tmem115 (tmem115)


Basic Information

Item Value
gene id tmem115
gene name tmem115
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 27833718 ~ 27842985 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800944.1
GATGGCAGACAGCGCAGGTCAGTAGCTGAGTGGTGGTACAGGCAGGGAGGAGTGCCTGCTAGATAAAATAATTTTCTCCGGTGACCTGCTCTCAAAAGACGGAAGACCAATACAATAAACGAATGAAGCTAAGGTAGTGTGAAGAACCGCTGAACTATTCGCGAATTGACGCTGGTTCAGAAACGTCTCTAACATTGTTTTGAAGGCCTGTTGCTAGCTACGAGAATCCTCGGGCTAGCCCGGTAGACACCGGGCCGAGAGTGCGCAAGGGACCAGGACAGGGGCTCCGTAGGTTGGTTCGATCGACCAGGTTTTAACTGATGCTGGCTGCCCTGTCTTATAATCAAACCAAGAcgtaacctctcctcctcctccgtggCGGATATAAATCAGCGTAACTCAGTTtgacagctagctaacattagctctcCTGTGTTTACAAGCTAACACAGCCCAAACCCTTTGAAGAAGTTGGACACTTGGGTATATTTGTTTTAGTTAGGATTTGCATATTTGGGTGCTACCACCTGCCTGCTAGCTGGTGGTGATTTGTAACCTTGTTGTAGTTCTGTCCACGCCGACTAAAGGTCGCCAGCCCGGCAGCTAGATCAAAAAGTCTCCTAGCTACGGTTATCGCATTCTTCAAGCTTATCTACTGCTGCCCAAAGTTTGTTACCTTATTTGAATAGAAGGAATAGACTACTGAGTTGATTAACTAAACTATCTTTAACCAGTTGAAAGACAGTAATCCGGATGAAGGCTCACAGAGAAGTGTGGATTTTGATGCTGTCAGGTTTTGGAGGTGTCACCTGTTATTCTTGGCACTATTAAATCTCACACCGGGATCCAACATCTGGTGCACCAGAAGCAACTGATCTGCTGTTTCGCTATCTCGAACTGATTTGCTCAAGAAGGATCCTCTTCAAAACAGACCACAATGAATCGTTACCTGCCAGTGGCACGGCAGCACTTTCTGGCTGCCCTTGCCAGCACCAGTGTGGTAGTGAAAAGTATAAGTGCTGTGGTGGTACTACTCTATCTTTTGTCATGGGCTGTCGACACTCCATACGCACTGGGGGTGACACCAGGCTACCTTTTTCCGCCCAACTTCTGGGTGTGGACACTGGTGACCCATGGGGTGGTAGAGCAGCATGTCTGGGGTGTGGTGGCCAATGTGGGGATAGTTATGGCCTGTGGGCGCCTGCTGGAGCCTCTGTGGGGCGCTCTGGAGCTCCTGATCTTTTTCGCAGTGGTTAATATCTCTGCAGGCCTCCTGGCAGGCCTCTCCTACCTCCTCACCTATGTTGCCACCTTCGACCTGGACTACCTGTTTGCTGTTCGTGCCTATGGAGCAGCTGGGTTCCTGGGAGGTGTCCTGGTGGCGCTGAAGCAGACCATGGGGGATACTACAGTGCTCAGGGTGCCACAGGTGAGACTCAAAGCAGCTCCAGCTttggtcctcctcctcctggccTTGCTGCGCCTGGCAGGCCTGCTCGACAGCTCGGCCCCCCTGGCTGCATACAGCTATGGTGCCCTGTCCGGCTGGGTCTACCTGCGCTTCTACCAGAGGCACAGCCGGGGCCGTGGGGACATGTCGGACCACTTTGCCTTCGCTAGTTTCTTTCCTGAGGCGCTGCAGCCGGCCGTGGGGCTGCTGGCGGGGCTGGTCCACTCCGCCCTGGTGAAGGTGAAGGTGTGCAGGAAGATGGTGAAGAGGTACGACGTGGGGGCGCCCTCCTCCATCACTATCAGCCTGCCAGGGACGGACCCACAAGATGCAGAAAGGAGGAGACAACTGGCCCTCAAGGCTCTGAACGAGCGTCTGAAGCGTGTGGAGGACCAGTCCGCCTGGCCCAGCATGGACGACGAAGAAGATGACGACGACGACGAGGTCAGGACCGACACACAGCCGCTCCTCCCGGGTGGGCgtgacccctcctccacgccgAGACCAGCAGCAGGGGGACCGGTCGGCGGCTCgctctcctccacctcctcatcCTCAATGTCGCAGAGCAGCGGAGGGCCGTCCACAGGCGGAGCGCAACACCCAGAGTCCAGCATTATCAGCTTCGAGGATGCACCTTCTAGATCGTAACAAATAGAACCCACGTGTACAGATACGCACGCTCTGTTCGGTGTCACTGGAAGGTATACTAGTGTAGTCAGCGTCCCTGACTAGTATACAAATATGTTCAGTGACAGTGAGTAGGTATACACTCGATATCCCACacgccaacacacacaacatcttTGACCAGTTCATACACACGGACCGTGCGCTCACAAACAGACTGTCAATGTCATGATGAAGcccaaagggggggggggtaactGTAAAGTGCTTTCAGTTCAGACATGTTGTTTGTAAATGCTCAGTGTAGATGGGCAAACTGGACACTTAATTCTTCTTCCTTCCTGCATACGGCCAGAAATTCTGTCTGGTTCCGGACATAATCGGAACTTAGAGTCCTCGGTCCACTGCTTCatgttgtctctttctctttctttctaaataaataacaaaatgggTGTACAATATTCTTTTTTCAAGTCTTTTTCGGAGCAGCCATAGCTCTCTGATGGCCTGCCTTGAGAAAGCTTGCAGTGACAGAGACGCACGCTGACTTCTCGATTCTTGATGAAAGGCCGACTCTATGCGCTGAAAAGACAAATTGGCTGCAAGTGACAGTGGATTATGGTTAACTGGTTCTTGATCAGAAACCAGGTGTGTAACGGAGGAAGTATGACCAGCACGTTCTCGGCAGAGGTGCTGGACCAGAGGAAAGAAGCTGGTGCAGGTCTGTCCTGCTGATAAACTATGATACAAAACTTCAAGATTTGAAGAGGTGAAAATCATTTTTCCGGGCCAGGTTCGTTTGCCGCCTGGTGTCTCTGTGGAACAACAGGCAGAGAAATGGACTGGTGGTGTACCCATTTTTTAATCCCCCGTTTGTCGTTCAAATGAGAACaattgtgtattttatttttcttctagaTCTGTTTGTGACTAAacaaaatccccccaaaaaaaaaaaaaatcttttgtttctgtgcacTAACCAGACACGTTCATGACGTTACACTCTCACACAGATCTGTGGATGATGATTATGATTCTTGTTTTAACGAATTTATTGCATTTTTCAATATCAAGCCTACTCCTGGAGCATCATCCTGTACCGTTTTACACTTTCACCTTCTATGATCTGAAATGATACAAGAATTATACAATAATCTGGGTGCATGTAATACAGAGTGGTCACTGTCTGTCATGGTTGTGTTTTTTCGTTTGGTGCCATTACAAATGCAGACATGGGTAGAGACTGGTTATTCAGACTGTGCAGGTGTTTTTAGAGTTGCCGATTCAGAGTTGGTACCTGTGCTGTGTCAAACTCTGCTCCCGATTTGTCGATCGCAGACTCGTAAATGACTCCACAGGCAGCGGACACCTGCGCTGATCAGTAAGCAGCCTGGCCAGGGTTTTCCCAGTCACATcctttgcacttgtaaaatctTTCAtttctgggggaaaaaaaacaaaaaaaaacacagtgccAAGCAGAGCCAGTGTTGAATCATTTTCTTGGGAGGTTGACGGGCAGCTAAATTGTTtcataaaaaaacacttcataAATGCTATGCAGTCAGTGATTTATACATGTTGTAGACAGTCATCGCTGTAGATGTGGCAGGCTATTATGGTAATGGTCTTGATCAAATCATTTGAATTCCCAATTTCCCTCCTGTCCTTGTTGATTAAAGTCAGTTGCAGCCAATACATTATTTCAGACGTTGCCATCACGGTGATGACAAATtgataaattatttttaaacttgTGATCAAGaggttgaaaatgttttcatattAAATGGGAATTTCCAAATAGAGGTGAACCATGCAGAATTTGCAATCTGGAAACTACACAAAAATGTATGAATGTAAGTAAGTACAGCAATGTGTTGTTACATGTTTAATTCAAATATAAAGTTgaagttttgtttttca

