGAAGATATGAGCAGGGTGTGGATGTGCTGTTGATAGCCTGGTAGTAAGCTCACCTGTGTAGCTATATTTTGTGGTGGTGATGGAGAATATCGAGGAGTCTTCGCCCCTCCGGATCACCCCTACCGTCCGGGCGCTGAGCTCCGCACTGCGGGGGAAGCGTGAAAATGTCCCCGATTCCAGCCGGGAAAACGGCGACAGGATCTTCCCTGAACCGGAGAAGCTTTGGTTCAAGGAGAGCAGCGCTAAAAACCTGCGTAACAGGGACTTCTTGTCGCCGACCACGATGCTTAACACGCTGTATGCAGACGGACAGGTCCCTCCAGCAGTGATGTCCAGGGTCCTGTCCCTCCGTGGCAGTGGGGTTCTCCCTGTGGCTGGTGGGGAGGTAATGGGTGAGGGGTTGAGGGTGAGGGTGGACCGGGCCGCAGCCTTCCGGTCTGTCCTGGCGGATGGAGCCACAGAGTACCTGAAGCCCTCTAGTCAGAGGCAAGGCTGTGTGGTGCTCAACTGCCCTGCACTGCACCCTAAACCCAACACACCCACTCCTGAAACACTGACTCTGGGCCAGCTGAGGACTGTTCTGTTGGCTGACCACATGGGGGAGCTGTTGAGAAGACAGGGATTTGCAGTCTCTTATTGCCCCACTCTTCCTGAGGAAAGCGACATCGTCACCTTTCTCCGAGCTCTGGGCATCGATTGGCCGACAGCCCCGGCCAACTGGACCAATGAGGAGCGGGAGGAGAAGATTCAGGATGCGCTGGAGAACTCCCTGTACAGAGAAAGGGAAACAGAAAGAGGCAGGAGGAccagcggaggaggaggagggagcaaggtggaggagggggagaaCGAGGGAGCACTCAGGGTCAACCTGAAACGAGTGTTCCAGGAGGAGGGGCTGCTGGGATACGACCCCAGCCTTGGTACCTGCATAGTACACAGAGACAGTGTTTCCCACCTGGCTCAACTGGACCTCGCCACTGCCGACTACACAgtAGCCATGGCAACAGCATTACATGTGACTTCCTGTCAGGATGAGTTCCGCCAGCAGCAGATAGCAGTGCTGTGGAGAGCCAGTggagcgacacacacacagAGACATCTGGTGTGTGGGCCTGTAAAGACTCCTGGTTCTCACCTCACTGCTGCACAATATCTGCAGCTGAGAAGAGGTCAGATGAAGGAGGCCTCAGAGATGAAGTATGGAGATCAAgtagaagGTCAGACATgggatgacatcatcagggtcaTGACCTCTGCCACTGTAAGATTTGAGCTGCTGTCAACGGTCCACACCAGTCCTGTGACACTGGATGTCCAGAGGGAAGGGGGAGTGTCTACCAAAGGGCCGCGAGGAGGAGTGTTTGTGATGTATAACTGTGCCAGACTACACACTCTTTTCGACAGCTACGAGAGAGGAGTAGAGAAGGGTCTATACCCAGAAATCCCTGAAGGCTCCCAGCTAGACTTCTCTGCTCTGAAAGAAGAGGGCGAGTGGCTTCTCCTGTTCAATTACCTCATACCGTTCTCCGAGCTGCTGGACCAATCAGGACAAGCGTTAGACTGTGAAGGGGGAGGAGCCAGAGTCAATATTAAGACTGAGCAGaTCTGTAAATTTCTCGTGTCTCTCAGTAAAGACTTCAGCTCGTACTACAACAGAGTCCATGTGCTGGGGGAGCCGTTGCCTCACCTCTTCAACCAGATGTTTTGTCGTTTGCATCTGTTGAGAGTGTTGAGAGAGCTCTACCACAGCGCGCTGGACACCCTTAACCTTCCCCCCATCAGGCAACTATAGCCTCGATATATTTCACTCATCTTGTGATCACTGTTGGCCCTACATCCCCACCcatctcacacaaacacacactcgctTATGTTTTGCAATTGTAGTTCATCACATACACACTTCTTTTAGCAATGAAAATGTATTCGATATAGACACATAGTCAGTCACCTTTCCCTCTTTTTGACAATGTTACAGCACAGTTTGTGGCTGTTGGTCAATAATGAGATATTGTTTTACCTGCCCACTGTCAGTGATAACTACAGCTTGACATACTGTAactgttaaaatatttaaaggaTGTCATTACCCACAAATAATGTAATGTGACGTCCGCGAACTCAGCACACTGTGAGTTCAGTTTGATCTGGGCAGATTGGTTTTCCTGGAAAATATGAGCTGTTTGTatgttaaagaaatagtttgacattttaagaagTATACTTCTTTGTTTCTAACTGAGAGTTGGAGGAAAAGGTGAATACCTATCTGATGTCTGtgcagtaaatatgaagctacaccCAGCAGCCGGTTGACTtggcttagcataaagactggaagcaggggaaaacagctagcctgtctCTTTGTCCAAAGGTAGCAATCAGCAGTTAGCACGTTACATCTTGTAATTTGTacaaaaagtgaaaacattgggcactcagagagcgcagacctccgccaaggcatgCCCTCACAATGTAAATGCAGTGTGACTTTTCCCAGTCAGGAACTTATTTTTCAGATTATtctgacaccacatgaatgcagcacaaatgccctatctcacaatgtcAACGAAAGTGAAAACTAATTTGTGTATCCACCCTGTGATTCAGatccgctccaaaatgtaaCGGTTTCTTCCTTGGCCcgtgctacacccttccaccatgtttcatgaaaatcgggccagtagttttttttacagacGGGCAGGCaaacagatatatatattttccaaaatgtcaaattatttcTTTTAAGTTTGGATTTCTTTGTTAAATTTGTACGGAAAAGATTTCCCTCTCATAAGCGTACCAACTGCCAAACAGGCCAAATCTAGAGTGTCTCAGTTAGCAAAGCTgggctgctttttttttctgttgaatCCCTACTTTTTTCAATTCTGCTTTAATCATGTCACCATACAGGACATTCATATGCCCTTTGAGCGAACAACCCACAAAACTGTGCCAGACAACTTGTTACTTTACTGATTTTTGGTGCCAAAATCCCACCAGTTGTCAAGACACCCCATTTAAACTGTAATAAGTATTGTTAAACCTTCTAAATTGCTTCATTATTATCACAGTAACCCCCCCACAGCCTGATGCTAACAATCTCTCCTCTTTGAAACACGTCTTAGTCACTGCTTGTACAAAATTGTTTTGCTTTTATTAAGCCTTTAATAAACTTTTGAAGGTCCCATTTCATGTATGTTACCCACCATGTATTTATCAGTgccacacaaatatttattgtcattttaaaaagtacagaATATAGTCTGCTTATTGAGTCTTAATTGTTGTGTTCATGTGATTATTCAGAGCCCTCAAATCACAGTTATCCTGCTTGACCAATCACAAATGTTCACTATCAAACATGTACCAGATATATAACCGGTGTTCATAAGTTATTGACAAAAAACAGTACCTAGCAGCATTTAGGGCATTGTGCCATAATGTTAGGAAATGcatgaaaataatatatatgaAAAGTTTTATGCcaaaaaatgttatttataaaTTTTGGTAATAAAAATGGATCCttgaaatgtgaaatgtgttCCCATTTCAGTTACCTGCTGTCTTAAAATGTGCCATAGCTTGTTTTAACTTTCTGCTCCACATTATTTTGTaagttggtgtgtttttttgtttttttaaagtgaatatCTCATGTTGGAACTAAACGGTTAACGTACACAGGAATCAAATATCTTACTCACTTCTCACTGCATGAAATGTTTGACCCCTTGCAAATGTTGCTTGTCCCTGAATGGTCTATGGATTTTttaatgaacttttttttttttacattttactttctATAGAAAAGGGAATGGGATGTTTACAATATGttcatttatttacagtaactGTCTTATTATCCAAGCTGTAATTACCACAGTATTAAAGCAGGAGAGATGCAGAATGAaagactttgttttttttcttccctacCTTATACTGTTCATTGTCTCACTGTATCTGTAAcacatatactatataatacatacagtatgttcactTTAGCCATTGGTGTGTTTCTCTTGCTGCCGTGTTTTCACCCCTCAGGTCTCAACATCTCTGACCTCCCATCTCTCATtcttttctccctcctctctgctaCCCTAATAACTCCTATACCTCTCTGCTAAGAGCCCTCATATGCCTCATATATCCTGTACTGTATTATTCCACTGGTTTTTGGAAATTTAAGTACTTTCATATCCTTTTTCTTCAAGGACATGATGAAAATCAGAATGAAGAGTTTTCAGCTGGAAACCAAATAGCTACAAGATGACTCAATAGCTTATAGACATGTTTGCTGTATATCACACAtactgtaatgcaacattttgtGAGTAAACCAGTATCAAAACAGAaataacacacacgcacatagctGTGCCTCTTACCCTCAA

