btbd7 (LOC108257833)


Basic Information

Item Value
gene id btbd7
gene name LOC108257833
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047613.1
NCBI id CM018559.1
chromosome length 22090854
location 19038213 ~ 19064443 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034313756.1
acacacacacacacacacagaggaatggCTGACGGCGCTCCAGTGTCTCCTCGTCTCCTCAGGCCTGAGCGAGTGAAGCTGTGAACCGGGCGGTGTGTTATCACCGGAGCGGAATGATTTAGCAGGGTGGCACCAGCCGTGCACGtcaaaaagaggaggaggaagaggaagaagatggGGGTTAATGCCTCCAGCTATCCTCACTCGTGTTCCCCTCGATTCGGGGGACATTCACCTACTCAGCAAACCTTCATAGGCACATCCTATGCACCCCAGGGTTATGGAGTTGAGTCAAAGCTCTACAGCTTGGAGCATTGCCCCGAGAAACCTcaggacaagaagaagaagagctcgAGCCTGGCCACGCTGAAGAGGCGGTTCATTAAGCGGCGCAAGGCGAGCCGCTCGGCAGATCACGCGCGCCACATGAGGGATCTGCTCTCGGGCTGGGACGTACGCGACGTCGCCGCCCTGGTGGAGGAGTACGAGGGCACGGCCGCGCTCAAGGAGCTCAGCATGCAGGCGTGTCTGGCCCGCCCCGAGGCTCGCACCCTGTCCCAGGACCTGGCCTCTCTTTACCAGCACAAATACTGCACAGACGTGGAGCTCATCTTCCAGGACACGCGCTTCGCCGCTCACCGAGCCGTCCTGGCCGCACGCTGCCCCTTCTTCAGGACGCTGCTGTCGTCGTCGCCCGGGTACAGCACCCAGCTGCTCCTGGACGTGGGCACGGCGGggatggacgcctccatgttctCAGCGCTGCTGCGTTACCTGTACACCGGCGAGCTGGGCGCCGAAGACACCCGCCTGCACAACGTGGACGTCCTGCTGCGGCTCAGCGAGGAGTTCGGGACGCCCAGCTCCCTGGAGACGGACATGCGCGAGCTCCGCCAGAGAATGTGCTACTACGACTCCGTGCTCTGCTTCTCCTCCGACTCCGAGCCGGACGAACCTTTCGGAGCAGACATGAgcggagaggaggaggagctgaagGCTCATAAAGCCGTCCTGGCAGCGCGCTCGCCGTTCTTCCGGAACCTGCTGCAGCGCCGCGTGCGCGCGGCCGAAGAGGACTCGACGCCCGCGCGCATCGTACTGAACGAGTCCATCATCCCGCGGAAGTACGCCGGCGTGGTGCTGCACTGCATGTACACGGACGCGGTGGAGCTGGAGCGCGTGGTGCGGAGCAGCCCCTCGGCCGGCAGTCTGGGTGAAGCTCAGGCTTTAGCTGCCGGAAAGGGAAGCATGAGCAGAGCCGAGGAAGCCATGGAGCTGTACCACATCGCCCTCTTCCTCGAGTTCAGCATGCTCGCGCAGGgctgtGAGGACATCGTGGTGGAGAGCATCTCTCTGGACTCAGTGGTGCCCATCCTGAAGTGGAGCTCACAGCCGTACGGCTCGAAGTGGGTCCATCGCCAGGCTCTGCACTTCCTGTGCGAGGAGTTCAGTCACGTGATGACGTCAGACGTCCTGTACGAACTGAACAAGGAGTACCTGCTGGGGGCCATCCAGTCTGATTACCTGCAGGCCAGCGAGCAGGACGTCCTGAAGTACGTGGTGAAGTGGGGAGAACACCAGCTCATCAGGAGGATGGCCGATCGAGagccCAACCTGCTGAGCGGCACGGCCCACAGTGTGAATAAGCGCGGAGTGAAGAGGCGGGATCTGGACGTGGAGGAGCTGAAGGAGATTCTGTCCCCTCTGCTGCCTTGCGTGCGCACCGAACACATTCTGCCCACCAACAGCGAGGTCCTCTCCGACACGCTGAAGCGTGGTCTGATCAGCACGCCTCCGTCAGACATGATCCCTACGGTGGAGGGAGGAAAAGCGAACGCCTGGCTGAGGCAGAAGAGCGCCGGCATCTACGTACGCCCTCGCCTCTTCACTCCATACGTGGAGGAGGCCAAGGCCGTCCTGGACGAGATGATGGTGGAGCAGACGGACCTCGTGAGGCTGCGCATGGTGCGCATGTCCAACGTTCCCGACACTCTCTACATGGTCAATAACGCCGTACCCCAGTGCTGTCACATGATCAACCACCAGCAAATGGCTGGCAGCCAAACAGCCCCGCCCTCAGTGGTGGCCAATGAGATACCAGTTCCCAGGCTGGCAGTGGTGAAGGAGATGATTCGGCGGCTGCACGAGCTGCGGCACACGGAGCAGGTCCAGCGAGCGTACGCCCTGAACTGTGGCGAAGGAGCGACGGTCAGTTACGAGCTGCAGATCCGAGTGCTCAGGGAGTTCGGCCTGCCTGATGGAGCTGCAGAACTGCTTCAGaaCCCGCACAAGTTTTTCCCTGACGAGCGTTTCGGAGACGAGAGCCCGGTGCTGGCCCTGCGTCCGTCCGCTCGCTGTCGGGTTAACAACCCGGCTGTGGAGAGCATGTTCACAGACCTGCAGGCCGTGATGGGCCTCCATCCGCCCCTCCCCCCTCCGCCGCCGCCGTACCACCCTCCCACCACGCAGCAGATCCGGAGCGGCTGGAGGCCCCGCGTGCCCACGCAGCAGCCCTCACGCTCCTTCTCCTACCCCTGCAATCACTCGCTGCTACACTCGCAGGCCTCCTCCAAAATGGGCAGCCCCATTTACCCAGCCACAGGGGTCAAGGCCGTGCCTCCGGACTGTACCAACCCCCAGGGGAGGAGCCTTAACCCGAACAAGAAAGGGAACATGGAGCCGGTCATCAACGAGTTCATGCCGGACATCGCCATGGGCGTATCGGCCATGAGCCTGAAGGACCGCCGCCTTCCTGAGGTCACCATGGAGGTGGAAGGTCACGACCCCCGTCCTTTGGTCTCCACGGTGCCGCCCATCTCTCAGTGCTTCTCCGGCCGCCACCCGCACTCCTCGTCACGCAAGCGGCACGCGGCCGAGCCCAAACCCGACGCGccgcagcacacacacttccccgACCTGTACGAACTCTACACACACGGCCGCAACGACGCCGCGCACCGGCTCCACCTCGCCCTGGGAGCTCAGGCCAACCAGAGAGCGCCGCCTAAAGGAGAGACGGACCTGACGTGCGGCCTGAGCCCCGACACGGAACCCTACGATGAGTGGAACCCGAGCCGAAGGGTCGCTGGCCCCGGCGCCGCTGCAGCGGGGATcggggaggagggaggagggatcGGGGGTCGAGAGCGCAGGTCACCTAACAAACACGAATACCTGTACAGGAAGTCCGCACTATGACCCTGGAGAGAGACTCAAGAAGGCTTTAAGGCAcaaaatcacagatttaaagCCTTTTAATGCTCGGGTTTGATTAAGGGGGGAAAATACGATGAATATATCTTgtccacattttatttttaaatatttaaacgcCCTCATTCAGGGCACTGAAGCTAAAACTCACTTGGGTTACTGACAATCAGCATAGAAATGAAATCTCAATGAGTTCCCAAACTGCGTCACGATGCAGAACCGTCACTGTGCGTTCCcattacattcatttttctCTGCCTTTGGGTTCAATACActagctgagagagagagagagagagagagagagagagagagagacagaaatatatatttatacagatgTATTATGCATTTATCTTTGCTTAGGAATaaaccataaaataaaaaaaaaaaaacgtccagGCAATAAGTCACCTCATCCAAACCTCGCAAACATTAATGACGTGACATGTTTAAATACCAGCGCTGCGTTCATGACTAAGTGGGAACTAGGAAACAGAATTCCTTCTGAAGTCCTTCGCTGCTCACTTTCACTTCCTGATCATAAactgaaacctttttttttttaaaagctttacgGATCGTTATTTTGACAGATTTGCTCACCTTCACGCGTTTTGCGTAGGAACTCTGCGTTGTAACCTCGCTGCTACGAGTTATCACAtatcaaaaatatgcaaaaagacTCCAGATGAGTCGACTGACATGTAAATCTGGAACGACTGACAGTTGCGTAGGTGTTTTGTGCTCGCTGATGTTAACTGACGCTCtctggaagctccgccccctttccCTCATCTCACAATGGTAGCTTAATCCTCGCTTGTAAGATGGCGCGCCGTCCGGGAAAATTTAGTTTCGAGTTCATTAACGTGAAACAAAATCGATCGTTGTATGTTTGACCGTAGTTTCTCCTCCATGATGCGATCGGTTGGCACATATTTCATTTTacgtctttttttaaaaaaatttttaagcGTCTACTGTTTTTAGGATTACGCAAAGTAgcgctgggcaatatgacaaaaatagaTCACGATATCTCAAGACATTTCTACGCTACACGTTATTTAGGCTTtgtaacaaactgccagcaaaaatTGCAggagtttaaaataaatctttaaaaatgagtGTGAGGATACGTTTATTTAATacgtacaaaaataaattacatttttaaacaattttaaaaatttagacattttatcAAATCTGCTTCCggagtttgtaattgttatttaaaaacaaaacatatgaaAAGATATCACAGTTTATCCCAGATAAatgtattgtgatattgtgtaatttatcacgatattgatgttatatcgtcatatcgcccGGCTCTAACGTCAAacagatttaataaattaaaattaaaataattaaaaattactaGGTAGAAatatgtcagattttttttttccccctcagttTGAGAATCGCTGCTCAAGAATCAGTTAACTGGcgttaattaataattaatttgtgtttatttatttcatgaaatacCAAGGTTTAAAATAAAGCACTAACCAAAACAAgtcaagcttttattttttatttttttttgaaagatatttaaccttttttttatccGAAAAACGAGTGTGTGCTTAATCAGCTTAAACAATAAAGGGTGTGTCgagtttaaaaagtaaaagtccCAGTTGTCATGAACGCAGCATCGATCTCTAAATACAGTGTAAAGCTGCTCACACCTCGCCGTGTTCCTCTAAGCTCCTCTGTAGTTCTGCGGGTTTACAGATGTAACGATGCTGCCTGCTTTCTTAACGAACAACAATTCACTCTTTCATCTTCTGCCTTTTCCGCTAGATacgtataaatatatatctttaaCCATGCACTCTCATCCTGCTGCGCTTTATTaacatcctcctcttcctcttcctcctcctcctcctcctcctcagcccTGGACGTGAACTCGTATCCGTGTCCCAGTCGGCGTTTAAGAATCAGCATGACGGagtttattgttttgttgttgttgtttttcctttagTACCGAGTATAGAAGCGTTTACCTCACACTCGAAAACACcttcattctgttcattctgCATTAAAGCGAGAGCTCACATGCTGCATCGATTAACGTCGATTAACATCGCTAGCAGCCTGAACGTCAGCTCAGATTCCTCTCTTCCTATCctttatgagaaaaaaaaaggataatctCTCTGATGCAGTCGCTGATGCGTGATATATGCAGCTTTATACTGTTTATGCCATGTTTCATGGTACTGTAACGTTACGGTCTTCGACGGCGGTCACCTGTGCAAGCTGGAATCAGGGATCTGTCTCAGCTCACTCGTCAAAGAAAGCGCTCCTCTCGTTTAGCCCAGTCCAGTGCTGAATGCAGTACTTTCTGCCTTtccgtgaaaaaaaaaaaaaaa

