LOC120559858 (LOC102789366)


Basic Information

Item Value
gene id LOC120559858
gene name LOC102789366
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 27381245 ~ 27396360 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801907.1
TTCGTGGTGATACAGATTAGGTCAGccactctctctcactgcttAGGTTCGTTTGGTTATCTCTACAGTTACTACTTGTCTTCTTTGTTATGTAACTtcatacatacattttacacacaaagaAAAGTGCACAAGACACATAATGGTAAACACACACCCACTATTGTGAGAAGAAAAAAGTAATACTTGACTGTACTGCCAATAATCTTTGCCAGATGGACAGCGTTGAGCGAATTGGCTTTCCTCACTACAGGCAGCCTTATCTTGCTGTCGCACTGGACGAAGCCCAGCTTGATGCCCTTGGACAGCGGGTAGAAAAGAAGTCCCTGTCATTTCTGGAGAAGGTGAAGGCACAATGTTGGTGTTCCGGTCCCAGGATGAAGAGCTTCCTACTGGGCTTTTTTCCTGTCCTGTCATGGCTGCCTCGATACTCCATCAGAGAAAACGCCATTGGAGACCTTGTGTCTGGAGTCAGTGTCGGGATGATACAGCTGCCACAGGGTATGGCCAACGCCATGTTGGTGGGAGTTCCTCCAGTGTTTGGTCTCTACACATCTCTCTATCCTCTGATCATTTACTTCATCTTTGGCACCTCCAGACACCTCTCTATTGGTACTTTTGCTGTCCTGGCTATAATGATTGGGTCTGTGACAGCCAACGTGGAGTTGCATAGCAACGACGTTGAAGAGAGTCAGATTGATGCGGAAGCGGCCAAAGTGAATGTGGCTGTACAACTCACCTTCCTCTGTGGCCTCATAcagCTCTTACTGTACCTGCTGCGTGGAGGCAGTGTGTGTCGCTGGCTGTCTGATCCTGTAATCAGAGGCTACACCACAGGAGCAGGTCTGCATGTGATCGTCCTGCAGCTGCCGCTGATGACTGGAATACCTGCACAGAGACATACTGGACTGCTGGCTTCAGTTTGGACTTTAAAGGATGTTCTGCATGGAGTGACCAGTGCTGTACCAGGAACGCTGTCAGTCTCCGCGGTTTCCATGGTAATACTCATCGGAGGCAAGATGCTGAATGAGCGCTTTAAGAACAAGCTGCCTGTCGCCATACCATGGGAACTGTTACTGatTGTCCTGGGCACCATCCTGTCAGTGCAGATGGATCTGGTTGGACAGCACACAGTCCAGGTGGTGGGACACATACCCAGTGGCCTGTCTTCCCCAgtccttccatctctctctcaggcCAGAGAGCTGTTCATTCCAGCTCTGTCTGCAGCTCTGGTCGGCTTCAGTTTCCTCTCAGCCATGGGCTCCGTGTTCGCCCACAAACATGGCTACCATGTAGACTCCAGTCAGGACCTGCTGGCTCTGGGTCTATGCAACACCATAGGAGGAATGTTCCAGTGCTTCGCTGTCAGCTGCTCCTTCTCTCGCAGTATGGTCCAGGATAGCATTGGTGTCAAATCACAGATGGCCGGTTTGGTATCAGCTCTGGTGATTCTAACTATCCTGTTGAAGATTGGTCCCCTCTTTGAGCAGCTACCAAAGGCGGTGCTGGCAGTGATCATCGTGGTGAACCTGCAAGGGATATTGGCTCAGTtcaaagatgtgtgtgtgctctggaAGTCTGACAGATTAGACCTGATGGTGTGGATAGCCTCGCTGATTTCAACGCTGGTCTTTAACCTGGACCTGGGTCTGGCTGTGACTGTTGTCTTCTCTCTGCTCACACTCATCTACAGGACACAACACGCCTCCACTGTTGTTTTGGGTCATATTCCTGGTACAGACTGTTACAGAGATGTGGGACTCTACACTGAGGCAAAGCAAGTTCCCGGGGTGACCATACTCTCCTATACCAGTCCTATTTACTTTGCCAACTCTGAACTTGTCTTCACACAGATCAAGCAgACAGTGAGTCGTGATCAGAAGAAGAACCCAGCTATAATCCACACctctacctcctcctcctcagcccaGACACCGACACACAGTCATTGCTTGGTTCTGGATCTCAGCTCGGTCACCTTCATGGACTCTGTGGCCATGCCAGCACTTCACAAGGTTGTAGAAGACTTGGAAGTCCAGGGTGTCAGTGTGTTTCTGGCAGCTTGCCCAGAGAGAGTTTTATCTCAGCTCCAGACTCAGGATTGTACAGCAGACAGCCTGCCCAGCTCCTGTCTCTTCCCATCGGTCCACCATGCTGTACAGCGCTGCCTCAGCACCTTGCCCAGGCCTCTGCAGgAAATCAATCCAGATGCAAGTGAATGTTGAACCTACATGACTGCTGCTTTTGAATGTAAATTACAGGACATCAAGACAAATCCTGGGGGGGGGATAGATTGCTGACAGAACAATCACagcttcattttattttaaaagaaagtCATTTACACTTTTCACAATATGTCTATGTGTACACTTCTCACACATTCCCAGACAATAAATGTAATTGTTCCCCAATTATTTTTGCACTATTATTGAGCTCTCTGTCATGAGCATTTTAGATTTGATTAAGGCCACTGAAGCTGACATAATGAGATGACCTGGAGAATGAAGGGAGAAACATAAACAGCCGTGGCTCCGTAAGCACTGAAAGCGCAGGATAATGCATGACAAATATTTCCAAATTAATTCATCAGTCACTAGTATGCTACTGTTAAATCTGTGTTTTCAAACCACTTAGTCCAGATGTAATAACTTGGAGTCTGAAACACTTCATTTGTTGCTCAGCCTTCAGAATGAGAGCTTCCTACAGTTGCacaataacaaaacacacaaaaatctgTGTGTATACACTCCTATAGCTACAAACCGGAGATGGGaatttactttgtttttataacTGCGTCATAGTATCCATCTACCCTGTTCTGTGATGAactgtgtggtttggattaaggGCAATGACAGTGTTGGTTTACTGTTGGTGACAAAGGCAGACAGTGAGAATGACAGAAAATATGTGGCTGCCCCTCcttctgtatttctttttttcaattagATTATCTTTATTTCGATCTCTAAAACCACGACCGCTAGTGAATCAGTCCTTGTAAGCTGTAAGCCAAGCTTTGTTCAAACTTACAGAGACATTCTAAAGGAAATCTCAAAGTTTTCAAAAGTCCCAAATCTGTCAGTCCATCTGTTTGGGGAAATGTGTCTAAATGAATTAGCAGACAGACTATTCCCATCTGATGAAATGATGCGGATAGGAGTCTGTGTTTGGAATATTTCACACAAAAGTGCAACATAGAGCAGCAAATAAGATACACAATGACCTAATGCAATCTATATATATGATAATGTCAGTGGGGATAATATGACTTTACTAATAACAAAACTACTAAACCAGAAAAATAAGGGGAAAACTGTATGTTAAAAGgttcatgtatgtatgtatgacgAAGGAAGAAGAACAAACTAAATAATCCTATGTTAGGATGGACATTGTAGTTTCCTGCACATTGTAAATACTAATCAGGTTTGTTATGAGTTTCCTCAACAATAGATAAAACTACCCTCTCAACTTGTCTCAATTGTAAGGACTGAAACAGGGAAGtgaatttgtttaaataaatgtcttt

