AMCG00002613


Basic Information

Item Value
gene id AMCG00002613
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 22947203 ~ 22951828 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002613
ATGACCTCTGAGGGCAGGGGCCACTCCGTCAACTGGTACCTGAGACCCAAGCAGGTGGGCAAGGTGAAGAAGCGGGTGCAGGAGATGAAATACCAGTCCTGCACGCTGTCCAAGATCGACCTGAGCCACAATGAGAGCGTCCGGCTCGCCACCGACGCCCTGCTGGACAGAGGGCTGCTGGCTTACGAGAAAGTGCTCGTTTCGGAGGGGGAGGTGGACTTCCTGTCCCAAGCCGAGAAAGAGTACATCCTGAGGAACACCACTGAGCCCCCTGGAGTCGGGGAGAGCCCAGCAGAGGAGGTACAGGGGGTAACTGCACCGTCTGTTGACACATCTGTCACATACTTCCCTGACATCTCTGAGAGTGAAGCCCCGGCTTTGGACTATGGCTGGCCTATGGAGGAGAGAAGCTACTATCTGCAAGGGAGACCCCGAGTGGAGGTTTATTTCCAAACGGACAGATCCAGGAACATAAAAGACCTGTTGCGCGAGTACATCAACAAAGCTACTATGGTGCTGGCAATAGTGATGGATGTCTTCAGCGATACTGAGATTTTCTGTGACATCCTGGAGGCGACCAAAAAGCGCAACGTCTTCGTCTACCTGCTGCTTGATCACACGCACCTGTCTCTGTTCAGTGAAATGTGCGAGAAACTACAGATCAACAGTTCCCACCTCACAAAAATGTCTATCCGCAGCGTGTGCGGAGAGACCTACTGTTCGAAGTCTGGGAAGAAATTCTCTGGTCAGATAAAGGAGAACTTCGTCATTATTGACTGCACCCACGTGCTCGTTGGATCTTACAGCTTCACGTGGCTGTCGGGGCAGGTGCACAGAAACCTGGCAGTGCTCTTCAAAGGAAGCAGCGTGAAGCCCTTTGACCTGGAGTTCCGGCAGCTCTACGCCATGTCTAAGCCTCTGAGCGCCTTCCCCTGCAGTGGCTCCCAAGCGCACTACAGCACCGGGGAAATGCCACTGTCCACGACCCAGAAGCCCAGCGTCACCTCCCAGTCAAACCCCAGCGTCACGTTATCTGGATGCAGCAGCCCCGCTCCACAGTACACCCCTGCCACCGGAGTAACAGGCTGGTTTTCAGACCCAAAACCTCCTATCACACCCCCACACGCAGCCAAGGGGCACAAACAGACCTACCAGGCATCCCCCCGGGCACACTGGCTGCCACAGATGCACAACTTTACCCCACCCACTGCCCGTCAGAGGTCCTACTCCAGCGATTACGCCACAGGGAACACGACACGGCCCTATCTCAACAACATGTTTGGGATGAAATCAGGGAGGCCCTCCAACCACACTCCCAGGCTCACGTCAGGTTTCCACTACCTTAACAAACCAGACCTCATACCACCGTAG

Function

GO: NA

KEGG:

id description
K23930 FAM83; protein FAM83

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002613 True 1371 mRNA 0.56 4 22947203 22951828

Neighbor

gene id symbol gene type direction distance location
AMCG00002612 LOC103360969 coding upstream 1282 22927289 ~ 22945921 (+)
AMCG00002618 NA coding upstream 40691 22904029 ~ 22906512 (+)
AMCG00002609 NA coding upstream 350915 22564822 ~ 22596288 (+)
AMCG00002607 NA coding upstream 399063 22484287 ~ 22548140 (+)
AMCG00002604 deptor,LOC107685573,LOC107673035 coding upstream 510396 22394260 ~ 22436807 (+)
AMCG00002621 NA coding downstream 45045 22996873 ~ 22999485 (+)
AMCG00002619 NA coding downstream 76808 23028636 ~ 23033585 (+)
AMCG00002624 NA coding downstream 91996 23043824 ~ 23055716 (+)
AMCG00002620 NA coding downstream 104954 23056782 ~ 23067800 (+)
AMCG00002630 NA coding downstream 455738 23407566 ~ 23407966 (+)
G124601 NA non-coding upstream 34524 22859923 ~ 22912679 (+)
G124590 NA non-coding upstream 294261 22652726 ~ 22652942 (+)
G124534 NA non-coding upstream 508422 22436949 ~ 22438781 (+)
G124494 NA non-coding upstream 609245 22333949 ~ 22337958 (+)
G124408 tatdn1 non-coding upstream 1136382 21805620 ~ 21810821 (+)
G124658 NA non-coding downstream 38743 22990571 ~ 22991760 (+)
G124666 LOC106595597,LOC106595600,LOC106597717,LOC105016543 non-coding downstream 49960 23001788 ~ 23002232 (+)
G124667 NA non-coding downstream 51163 23002991 ~ 23003252 (+)
G124668 NA non-coding downstream 59607 23011435 ~ 23012000 (+)
G124687 NA non-coding downstream 266502 23218330 ~ 23276775 (+)
AMCG00002573 NA other upstream 2614173 20241848 ~ 20333030 (+)
AMCG00002561 NA other upstream 3813636 19130067 ~ 19133567 (+)
AMCG00002562 LOC106579813 other upstream 3819256 19073693 ~ 19127947 (+)
G123989 NA other upstream 4108672 18832014 ~ 18838531 (+)
G123807 NA other upstream 4962473 17915436 ~ 17984730 (+)
AMCG00002622 NA other downstream 35717 22987545 ~ 22990164 (+)
AMCG00002623 sqle,LOC106579093,LOC106605546,LOC107686341 other downstream 116296 23068124 ~ 23180043 (+)
G124689 NA other downstream 200820 23152648 ~ 23290535 (+)
G124769 NA other downstream 726107 23677935 ~ 23681385 (+)
G124863 NA other downstream 1470424 24422252 ~ 24422613 (+)

Expression


Co-expression Network