asb2a.2


Basic Information

Item Value
gene id asb2a.2
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047613.1
NCBI id CM018559.1
chromosome length 22090854
location 18906552 ~ 18914664 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026948108.2
CACTCCACAGAGCAGTCAGGAGAGACGCCGCTGAAAGAGTAGAACTTCTACACTAAATATCTACGCGACCCTGCTTCACACTGCGTAAGGATCTGGCCTCCCCAGGTGGACGATGGCGACTGCACGGGTGTCGGCCCCAAACCTGACGACTTCCTCTGCAGACACAGAGGACTACAGCGTTTATGCTAACATGTCTGAGGACCAGCTCCTGCAGCTAGCTATTGAGCGAAGTCTAGCTGATGCTAATACTCAGCAAATCTGCTCTCACACACCGAGACTGATGGCTCAGTGTTCACATCTCCCACGGTCTCAGAGGGTCCCTCCTCCTGCAAACCCACCTGCAAACCCACCCGCTAATCCACCTGCAAACCCACCCGCTAACCCATCAGCTAATCCACCGGCTAATCCACCAGCTAATCCACCGGCTAACCCACCACTCAGTGAGAAACAATGCTCAAGAATCAACCGAGATGCTCAAAACCATTTATTCAGGAAGGACAAGCAGGAAGTGATTGCTTGGACAAGATACAATGGATTTCTAAGGGTTACTGTCGAATCGGTCAATGATTTAGACCCTTTTCTCTCAGCAATTTGGAAAGGTGATGCTAAGGCTCTAAGTGCGCTAATTCAAACCAAATCCAGAAAACTTTTGGAAGCTAATCAGGATGGTTGGCTCCCCCTGCACGAGTGTGCTTACTACGGCCATGTTGACTGTCTAAAGATTTTACTAAGTGCCGAGCCAGAGACGATTAACAGTCGCACCCTGAAGAACCAAACTCCGCTTCTTCTGGCCGTGACTCGCCGACATTCAGCTTGTGTCCTTTATCTGTTGGAGAAGGGTGCTGATCCCAACCTGGCAAACAACCAGTGGGAGACTCCACTATACAAAGCTTGTGAAAAGGGAAATGAAGAAGTTGTCAGTTTTCTGATAAGATACGGAGCATCAACAACCAAGTCGTCTGTGCAAGGCATAACACCATTGCATGAAGCAGTGACAAGCAAAAATGTGGAGATGTGCAAGATGCTGCTGCAAGCAAAGGCAAATCTGATGGCTAAAAACATTTATGGCATAGATCCGCTATTTACAGCAGCTCAGTGTGGTGCTGCTGAAGTTCTTAGCTTCCTGCTCATGAAAGGTGCAGAAGTCAACACTCAGGCTAACGATGGAGCCTCGGCCTTGTTTGAAGCCTCTAAAAATGGTCACCGTGAAGTCGTGGAGATTCTCTTGTCCAGAAGGGCTGATGTTAACAAATCTAACAAAGCTGGACTACTTCCTATTCATGTTGCTGCTAAAAACGGACATGCTGAaATTGTTGCAATGCTAATACCAAGAACTAGCAGAGCTAAAATAAGGCGCTGTGGCATCAGTCCTCTTCATATGGCCGCAGAACGCAACAGAGATGGTGTTCTTGAGATGCTGATAGATGCCGGTTTTGATGTCAACTCCATGCTGTCGGAGGATTGGTCCAAAATGTATGAGGATCATCGCAGCACCGTGCTCTACTGCGCCGTGTCCAACAGTAATATCGATGCGGCCACAATGCTTCTGGAGGCTGGGGCCAACCCAAACCTGGACACCTTCAATCCTCTGCTTGTTGCTGTGAGGAAGGGCTACATGGAAATGGTCAAGCTTCTGGTCAACCATGGTGCAAATATTAACTCCATTCTCCCAACTCACCCCACCGACTTCCCGGCCGCTTTGATTTTTTGCATGAATTTCTTGCCCATGTTTAAGTACCTAATGGATAATGGGTGCGATGCCCTATCGTGTTTTACGTGTGACTATGGTAGCAATTCTCACCCACCCATGAAATCCAGCAGAGATGGAAGGGACAGGCTATATTACATCAGCGATGAAAATTCAGAAAGCTGTGTACAGTTCTGTGAGATGATCTCAAGGTCATCAGTCTCCAGTTGGGCTGGACCTGTCATAGACATACTGCTAGACTACGTGGGTCATGTGAAGCTCTGTTCCAGACTTACCGAACACCTGGACAGTTACAGTGAATGGGCTCAAATCAAAGACAAAGCAATGCCTCCTCGCCCCTTGATGCATCTCTGCAGAATAAAGATTCGTCAGCAGCTGGGAATCCAGAGACTAAGACAGATGAACAATCTTCCTCTACCTGGGAGGCTTATCAAGTTCTTACGGCATGAGAAAGAATCGTTTTCTGATATCCTGTGAAAGGTTGGACTTTGAAAAACAGTCTCAgatttcttctatttttctgGATAAGTGATGCCATGACTTtaacaaatataacaaaaagaaatatcCAGGAAGCTCCTCAAAGCTAATAAAGATGTGTAAATTCTCGATTTGTAAGTTTTGCTAAGTTGTGAGATTGATGTTATTactgattttattgttttatgtgtTTAGTCAAACCAGCTGTTTTGTTTTAGGcaactgattttctttttgcattaaatatatttactgctttttatgCTTTATTCAATCAGATtcgattaaaaaaatcatccatGTGAAATTTCACAGCAAATACTAAGTTAGCTTGTTGTAAATTGACTTATTATGGGGCGCCTGATCATTTCTtgagttctgattggctgaaatggTGACCGTATACATTTGAATCTAAAGTTGatgaacagaattttaaaaGTGTTGTGACACCAaaatttggattttttatttttacaatttttattcaaattgtaTTTTCAAAAACATCAAATTTAGTTTTAATACAAATTCAGTTTGTAGAATACAAAGTCAACTTAATCCAACTTCAGCACTTAATACAATTTCAAAGTAAAGGTAGCaatttaagatttatatttatataattttttatttatattatatatattttttgaaccACAGTAATGTAAGAAACGTGACTTTGATAGCGCTGCTGCTGAGTATTTAATTCCAGTACCAGCTAGCCGAAGTTATCTTAATGAACAGGAAGACAATTCCATATAATATGTTACTATATGTGTAGTATAgtttaatgttttacatttaatttgacaattattattattattattattattattattaggaaagGTTTACATCTGGAAGCTGATGACTGCTATATAATCGAGGCGCTGTTATGAAATACATGAGGTTTACTGTGAATCACTGTGCATTATATTCTGTGTAATAGTGTACAGGAtgtgtataatattgtatatgatgtatgataaatatgtttttacaaCACATTTGT
>XM_034313738.1
TGCTGCGTTTTTCAGGATCTGGCCTCCCCAGGTGGACGATGGCGACTGCACGGGTGTCGGCCCCAAACCTGACGACTTCCTCTGCAGACACAGAGGACTACAGCGTTTATGCTAACATGTCTGAGGACCAGCTCCTGCAGCTAGCTATTGAGCGAAGTCTAGCTGATGCTAATACTCAGCAAATCTGCTCTCACACACCGAGACTGATGGCTCAGTGTTCACATCTCCCACGGTCTCAGAGGGTCCCTCCTCCTGCAAACCCACCTGCAAACCCACCCGCTAATCCACCTGCAAACCCACCCGCTAACCCATCAGCTAATCCACCGGCTAATCCACCAGCTAATCCACCGGCTAACCCACCACTCAGTGAGAAACAATGCTCAAGAATCAACCGAGATGCTCAAAACCATTTATTCAGGAAGGACAAGCAGGAAGTGATTGCTTGGACAAGATACAATGGATTTCTAAGGGTTACTGTCGAATCGGTCAATGATTTAGACCCTTTTCTCTCAGCAATTTGGAAAGGTGATGCTAAGGCTCTAAGTGCGCTAATTCAAACCAAATCCAGAAAACTTTTGGAAGCTAATCAGGATGGTTGGCTCCCCCTGCACGAGTGTGCTTACTACGGCCATGTTGACTGTCTAAAGATTTTACTAAGTGCCGAGCCAGAGACGATTAACAGTCGCACCCTGAAGAACCAAACTCCGCTTCTTCTGGCCGTGACTCGCCGACATTCAGCTTGTGTCCTTTATCTGTTGGAGAAGGGTGCTGATCCCAACCTGGCAAACAACCAGTGGGAGACTCCACTATACAAAGCTTGTGAAAAGGGAAATGAAGAAGTTGTCAGTTTTCTGATAAGATACGGAGCATCAACAACCAAGTCGTCTGTGCAAGGCATAACACCATTGCATGAAGCAGTGACAAGCAAAAATGTGGAGATGTGCAAGATGCTGCTGCAAGCAAAGGCAAATCTGATGGCTAAAAACATTTATGGCATAGATCCGCTATTTACAGCAGCTCAGTGTGGTGCTGCTGAAGTTCTTAGCTTCCTGCTCATGAAAGGTGCAGAAGTCAACACTCAGGCTAACGATGGAGCCTCGGCCTTGTTTGAAGCCTCTAAAAATGGTCACCGTGAAGTCGTGGAGATTCTCTTGTCCAGAAGGGCTGATGTTAACAAATCTAACAAAGCTGGACTACTTCCTATTCATGTTGCTGCTAAAAACGGACATGCTGAaATTGTTGCAATGCTAATACCAAGAACTAGCAGAGCTAAAATAAGGCGCTGTGGCATCAGTCCTCTTCATATGGCCGCAGAACGCAACAGAGATGGTGTTCTTGAGATGCTGATAGATGCCGGTTTTGATGTCAACTCCATGCTGTCGGAGGATTGGTCCAAAATGTATGAGGATCATCGCAGCACCGTGCTCTACTGCGCCGTGTCCAACAGTAATATCGATGCGGCCACAATGCTTCTGGAGGCTGGGGCCAACCCAAACCTGGACACCTTCAATCCTCTGCTTGTTGCTGTGAGGAAGGGCTACATGGAAATGGTCAAGCTTCTGGTCAACCATGGTGCAAATATTAACTCCATTCTCCCAACTCACCCCACCGACTTCCCGGCCGCTTTGATTTTTTGCATGAATTTCTTGCCCATGTTTAAGTACCTAATGGATAATGGGTGCGATGCCCTATCGTGTTTTACGTGTGACTATGGTAGCAATTCTCACCCACCCATGAAATCCAGCAGAGATGGAAGGGACAGGCTATATTACATCAGCGATGAAAATTCAGAAAGCTGTGTACAGTTCTGTGAGATGATCTCAAGGTCATCAGTCTCCAGTTGGGCTGGACCTGTCATAGACATACTGCTAGACTACGTGGGTCATGTGAAGCTCTGTTCCAGACTTACCGAACACCTGGACAGTTACAGTGAATGGGCTCAAATCAAAGACAAAGCAATGCCTCCTCGCCCCTTGATGCATCTCTGCAGAATAAAGATTCGTCAGCAGCTGGGAATCCAGAGACTAAGACAGATGAACAATCTTCCTCTACCTGGGAGGCTTATCAAGTTCTTACGGCATGAGAAAGAATCGTTTTCTGATATCCTGTGAAAGGTTGGACTTTGAAAAACAGTCTCAgatttcttctatttttctgGATAAGTGATGCCATGACTTtaacaaatataacaaaaagaaatatcCAGGAAGCTCCTCAAAGCTAATAAAGATGTGTAAATTCTCGATTTGTAAGTTTTGCTAAGTTGTGAGATTGATGTTATTactgattttattgttttatgtgtTTAGTCAAACCAGCTGTTTTGTTTTAGGcaactgattttctttttgcattaaatatatttactgctttttatgCTTTATTCAATCAGATtcgattaaaaaaatcatccatGTGAAATTTCACAGCAAATACTAAGTTAGCTTGTTGTAAATTGACTTATTATGGGGCGCCTGATCATTTCTtgagttctgattggctgaaatggTGACCGTATACATTTGAATCTAAAGTTGatgaacagaattttaaaaGTGTTGTGACACCAaaatttggattttttatttttacaatttttattcaaattgtaTTTTCAAAAACATCAAATTTAGTTTTAATACAAATTCAGTTTGTAGAATACAAAGTCAACTTAATCCAACTTCAGCACTTAATACAATTTCAAAGTAAAGGTAGCaatttaagatttatatttatataattttttatttatattatatatattttttgaaccACAGTAATGTAAGAAACGTGACTTTGATAGCGCTGCTGCTGAGTATTTAATTCCAGTACCAGCTAGCCGAAGTTATCTTAATGAACAGGAAGACAATTCCATATAATATGTTACTATATGTGTAGTATAgtttaatgttttacatttaatttgacaattattattattattattattattattattaggaaagGTTTACATCTGGAAGCTGATGACTGCTATATAATCGAGGCGCTGTTATGAAATACATGAGGTTTACTGTGAATCACTGTGCATTATATTCTGTGTAATAGTGTACAGGAtgtgtataatattgtatatgatgtatgataaatatgtttttacaaCACATTTGT

