AMCG00002484


Basic Information

Item Value
gene id AMCG00002484
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 16754096 ~ 16769522 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002484
GAAGATATAGGTTCTGTTTTTGCGgaaactatatatgtatttttaaagacatattttgtttaatactgGTCGCCGTGAAGTCAGTTGGTCATGGGAACTGGCAATAAAGgggATTCTGGGGACATTTCCCTGTCCAGCCAAGAAGGGGATGCTATCAGGGTGTTTGTGAGAGTCCGTCCGCTCACGCAGGGTGGTGGGCTGTCCACAGACGGGGATCCCAACATGTGTCTGACCGTCACCTCGCCCAACACCATCCGATTGCATTCCAAACCTGAGCCCAGGACCTTCACCTACGATCATTCTGACAAGAAGAGTTTCCTTTGCAAGTGCTCCTTTATTGAAATCTACAACGAGCAGATATTTGACCTTTTGGACAGTGCGTCGGCTAGCCTGTTTCTCCGGGAGAACATAAAGAAGGGAGTGTTTGTAGATGGTGCTGTGGAGAAGATTGTGCTGTCGATGGGTTGGAGGAATCGGCGGGTGGCCTCTACATCCATGAACAGGGAGTCCTCACGGTCGCACGCGGTCTTCACCGTCACTCTGGAGTCCAAGGAGACGGTCAACGAGATCGTGAACATCAGGAGCAGCATGCTCAACCTGGTAGACTTGGCTGGCTCAGAGAGGCAGAAGGACACCCACGCGGAGGGGACCAGACTGAAGGAGGCCGGCAGCATCAACCGCTCCCTCAGCTGCCTGGGTCAGGTGATGATGGCCCTGGTGGACATGTCCAATGGGAAGAGCCGACACATCTGCTACAGAGACTCCAAACTCACCTTTCTGCTTCGGGACTCTCTGGGAGGAAATGCCAAAACCTTCATTATCGCCAATGTCCACCCGGGCTCTAAATGCTTCGGGGAGACTCTGTCCACTCTGCATTTTGCTCAGAGAGCAAAGCTGATTAAGAATAAGGCTGTGATCAATGAGGACACGCAGGGCAATGTGATGCAGCTGCAGGCCGAGGTGAAGAAGCTGAAGGAGCAGCTGGCTCAGGCATTGGCCGCCCAGGTTCATGGGGAGGTGCACGGGGACTCTGCACCCGGAGGGCCCAGGGGCCCCTCAGATCCTGTTGAAAATGGTGTTTCACACGGTGAATACAAGAGCCATTTTTTAGAAGCCATGGTGTTCTGGgagaaaagtgaaagtgaaaaaaagACGCTGCTCCAGAAAGTGGCTCAGCTCGAGGACGCGTGGGCCAAGAAAGAGAAGTTCATCCAGTCCAATCGGATGATCCTGAAGTTCCGCGAGGATCACATCTCCCGGCTGGAGAAGACCCTGAGAGAGTCGCATGGGGGGCTGTCGGACCAGGAGAGCGATGCTGTGGTGGCTCAGCTGAAGCAGGAGATCCAGGTGTTAAGGGAACAGGTGGACCAGCACCCGCGTGTGGCGAAGTACGCAATGGAAAACCACAGCCTGCGTCAGGAGAACCAGCAGCTGCGGGCCCTGGAATCGGTGAAGAGAGCCAGAGAGCTGAACGCAGAGGTGGCCGCACAGCTGGAGAAGGCATTCCTGGAGACCACGGCCTCTGAGAAGCCGACTGCAAGTCAGCTAGTTTACTCAACACCTGTGACAGCTGAGAATGTGTCATCAGTGTCGATGGAGAGGCTAAAGGCACAGCTTATGCAGAAACAGACTGAGCTAACCACCACAGTTCAGGCTTATGAAGAATTCAAAGAACTGACTAaACAGAAAATCATGGAGATGGAATCGGAAAAGCGGTACCTTGAAAAAGCCAATCAGCACCTAGAGAATATTTTGGAGGCAACAAAAGCCCACAAACGAGAGGAAGTCTCCCAGCTGAACAAGATGCACGTTGAGACAATCAAGAACCTGACCACTCCCACCAAGGCCTACAACCTGCGCTCTCGCTTGGTGCCACACTTCAGCCCTGACCGCACTCTGGACGGGATCGGGGAGAACCCAGACGAGGAGCAGGTGGACGACATCCTGAACGAGCCCGTGCCTCCGGAGATGACCGAGCTGGCCTGTGAGGCCTTGGCCGAGGAGCTGCACATGGTGCAGGACCAAGCCAGTGCCCTCCAGATCAAGCTGGACGAAGAAGAGGCAAAGACCCGGAAGCTGCAGCAGCAGATCATGCTGAGGAGCGAAGTGCATGACCTAAGGCTGGTGCTGCAGTCGGCCGACAAGGAGCTGGCGGTGCTGAAGGCCGAGTACAGCTCGTACAAGGAAAAACAGGAACTGGAGTTTGGCCAGCTCTCCAGCAGCCTCATCGGTGTGCAGTTGGAGCTGGACAACGAGGCTCACGACAACCTGCAGGAAGTGGTGAAGTTTGAGTCGGAGGAGAACGAGCGACACCTGGCTGAGAGCAAGAGGGAGATCACCGCCCTTCAGGCTGAGCTGAGTaaattgATGGACTCCCTGAAAGTAGAAAAGGAATACAACAGCAATTTAGCATCCCAGCTGGAAGAAGACAAAGAGACCACTTCCAAggAGCTGTTGAAAGCCCTGGATGAGAATATCCACTTGAAGAAGCAGGTTTCTGATTTGAGTTTGCAGTGTGAGCAACAGATGATAAACCTGCACAATGTGGAGAAAAGTCTGGCTGCTGCACAAGCTGCAATTGCTGACCTGGAAAGCAAGAATGCCTCTGACAAAGAGTTTGTGGTGGATATTATGAACCAGATCCAGGAGTTAAGAAGCGTGCTGAGTGAGAAAAACGAGATTCTGTCTGCGCAGACCAGTGAGCTGGAGGACATTAAGGCCAAGTACTCCGCAACTTTGCTAGCCAAGGAGGAGAGCAAGATGATCATCCAGAGGTATGAGAAGGAGACGGTTGAACTCAGGGAGTCGATGGAGAGGAAAGTGGCCTCCGACCTCATTGAGCAAGAGCTGTTGCAAGAGGACCTGTCGCATGCAGCGGAGGAGGTGGAGAGGCTGACGAAAGTGTTCAATGAACAGGCGGCTCTCCTCCAGGCTGCACAGGCAGAGGCCACGGAGAAACAAGCCACCATCCGAGAGCTGCAGGATCAGCTGAAACGGACAGAGGAGCAACTGGCATTTaagaatgaaaatgaactgaATCCCAACGAGCTGGAGCAGGTGACCCCCATCACCCCACCATGTCACTCACAGACCCCCAAGACACCCTGTAGTTTCAATACGGACTTGAGGAAGGTGCTGGATACTCAGGAGAGAGAGCTGGTGAACCGGCGCTCATCCATGGTCACTCTAGAGGTGTTGGTAAAAGAGATGAATGCTGAGAGAATGGCTAAGAATGAGGAAATTCTGCGTCTCAAGGGACAGTTGTGTGAAAAGGAAAACTTGCGTCTGGAAATGCAGACTCTTGTGGACAAGTGCTACACCCTGCAGAAACAACAGGGCCACCATACTAACGGTGAAGACAAGCTTGATCGTGAAGCTCTCATGAGAGAACTGAAGGAGGAGAGAAAAGCAAGGGTTACCTCAATGAAGAAGCTTTCTGAACTGGAAGAGCAGTTGCGCAATACTTCGACCACCCTGTCTAAAGCGGAGATCTGCATTCAGGAGATGACAAACGAACTGAGGAATCGGTCGATTGAACTGAAAGAACTGAGGGAGAAAGATTTGGAGCAGGAAAAACATGCCAAGGAAGTGGATGTTCTGAGGAAACAAGTGGAATTCCTGGCTGAAGAGAATGGAAAACTAGTGGGACATCAAAACCTCAACCAAAAAATCCAGTACCTGGTGaagcttaaaaaagaaaacaccaaacTGATTGAGgacaATGAAAAACTCCGCCTGGAAGTCTACAACttgaaagaaaatggcaaaaaaaaatctgacagcCTCTCCAGTGAGCCCATGGGTTTGAATTAATCTCTCAGACAGCAGGTGCATGAGTCACACATCTCGTATGAAACACGGTTACCCACATGCTTCCAACGCTgtgatctgtttttttaatatttgaccTAATTGGAAATCAAACCCTGGTTCACATGATCCAgctcttttccttcttctctcaGGGGAAATAAGTAATTGTCTTGTACTTTTACTGTGTTCATAGCTATtacctgtgatttttttttaatgcagattttctttattacatttaattaaaatctgaacaATGGTGCTCAGGCCTCTGAAAAcctaaaaaatactttaaatctgtgaaaaagcATATATCTGAATATATACACATGGCGTCTTTTAAATGAGATCTATGACTGTAATGTGAGGACTGATCACTAGCATTTGccaagaaaaaaggaaaactaatgTAGTGGAGGTTTGTTTTCATAGTCCTCTACAGTACTGAAATTCTCACAGACATGTCtgatatgcatttatattgcCCACTGAAATTGTGGTGTGGAAAATGTACATCTGGGCAGCTAATAACTATATTGGCAGCTGATGTTATGGATGTGTGTACAATTGTAATTGTGCCCATATATTGATCTGCTCAGAAATACTTGCTCAAACCACATGGCACCAGAGTCTGTGCCTGGTGTCTGTGAGAAAGTATATTTTTGACCGTTAAATATTTGACACATCTGGGCaacaaatcttattttatataacattgtGATGATATTTTGGGATTATGCTGATTTTTTCCCAGTCAGTGTCCCTCCACAGCCCCGATATCCTGTAGTTTAGTTTATGATATGgattttgtttctaatgtacttctgtatttgtatatatgttcaTGTTCTTTGTGTGTCACAACGCTGTCAATGTAGTCCTCTATCGACGGGTGCTTCACTGGTGTAGtagaattatatttttgctaaaAAGAACATCGTGTAAATAAACTAGTAAAGCAAGCAACACAT