Function

symbol description
tmem115 Predicted to be involved in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus. Orthologous to human TMEM115 (transmembrane protein 115).

NR:

description
transmembrane protein 115-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800944.1 True 4012 mRNA 0.48 3 27833718 27842985

Neighbor

gene id symbol gene type direction distance location
rhoab LOC107099133,LOC104942029,LOC100707445,LOC102225527,LOC103154003,LOC108233110 coding downstream 4168 27814149 ~ 27829550 (-)
sema3h NA coding downstream 29592 27741839 ~ 27804126 (-)
borcs6 si:dkey-72l14.4,LOC107717508,LOC107669648,LOC107556497 coding downstream 100192 27724512 ~ 27733526 (-)
arih2 arih2,LOC102785176 coding downstream 189723 27628180 ~ 27643995 (-)
impdh2 impdh2,LOC102785462 coding downstream 211548 27604238 ~ 27622170 (-)
LOC120559481 dnajc16 coding upstream 470084 28313069 ~ 28319508 (-)
LOC120558755 lrrc47,LOC102780667 coding upstream 557162 28400147 ~ 28401849 (-)
LOC120558756 lrrc47 coding upstream 592527 28435512 ~ 28439028 (-)
LOC120558751 lrrc47 coding upstream 611923 28454908 ~ 28458571 (-)
b3gnt7l LOC103356136,LOC104946517,LOC101486029 coding upstream 657588 28500573 ~ 28502905 (-)
G53671 NA non-coding downstream 79524 27728828 ~ 27754194 (-)
G53665 NA non-coding downstream 109506 27719317 ~ 27724212 (-)
G53627 NA non-coding downstream 133214 27700205 ~ 27700504 (-)
G53621 NA non-coding downstream 168606 27664038 ~ 27665112 (-)
G53619 NA non-coding downstream 189123 27644176 ~ 27644595 (-)
G53736 NA non-coding upstream 355467 28198452 ~ 28198718 (-)
G53768 LOC107716147,LOC107737696,LOC104954971 non-coding upstream 478741 28321726 ~ 28322205 (-)
G53799 NA non-coding upstream 500676 28343661 ~ 28423368 (-)
G53800 NA non-coding upstream 522511 28365496 ~ 28448206 (-)
G53806 NA non-coding upstream 533090 28376075 ~ 28376412 (-)
xpc xpc other downstream 173072 27644783 ~ 27660646 (-)
hyal3 LOC103359396 other downstream 633807 27189048 ~ 27199911 (-)
ifrd2 ifrd2,LOC104928016,LOC104966933 other downstream 662486 27157588 ~ 27171232 (-)
G53444 sema3g other downstream 867695 26961347 ~ 26966023 (-)
selenok selenok other downstream 1038628 26792452 ~ 26795090 (-)
LOC120558759 NA other upstream 2279 27845264 ~ 27930515 (-)
LOC120559779 LOC104918355,LOC103374204,LOC103385013 other upstream 310197 28153182 ~ 28186527 (-)
ajap1 ajap1 other upstream 1128301 28971286 ~ 29029321 (-)
LOC120559896 slc25a45 other upstream 1507093 29350078 ~ 29355884 (-)
clcnk clcnka,LOC104952128,LOC102786725 other upstream 1631518 29474503 ~ 29492975 (-)

Expression


Co-expression Network