Function

NR:

description
ankyrin repeat and SOCS box protein 2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026948108.2 True 3203 mRNA 0.41 10 18906552 18914664
XM_034313738.1 False 3129 mRNA 0.41 9 18908129 18914664

Neighbor

gene id symbol gene type direction distance location
LOC113547694 LOC108257617 coding upstream 2227 18895076 ~ 18904325 (+)
serpina10a LOC108258118 coding upstream 48680 18851631 ~ 18857872 (+)
prph2lb LOC108258119,LOC108424527,LOC107569893,LOC107665408,LOC107711660,LOC107721267,LOC107602225 coding upstream 56660 18845660 ~ 18849892 (+)
zbtb25 zbtb25 coding upstream 280700 18618477 ~ 18625852 (+)
vps18 vps18,LOC107739368,LOC107602125,LOC107668247,LOC107659178 coding upstream 722255 18170603 ~ 18184297 (+)
asb2a.1 asb2 coding downstream 2798 18917462 ~ 18937286 (+)
prima1 LOC108257636 coding downstream 38918 18953582 ~ 18988656 (+)
btbd7 LOC108257833 coding downstream 123549 19038213 ~ 19064443 (+)
si:dkeyp-55f12.3 NA coding downstream 171044 19085708 ~ 19087204 (+)
LOC113547660 NA coding downstream 326883 19241547 ~ 19249331 (+)
G298128 NA non-coding upstream 42966 18863000 ~ 18863586 (+)
G298036 NA non-coding upstream 177150 18728974 ~ 18729402 (+)
G297973 NA non-coding upstream 330196 18575992 ~ 18576356 (+)
G297650 NA non-coding upstream 652924 18253426 ~ 18253628 (+)
G297632 chac1 non-coding upstream 654128 18250282 ~ 18252424 (+)
G298150 NA non-coding downstream 87676 19002340 ~ 19066945 (+)
G298151 NA non-coding downstream 133366 19048030 ~ 19068115 (+)
G298163 NA non-coding downstream 144632 19059296 ~ 19059584 (+)
G298174 NA non-coding downstream 172594 19087258 ~ 19088413 (+)
G298187 NA non-coding downstream 195923 19110587 ~ 19110814 (+)
syndig1l syndig1l,LOC107562693,LOC107659181,LOC107602907,LOC107711667 other upstream 378353 18495675 ~ 18528199 (+)
ino80 ino80,LOC107668207,LOC107739367,LOC107721325 other upstream 660495 18186027 ~ 18246057 (+)
sipa1l1 sipa1l1,LOC107721317,LOC107756605,LOC107659170 other upstream 964374 17854724 ~ 17942178 (+)
max max,LOC107721316 other upstream 1099375 17789100 ~ 17807177 (+)
syne1a LOC108257639 other upstream 1427281 17252099 ~ 17479271 (+)
itpk1a itpk1,LOC108257830 other downstream 181288 19095952 ~ 19137613 (+)
G298379 NA other downstream 375321 19289985 ~ 19290539 (+)
G298409 NA other downstream 486885 19401549 ~ 19546734 (+)
LOC117599696 NA other downstream 1167842 20082506 ~ 20084497 (+)
flrt2 flrt2,LOC108258011 other downstream 1911025 20825689 ~ 20838690 (+)

Expression


Co-expression Network