Function

NR:

description
PREDICTED: solute carrier family 26 member 6-like

GO: NA

KEGG:

id description
K18059 SULTR4; sulfate transporter 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801907.1 True 3541 mRNA 0.45 18 27381245 27396360

Neighbor

gene id symbol gene type direction distance location
LOC120559857 slc26a6,LOC101470130 coding downstream 714 27342161 ~ 27380531 (-)
mgll mgll coding downstream 40273 27255981 ~ 27340972 (-)
prkar2aa LOC103359395,LOC100690733,LOC102203050,LOC108233118 coding downstream 130851 27201971 ~ 27250394 (-)
LOC120559022 NA coding downstream 178825 27193282 ~ 27202420 (-)
LOC120559934 NA coding downstream 182418 27198712 ~ 27198827 (-)
wdr6 NA coding upstream 9056 27405416 ~ 27411803 (-)
celsr3 celsr3 coding upstream 21103 27417463 ~ 27534874 (-)
dalrd3 dalrd3,LOC102786329 coding upstream 179814 27576174 ~ 27586501 (-)
impdh2 impdh2,LOC102785462 coding upstream 207878 27604238 ~ 27622170 (-)
arih2 arih2,LOC102785176 coding upstream 231820 27628180 ~ 27643995 (-)
LOC120558937 NA non-coding downstream 75679 27302392 ~ 27305566 (-)
G53540 NA non-coding downstream 126087 27253608 ~ 27255158 (-)
LOC120558995 NA non-coding downstream 165999 27213532 ~ 27215246 (-)
LOC120559521 NA non-coding downstream 562675 26817017 ~ 26818570 (-)
LOC120559916 NA non-coding downstream 580091 26797405 ~ 26801154 (-)
G53608 NA non-coding upstream 163061 27559421 ~ 27595325 (-)
G53619 NA non-coding upstream 247816 27644176 ~ 27644595 (-)
G53621 NA non-coding upstream 267678 27664038 ~ 27665112 (-)
G53627 NA non-coding upstream 303845 27700205 ~ 27700504 (-)
G53665 NA non-coding upstream 322957 27719317 ~ 27724212 (-)
hyal3 LOC103359396 other downstream 181334 27189048 ~ 27199911 (-)
ifrd2 ifrd2,LOC104928016,LOC104966933 other downstream 210013 27157588 ~ 27171232 (-)
G53444 sema3g other downstream 415222 26961347 ~ 26966023 (-)
selenok selenok other downstream 586155 26792452 ~ 26795090 (-)
dcp1a dcp1a other downstream 722924 26646814 ~ 26658321 (-)
xpc xpc other upstream 248423 27644783 ~ 27660646 (-)
LOC120558759 NA other upstream 448904 27845264 ~ 27930515 (-)
LOC120559779 LOC104918355,LOC103374204,LOC103385013 other upstream 756822 28153182 ~ 28186527 (-)
ajap1 ajap1 other upstream 1574926 28971286 ~ 29029321 (-)
LOC120559896 slc25a45 other upstream 1953718 29350078 ~ 29355884 (-)

Expression


Co-expression Network