G134211


Basic Information

Item Value
gene id G134211
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047602.1
NCBI id CM018548.1
chromosome length 30442583
location 16849227 ~ 16849490 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU158575
CCcgaggctcactgatgcgcgtggggactgaaggctagcccgtgtggtccaatcccacagaagagctactgtagcacaaattgctgaaaagttaatgttggctatgatagaaaggtgtcagagcacacagtgtgtcacagcttgctgcatatggggctatgtagccacagaccggtcagagtacccatgctgacccgtgtccactgccgaaagtgcATACATTGGGCACGTGAACATTAGAACTGGaacatggagcaatggaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158575 True 264 lncRNA 0.52 1 16849227 16849490

Neighbor

gene id symbol gene type direction distance location
gcn1 gcn1,LOC107552181 coding downstream 38235 16752821 ~ 16810992 (-)
rab35b rab35,rab35b,LOC108430363,LOC107699662,LOC107671023 coding downstream 101003 16739328 ~ 16748224 (-)
LOC113524481 cit,LOC108265536 coding downstream 165345 16627414 ~ 16683882 (-)
pptc7a pptc7,pptc7a,LOC107552188,LOC107553043,LOC107671007,LOC107699657,LOC103044306,LOC108430358 coding downstream 402469 16439215 ~ 16446758 (-)
srrd srrd coding downstream 425641 16419042 ~ 16423586 (-)
ctu1 ctu1 coding upstream 635 16850125 ~ 16855666 (-)
upb1 upb1,LOC104952039 coding upstream 19690 16869180 ~ 16932248 (-)
LOC117597825 tkt coding upstream 172703 17022193 ~ 17036618 (-)
LOC117597826 tkt coding upstream 240066 17089556 ~ 17149771 (-)
serpind1 serpind1 coding upstream 391699 17241189 ~ 17244145 (-)
G134122 NA non-coding downstream 152554 16695936 ~ 16696673 (-)
G133916 NA non-coding downstream 398741 16449726 ~ 16450486 (-)
G133915 NA non-coding downstream 399957 16448872 ~ 16449270 (-)
G133914 NA non-coding downstream 400429 16448493 ~ 16448798 (-)
G133810 NA non-coding downstream 577020 16271634 ~ 16272207 (-)
G134221 NA non-coding upstream 91297 16940787 ~ 16940991 (-)
G134237 NA non-coding upstream 141613 16991103 ~ 16991311 (-)
G134243 NA non-coding upstream 166767 17016257 ~ 17016534 (-)
G134257 NA non-coding upstream 169230 17018720 ~ 17019404 (-)
G134260 NA non-coding upstream 171720 17021210 ~ 17089493 (-)
rnf165b rnf165,rnf165b,LOC108265796,LOC108430336,LOC107726876,LOC107569673 other downstream 749980 16085069 ~ 16099247 (-)
ccl27a NA other downstream 896548 15950262 ~ 15952679 (-)
LOC113532496 NA other downstream 1669031 15177787 ~ 15180196 (-)
sema6a sema6a,LOC107661172,LOC107663594,LOC106585847 other downstream 1786005 15001347 ~ 15063222 (-)
ccser1 ccser1 other downstream 2029499 14742482 ~ 14819728 (-)
ikbkb ikbkb other upstream 1199258 18048748 ~ 18084489 (-)
dynll1 dynll1,LOC103397138,LOC107559583 other upstream 1404095 18253585 ~ 18262218 (-)
ndufa4l2a LOC108434410,LOC108265249,LOC107678808,LOC107571901,LOC103362772 other upstream 2846908 19696398 ~ 19698530 (-)
LOC113533329 LOC108265714 other upstream 3124074 19973564 ~ 20005390 (-)
G135737 NA other upstream 3190807 20040297 ~ 20040688 (-)

Expression


Co-expression Network