Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00002621 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 22996873 ~ 22999485 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0005840 | ribosome | cellular_component |
| id | description |
|---|---|
| K02911 | RP-L32, MRPL32, rpmF; large subunit ribosomal protein L32 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00002621 | True | 954 | mRNA | 0.43 | 3 | 22996873 | 22999485 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002613 | NA | coding | upstream | 45045 | 22947203 ~ 22951828 (+) |
| AMCG00002612 | LOC103360969 | coding | upstream | 50952 | 22927289 ~ 22945921 (+) |
| AMCG00002618 | NA | coding | upstream | 90361 | 22904029 ~ 22906512 (+) |
| AMCG00002609 | NA | coding | upstream | 400585 | 22564822 ~ 22596288 (+) |
| AMCG00002607 | NA | coding | upstream | 448733 | 22484287 ~ 22548140 (+) |
| AMCG00002619 | NA | coding | downstream | 29151 | 23028636 ~ 23033585 (+) |
| AMCG00002624 | NA | coding | downstream | 44339 | 23043824 ~ 23055716 (+) |
| AMCG00002620 | NA | coding | downstream | 57297 | 23056782 ~ 23067800 (+) |
| AMCG00002630 | NA | coding | downstream | 408081 | 23407566 ~ 23407966 (+) |
| AMCG00002631 | NA | coding | downstream | 653487 | 23652972 ~ 23677437 (+) |
| G124658 | NA | non-coding | upstream | 5113 | 22990571 ~ 22991760 (+) |
| G124601 | NA | non-coding | upstream | 84194 | 22859923 ~ 22912679 (+) |
| G124590 | NA | non-coding | upstream | 343931 | 22652726 ~ 22652942 (+) |
| G124534 | NA | non-coding | upstream | 558092 | 22436949 ~ 22438781 (+) |
| G124494 | NA | non-coding | upstream | 658915 | 22333949 ~ 22337958 (+) |
| G124666 | LOC106595597,LOC106595600,LOC106597717,LOC105016543 | non-coding | downstream | 2303 | 23001788 ~ 23002232 (+) |
| G124667 | NA | non-coding | downstream | 3506 | 23002991 ~ 23003252 (+) |
| G124668 | NA | non-coding | downstream | 11950 | 23011435 ~ 23012000 (+) |
| G124687 | NA | non-coding | downstream | 218845 | 23218330 ~ 23276775 (+) |
| G124740 | NA | non-coding | downstream | 422488 | 23421973 ~ 23436320 (+) |
| AMCG00002622 | NA | other | upstream | 6709 | 22987545 ~ 22990164 (+) |
| AMCG00002573 | NA | other | upstream | 2663843 | 20241848 ~ 20333030 (+) |
| AMCG00002561 | NA | other | upstream | 3863306 | 19130067 ~ 19133567 (+) |
| AMCG00002562 | LOC106579813 | other | upstream | 3868926 | 19073693 ~ 19127947 (+) |
| G123989 | NA | other | upstream | 4158342 | 18832014 ~ 18838531 (+) |
| AMCG00002623 | sqle,LOC106579093,LOC106605546,LOC107686341 | other | downstream | 68639 | 23068124 ~ 23180043 (+) |
| G124689 | NA | other | downstream | 153163 | 23152648 ~ 23290535 (+) |
| G124769 | NA | other | downstream | 678450 | 23677935 ~ 23681385 (+) |
| G124863 | NA | other | downstream | 1422767 | 24422252 ~ 24422613 (+) |
| AMCG00002650 | NA | other | downstream | 1762399 | 24761884 ~ 24776815 (+) |