Function

GO:

id name namespace
GO:0005488 binding molecular_function

KEGG:

id description
K10400 KIF15; kinesin family member 15

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002484 True 4784 mRNA 0.49 31 16754096 16769522

Neighbor

gene id symbol gene type direction distance location
AMCG00002483 gpd1l,LOC108434205,LOC103034694,LOC105023484 coding upstream 3500 16736684 ~ 16750596 (+)
AMCG00002482 LOC102294068,LOC100692553,LOC101478849 coding upstream 102690 16621519 ~ 16651406 (+)
AMCG00002480 NA coding upstream 183669 16535647 ~ 16570427 (+)
AMCG00002479 NA coding upstream 294885 16343098 ~ 16459211 (+)
AMCG00002478 rbms3,LOC106588200,LOC107713827,LOC107600516,LOC107730162 coding upstream 417377 16270456 ~ 16336719 (+)
AMCG00002485 tmem42,LOC107394544,LOC103356608 coding downstream 180 16769702 ~ 16774759 (+)
AMCG00002489 NA coding downstream 10306 16779828 ~ 16790437 (+)
AMCG00002498 exosc7,LOC107693297 coding downstream 43939 16813461 ~ 16819588 (+)
AMCG00002497 NA coding downstream 52177 16821699 ~ 16824223 (+)
AMCG00002494 lars2 coding downstream 86985 16856507 ~ 16900912 (+)
G123526 NA non-coding upstream 99212 16653499 ~ 16654884 (+)
G123525 NA non-coding upstream 102132 16651542 ~ 16651964 (+)
G123468 NA non-coding upstream 264144 16485826 ~ 16489952 (+)
G123388 NA non-coding upstream 958947 15794408 ~ 15795149 (+)
G123386 NA non-coding upstream 1064133 15689601 ~ 15689963 (+)
G123568 NA non-coding downstream 22578 16792100 ~ 16792799 (+)
G123653 NA non-coding downstream 322453 17091975 ~ 17148336 (+)
G123659 NA non-coding downstream 367891 17137413 ~ 17141435 (+)
G123797 NA non-coding downstream 926338 17695860 ~ 17760195 (+)
G123808 NA non-coding downstream 1157177 17926699 ~ 17940633 (+)
AMCG00002437 pcbp3,LOC108266078,LOC107657516,LOC107728912 other upstream 2392560 14327632 ~ 14361536 (+)
AMCG00002393 NA other upstream 3624399 13125378 ~ 13129697 (+)
AMCG00002388 NA other upstream 3683264 13044693 ~ 13070832 (+)
AMCG00002390 NA other upstream 3702125 13031759 ~ 13051971 (+)
G122746 NA other upstream 4613631 12133786 ~ 12140465 (+)
AMCG00002500 snrpd1,LOC105910057,LOC107655105,LOC107559756 other downstream 188639 16958161 ~ 16960082 (+)
AMCG00002496 NA other downstream 206766 16976288 ~ 16985906 (+)
G123807 NA other downstream 1145914 17915436 ~ 17984730 (+)
G123989 NA other downstream 2062492 18832014 ~ 18838531 (+)
AMCG00002562 LOC106579813 other downstream 2304171 19073693 ~ 19127947 (+)

Expression


Co-expression Network