AMCG00008756


Basic Information

Item Value
gene id AMCG00008756
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 10958584 ~ 10972379 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008756
CACCAGTGACAGTGCCGGCGGGTCTTCCACCAGGAATCAAATCGTGCAGGTGCCGAGAAGTGTCTGTGTCGGAGGTGTTCGGCCGTGGCAGTGATGTGCTCCCTGGCTCTGTTTCCCCCACTGTCCCCCACCAAAGGTCAGGTGACCCTGTATGAGTCCAACAATGAGCTGGTGTCAGGCACGCTGGACAGCTATCAGAGACAGGATGGGGACCCCCTGTCGGTGATGATCCCCAAGGAGAGCCTGAAGCCCCACTGCCGGTTGGAGAGCAGCAGCAAGACGGCGTTCATCGACCACGTGGAGACGCTGTGGATGAGGAGCGCCAATGCCTGGAGGGACGCGGGGTTCTGTGGACTCCTCAATGAAATCGCCAACTCTGTGGATGAAGttcCCAGGTGGCTGGCTGTAGGCTCTGGTTTTAGTCTGGCTCTTCTGCGATGGGTTTCCTCTCTCCACGGCTCCCTCTTCCCCCACCTCAGCCTGAGCAGCGAGGACATGGTGGCCGAGTTCTCCCAGGTGCTGGCCTGGTCCGGCTGCTCGGTGCGTAGCTTTGCCTGGCACCCCCACACCGACAAGTTCGCCGTGGCGCTCCTGGACGACTCCATCAGGGTGTACAACTCCAAGAGTCCCACCGCACCTACCCTGAAGCACCGCCTCCAGAGGAGTGTGGCATCGCTGGCCTGGAAGCCGCTGTGTGCGTCGGCGCTGGCGGTAGCCTGTCAGAACTGCGTGCTGGTGTGGCATGTTGACCCCACCTCCCTCTCCACCAGGCCGTCCTCGGGCTGTGCCCAGGTGCTCTCTCACCCTGGCCACTCTCCCGTCACCTCCCTGGCCTGGGCGCCCAGCGGTTCAATCCTGCTGACTGCCTCCCCTGTGGACACTGCCATGATGgtGTGGGACGTGGCCGCAGAGAGCTGTGTTCCCCTCCAGAGAGTGGGTGGTGGGGGCGTGACCTTCCTGTCCTGGTCTCCCGACGGCGGCAGGGTCCTGGCTGCCACGCCTTCTGCCCTCTTCAGAGTCTGGGAGACGGGGATGTGGACGTGCTGCTGGAGTCCGGACGGGTCGCGCCTGCTGTTCTGTGTGCAGGGAGAAGCGCTGATCTATGCCCTGACCTTCGATGACACCCTGGgAGAGCCATTAGGCGGAGCCGGAGGGTCAAAGGCTGCTGCGATCGTGGCCGACCTGTCCGAGACCACCTTCCAGACGGCCGATGGACAGATCAGGGTCGGAGGGGACGTGCAGTCGCTGGTGTGGGACTCCAGCGGAGAGCGGCTGGCGGTGCTTCTTAAAGGTGACCCACAGAAAGCAGACAGCCCTGCCACCATCGCTGTCTTTAAGACTCGCAGCAGCCCTGTGTTTGAGCTCCTGCCCTGTGGTTTTGTCCAGGGGGAGACAGGTGCCGAGCCGAGGTTGATGCAGTTCCACCCCCACTTTGAGAAGGGAGCCCTGCTGACCGTGtgctggtccaatgggaggATCTCACACATCCCCTTCTACTTCGTGAGTGCAGGGGGGCCCCGACCCGGCCTGGGGGCCAGCCCTCCCTACCCCCTGCGCAGGGCGGCTGAGAATGGAGAGAGGCTGCTGTACACGGAGCTGAGCTTGTAGAGGAATCCTGATCCAGGCAGCCGCTGAGAGCACTACATCTGGTAGTCGtctcccaccccaccccaacccAACCCCTGGCCCAGACTGAAAGCTACAGACTGTCCCAAAGGGGATCCCCACTGCTACTCGAGTGGATCTCGGTTTCAAATGACTGGTGCCACACCCGTTTCCCTCCCACTGTGTTTGACTGCCTTTTAAGATGGAGTCTGAATTATCTTTGACTAGTTAAGGCTCATTAACTTGTTTCAATTGCTGCTGAGACGGGTATTGGACTGTTTAAGGATGCACTGTGTGTGGGTTTGGTGACATTAATGGAGACGCACATTGGAAGAAATGTTTGGTCTTTAACTATTGTCACCCTCACATTCTGGCCAGTGGTTGACTGTATCCCCTTAACGCATCGAATGAGTGCAGAATCATGGCCAGCAGCTTTGGTGTATGGAGGTGCTGTGTGACTGCTTTAAATTCAAGGAATGCTTAAGGGTAGAAGTGCTTGCAAACTTGGTGTATCATGTGAGCGGCCAGAGAAATGCCTCCTGCCTGTCCCCTGTGAGAGGAGGGCTGCTGTGATGGGTGGTCGGGTGGGCACAGAGCAATTTGCATTTGaccaatattaaaaaataaatggggagAAATAAGTCAAGTGTAAGTATCTGTTCCCCCCACCCTCTCCGTTtcctatgtgtgtgtttgctggctGTAAGATGTCTGAGCTCGGTGCAGAGAGCATAGATAGCTTGCTAACCATGTTCATGGCATTTCCACAAGAATCTCCCAGACTCTCTTGGTCTGTCTCAATCCTGTGAGGAGGGGGGGGAAGTGTGGGTACCCATAAGTGTTTTTTG

