G50055


Basic Information

Item Value
gene id G50055
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 4462362 ~ 4468763 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU62622
AGCTGCTGTCTGTGGAACCAAATCTGTTGTGATTCTATACATCCTTGTGCTGATTACCTCTGCAGTGTGGACTGTCTCCATCATCATGGTAATCACTAAGTatTCTGCAATGTCAAAAGAGATTGAGCACTTGAAAGAGATGCACAGTGCTTGGACATCAAATGGCTCTCTGGTTTCTTCAGATGTTGAGAAGATCAAAACTCAAGTTTCAGTGCTCAACACCAATgACAAATCAATTTCTTCAGTCATACAGAACATCAGTTCTCAGATTGCGCATCTCAACACTAAAGactgtgttaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU62622 True 300 lncRNA 0.40 5 4462362 4468763

Neighbor

gene id symbol gene type direction distance location
AMCG00008569 NA coding upstream 364206 4097796 ~ 4098156 (+)
AMCG00008559 NA coding upstream 438869 4022525 ~ 4023493 (+)
AMCG00008560 NA coding upstream 452217 4009198 ~ 4010145 (+)
AMCG00008555 NA coding upstream 501312 3957541 ~ 3961050 (+)
AMCG00008556 gcdh,LOC102794743,LOC100704678 coding upstream 522449 3934002 ~ 3939913 (+)
AMCG00008579 NA coding downstream 42227 4510990 ~ 4512060 (+)
AMCG00008588 NA coding downstream 331691 4800454 ~ 4812907 (+)
AMCG00008587 NA coding downstream 355364 4824127 ~ 4835656 (+)
AMCG00008590 NA coding downstream 430682 4899445 ~ 4904073 (+)
AMCG00008593 LOC107093428 coding downstream 573991 5042754 ~ 5055756 (+)
G50011 NA non-coding upstream 153526 4307826 ~ 4308836 (+)
G49944 NA non-coding upstream 427310 4034749 ~ 4035052 (+)
G49938 NA non-coding upstream 436116 4025101 ~ 4026246 (+)
G49914 NA non-coding upstream 498348 3963128 ~ 3964014 (+)
G49753 NA non-coding upstream 1017235 3444002 ~ 3445127 (+)
G50061 NA non-coding downstream 19236 4487999 ~ 4488238 (+)
G50066 NA non-coding downstream 46733 4515496 ~ 4527552 (+)
G50086 NA non-coding downstream 114139 4582902 ~ 4583205 (+)
G50142 NA non-coding downstream 448240 4917003 ~ 4917257 (+)
G50153 NA non-coding downstream 501246 4970009 ~ 4970248 (+)
G49982 NA other upstream 296879 4162058 ~ 4165483 (+)
G49980 NA other upstream 302300 4156088 ~ 4160062 (+)
AMCG00008526 NA other upstream 576758 3429897 ~ 3885604 (+)
G49583 smarca4,LOC102779508 other upstream 1573466 2886766 ~ 2888896 (+)
G49523 NA other upstream 1692318 2765879 ~ 2770044 (+)
AMCG00008580 pnpla6,LOC106564686 other downstream 93228 4561991 ~ 4572874 (+)
G50215 NA other downstream 1127260 5596023 ~ 5596799 (+)
G50243 NA other downstream 1269778 5738541 ~ 5742750 (+)
G50448 NA other downstream 2488848 6957611 ~ 7018125 (+)
AMCG00008639 NA other downstream 2828123 7296886 ~ 7315850 (+)

Expression


Co-expression Network