G49523


Basic Information

Item Value
gene id G49523
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 2765879 ~ 2770044 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU61936
GTGCAGCAGAAGAGCGAGGGAGAGATGTTTCCTTGCGAGGCCCAGCAGGAGACTCTCGGAACTACAGAACACCCACTCTGGCATTCCTGCCACTTCCCCGACAGCAGCCAATGCGGGAGAGCTTTTTCATACCAGCTTTTCCTGACAAGTACGAGATGGGCGCAGGTGCGGTGATGACATCTCACCCAGTGCCACGCCTGTCTGGACCCACAGAGAGGTTCAAACCCCAGACTCGTCAGTCACATCCCAGCCCCCGCCTCGGGCTGCGTCCCATTTCGATAACAACGCAGCCGGCCATGCTGCAGGCGGGGAACCTGCTCACCTTCCCAGCGACAGCCCCTGAGGACTGAGGGCTCTTGTTCTGGCTTTAAATGTTGAGCTAAAAAGTCACAGTTTTGTGTGAGAGGGCGGAGGGTGGAAACAGCTCTTTGAATGCACCCAGATAGTCTTCCTGCTTTTATAAACAAGATCCTGCTTTAACTTTCACACTTTCTGCACTGTAGTTCCCATGAGAGTTTAATTGTGTTGTCAAAAGTCTCTAATAAGTCggtaattcaataaataaacaaaccacatcTATTGAACGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU61936 True 588 TUCP 0.52 2 2765879 2770044

Neighbor

gene id symbol gene type direction distance location
AMCG00008493 NA coding upstream 45218 2715820 ~ 2720661 (+)
AMCG00008489 elavl3,LOC102780136 coding upstream 135680 2616463 ~ 2630199 (+)
AMCG00008487 NA coding upstream 249370 2515229 ~ 2516509 (+)
AMCG00008483 NA coding upstream 335098 2424395 ~ 2430781 (+)
AMCG00008485 NA coding upstream 343870 2420340 ~ 2422009 (+)
AMCG00008499 NA coding downstream 17824 2787868 ~ 2793880 (+)
AMCG00008498 keap1 coding downstream 28496 2798540 ~ 2811299 (+)
AMCG00008497 NA coding downstream 45352 2815396 ~ 2823096 (+)
AMCG00008505 NA coding downstream 134515 2904559 ~ 2906941 (+)
AMCG00008509 NA coding downstream 224897 2994941 ~ 3003560 (+)
G49431 NA non-coding upstream 301212 2445185 ~ 2464667 (+)
G49341 NA non-coding upstream 552386 2212429 ~ 2213493 (+)
G49321 NA non-coding upstream 557402 2163319 ~ 2208477 (+)
G49294 NA non-coding upstream 855460 1908823 ~ 1910419 (+)
G49270 NA non-coding upstream 917141 1815584 ~ 1848738 (+)
G49541 NA non-coding downstream 42130 2812174 ~ 2812893 (+)
G49582 NA non-coding downstream 115787 2885831 ~ 2886138 (+)
G49598 NA non-coding downstream 139618 2909662 ~ 2910628 (+)
G49599 NA non-coding downstream 140650 2910694 ~ 2910939 (+)
G49636 LOC106607037,LOC105028343,LOC103364966,LOC106607038 non-coding downstream 257934 3027978 ~ 3042595 (+)
G49340 cdc37 other upstream 554365 2209483 ~ 2211514 (+)
AMCG00008476 NA other upstream 622485 2127715 ~ 2143394 (+)
AMCG00008475 NA other upstream 658087 2088480 ~ 2107792 (+)
AMCG00008473 NA other upstream 690230 2062556 ~ 2075649 (+)
G49298 s1pr2,LOC106601285,LOC107672500,LOC107711272,LOC107587933 other upstream 829377 1930654 ~ 1936502 (+)
G49583 smarca4,LOC102779508 other downstream 116722 2886766 ~ 2888896 (+)
AMCG00008526 NA other downstream 659853 3429897 ~ 3885604 (+)
G49980 NA other downstream 1386044 4156088 ~ 4160062 (+)
G49982 NA other downstream 1392014 4162058 ~ 4165483 (+)
AMCG00008580 pnpla6,LOC106564686 other downstream 1791947 4561991 ~ 4572874 (+)

Expression


Co-expression Network