Function

NR:

description
BTB/POZ domain-containing protein 7-like isoform X2

GO: NA

KEGG:

id description
K10479 BTBD7; BTB/POZ domain-containing protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034313756.1 True 5636 mRNA 0.52 11 19038213 19064443

Neighbor

gene id symbol gene type direction distance location
prima1 LOC108257636 coding upstream 49557 18953582 ~ 18988656 (+)
asb2a.1 asb2 coding upstream 100927 18917462 ~ 18937286 (+)
asb2a.2 NA coding upstream 123549 18906552 ~ 18914664 (+)
LOC113547694 LOC108257617 coding upstream 133888 18895076 ~ 18904325 (+)
serpina10a LOC108258118 coding upstream 180341 18851631 ~ 18857872 (+)
si:dkeyp-55f12.3 NA coding downstream 21265 19085708 ~ 19087204 (+)
LOC113547660 NA coding downstream 177104 19241547 ~ 19249331 (+)
LOC113547657 LOC108257673 coding downstream 189593 19254036 ~ 19264088 (+)
LOC117599671 NA coding downstream 264782 19329225 ~ 19329925 (+)
LOC113524710 NA coding downstream 301563 19366006 ~ 19366943 (+)
G298128 NA non-coding upstream 174627 18863000 ~ 18863586 (+)
G298036 NA non-coding upstream 308811 18728974 ~ 18729402 (+)
G297973 NA non-coding upstream 461857 18575992 ~ 18576356 (+)
G297650 NA non-coding upstream 784585 18253426 ~ 18253628 (+)
G297632 chac1 non-coding upstream 785789 18250282 ~ 18252424 (+)
G298174 NA non-coding downstream 22815 19087258 ~ 19088413 (+)
G298187 NA non-coding downstream 46144 19110587 ~ 19110814 (+)
G298195 NA non-coding downstream 76296 19140739 ~ 19142981 (+)
G298215 NA non-coding downstream 124458 19188901 ~ 19191553 (+)
G298230 NA non-coding downstream 152116 19216559 ~ 19217201 (+)
syndig1l syndig1l,LOC107562693,LOC107659181,LOC107602907,LOC107711667 other upstream 510014 18495675 ~ 18528199 (+)
ino80 ino80,LOC107668207,LOC107739367,LOC107721325 other upstream 792156 18186027 ~ 18246057 (+)
sipa1l1 sipa1l1,LOC107721317,LOC107756605,LOC107659170 other upstream 1096035 17854724 ~ 17942178 (+)
max max,LOC107721316 other upstream 1231036 17789100 ~ 17807177 (+)
syne1a LOC108257639 other upstream 1558942 17252099 ~ 17479271 (+)
itpk1a itpk1,LOC108257830 other downstream 31509 19095952 ~ 19137613 (+)
G298379 NA other downstream 225542 19289985 ~ 19290539 (+)
G298409 NA other downstream 337106 19401549 ~ 19546734 (+)
LOC117599696 NA other downstream 1018063 20082506 ~ 20084497 (+)
flrt2 flrt2,LOC108258011 other downstream 1761246 20825689 ~ 20838690 (+)

Expression


Co-expression Network