Function

GO: NA

KEGG:

id description
K14320 AAAS; aladin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008756 True 2453 mRNA 0.58 17 10958584 10972379

Neighbor

gene id symbol gene type direction distance location
AMCG00008751 krt8,LOC105023875,LOC107551542,LOC108411779,LOC107681390 coding downstream 186930 10764016 ~ 10771654 (-)
AMCG00008750 e3,LOC108429286,LOC106565226,LOC107705699 coding downstream 233408 10719492 ~ 10725176 (-)
AMCG00008747 NA coding downstream 296393 10655011 ~ 10662191 (-)
AMCG00008743 LOC103045919,LOC106565233,LOC102299085,LOC100696631,LOC102216220 coding downstream 468818 10472530 ~ 10489766 (-)
AMCG00008739 NA coding downstream 700733 10221420 ~ 10257851 (-)
AMCG00008765 NA coding upstream 31777 11004156 ~ 11011571 (-)
AMCG00008763 pcbp2,LOC100691124,LOC103464415,LOC106956729 coding upstream 49169 11021548 ~ 11035727 (-)
AMCG00008761 NA coding upstream 65923 11038302 ~ 11044119 (-)
AMCG00008764 NA coding upstream 72584 11044963 ~ 11051426 (-)
AMCG00008762 NA coding upstream 89908 11062287 ~ 11073591 (-)
G51261 eif4b non-coding downstream 118912 10839106 ~ 10839672 (-)
G51251 krt18,LOC107727028,LOC107551541,LOC100692632,LOC102212553 non-coding downstream 154875 10801108 ~ 10803709 (-)
G51243 NA non-coding downstream 284729 10668711 ~ 10673855 (-)
G51120 NA non-coding downstream 1027482 9927245 ~ 9931102 (-)
G51103 LOC106928590,LOC103386378,LOC107385311,LOC106514726 non-coding downstream 1047784 9909611 ~ 9910800 (-)
G51344 NA non-coding upstream 85298 11057677 ~ 11140273 (-)
G51354 LOC100846954 non-coding upstream 190967 11163346 ~ 11164374 (-)
G51403 NA non-coding upstream 254108 11226487 ~ 11258218 (-)
G51574 NA non-coding upstream 1030546 12002925 ~ 12010394 (-)
G51588 NA non-coding upstream 1108833 12081212 ~ 12093785 (-)
G51250 NA other downstream 159430 10797632 ~ 10799154 (-)
AMCG00008748 LOC107666380,LOC108429286,LOC107705699,LOC107681386,LOC107559866 other downstream 240383 10670949 ~ 10718201 (-)
G51241 NA other downstream 246099 10675756 ~ 10712485 (-)
AMCG00008744 NA other downstream 355211 10560866 ~ 10603373 (-)
AMCG00008741 hdac7,LOC107704627,LOC107752451 other downstream 588268 10338325 ~ 10370316 (-)
AMCG00008777 dctn2,LOC102785932 other upstream 263263 11235642 ~ 11326359 (-)
AMCG00008815 NA other upstream 1628912 12601291 ~ 12605260 (-)
G51797 NA other upstream 1918432 12890811 ~ 12891597 (-)
G51799 NA other upstream 1922956 12895335 ~ 12897134 (-)
G51867 NA other upstream 2028447 13000826 ~ 13001888 (-)

Expression


Co-expression Network