Function

symbol description
dalrd3 Predicted to enable ATP binding activity and arginine-tRNA ligase activity. Predicted to act upstream of or within arginyl-tRNA aminoacylation. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 86. Orthologous to human DALRD3 (DALR anticodon binding domain containing 3).

NR:

description
DALR anticodon-binding domain-containing protein 3-like

GO: NA

KEGG:

id description
K24973 DALRD3; DALR anticodon-binding domain-containing protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800992.1 True 4645 mRNA 0.44 13 27576174 27586501

Neighbor

gene id symbol gene type direction distance location
celsr3 celsr3 coding downstream 41300 27417463 ~ 27534874 (-)
wdr6 NA coding downstream 164371 27405416 ~ 27411803 (-)
LOC120559858 LOC102789366 coding downstream 179814 27381245 ~ 27396360 (-)
LOC120559857 slc26a6,LOC101470130 coding downstream 195643 27342161 ~ 27380531 (-)
mgll mgll coding downstream 235202 27255981 ~ 27340972 (-)
impdh2 impdh2,LOC102785462 coding upstream 17737 27604238 ~ 27622170 (-)
arih2 arih2,LOC102785176 coding upstream 41679 27628180 ~ 27643995 (-)
borcs6 si:dkey-72l14.4,LOC107717508,LOC107669648,LOC107556497 coding upstream 138011 27724512 ~ 27733526 (-)
sema3h NA coding upstream 155338 27741839 ~ 27804126 (-)
rhoab LOC107099133,LOC104942029,LOC100707445,LOC102225527,LOC103154003,LOC108233110 coding upstream 227648 27814149 ~ 27829550 (-)
LOC120558937 NA non-coding downstream 270608 27302392 ~ 27305566 (-)
G53540 NA non-coding downstream 321016 27253608 ~ 27255158 (-)
LOC120558995 NA non-coding downstream 360928 27213532 ~ 27215246 (-)
LOC120559521 NA non-coding downstream 757604 26817017 ~ 26818570 (-)
LOC120559916 NA non-coding downstream 775020 26797405 ~ 26801154 (-)
G53619 NA non-coding upstream 57675 27644176 ~ 27644595 (-)
G53621 NA non-coding upstream 77537 27664038 ~ 27665112 (-)
G53627 NA non-coding upstream 113704 27700205 ~ 27700504 (-)
G53665 NA non-coding upstream 132816 27719317 ~ 27724212 (-)
G53671 NA non-coding upstream 142327 27728828 ~ 27754194 (-)
hyal3 LOC103359396 other downstream 376263 27189048 ~ 27199911 (-)
ifrd2 ifrd2,LOC104928016,LOC104966933 other downstream 404942 27157588 ~ 27171232 (-)
G53444 sema3g other downstream 610151 26961347 ~ 26966023 (-)
selenok selenok other downstream 781084 26792452 ~ 26795090 (-)
dcp1a dcp1a other downstream 917853 26646814 ~ 26658321 (-)
xpc xpc other upstream 58282 27644783 ~ 27660646 (-)
LOC120558759 NA other upstream 258763 27845264 ~ 27930515 (-)
LOC120559779 LOC104918355,LOC103374204,LOC103385013 other upstream 566681 28153182 ~ 28186527 (-)
ajap1 ajap1 other upstream 1384785 28971286 ~ 29029321 (-)
LOC120559896 slc25a45 other upstream 1763577 29350078 ~ 29355884 (-)

Expression


Co-expression Network