G49294


Basic Information

Item Value
gene id G49294
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 1908823 ~ 1910419 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU61609
GGCTCGTCCAGGGCATTATCGGGGTCTCCCTGGAAAAACTTTAGGTCCGAGTCGTCCAGGTATTGCCGGCAGTCCGGGCATTTGGGAGGCGGAGTCTTGGCTGGCGGTACAGGTTTCTTCTCCATAGCAGCATCTTTAGTCTCAGGCTTTTCCTCCGATTCAATCTTTAATCTCTTCTCGTCTTGTgacttctcttcctcctcctgctcttcctcctctttAGCCTTCGGCTCCTCCACTCCATTCGCTTCATCGGATTTACGCTTGGCTGGGACTTTTGAAAACATGGACAAGATTGTCGGTTGCCTCGCCGAGTTTCTGGTGACCCTTGAACTGACTGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU61609 True 343 lncRNA 0.52 6 1908823 1910419

Neighbor

gene id symbol gene type direction distance location
AMCG00008468 eif3g coding upstream 14596 1891096 ~ 1894227 (+)
AMCG00008460 NA coding upstream 19056 1884367 ~ 1889767 (+)
AMCG00008458 NA coding upstream 27861 1874037 ~ 1880962 (+)
AMCG00008461 NA coding upstream 107065 1796344 ~ 1801758 (+)
AMCG00008459 NA coding upstream 113021 1794811 ~ 1795802 (+)
AMCG00008472 NA coding downstream 120369 2030788 ~ 2046937 (+)
AMCG00008478 NA coding downstream 346038 2256457 ~ 2257456 (+)
AMCG00008479 pde4a,LOC107703358,LOC107725012,LOC107587971,LOC107674699,LOC107596808,LOC108243727 coding downstream 366372 2276791 ~ 2277090 (+)
AMCG00008484 NA coding downstream 484645 2395064 ~ 2402598 (+)
AMCG00008485 NA coding downstream 509921 2420340 ~ 2422009 (+)
G49261 NA non-coding upstream 52567 1799861 ~ 1856256 (+)
G49270 NA non-coding upstream 60085 1815584 ~ 1848738 (+)
G49271 NA non-coding upstream 69819 1838186 ~ 1839004 (+)
G49264 NA non-coding upstream 102796 1803825 ~ 1806027 (+)
G49236 NA non-coding upstream 167246 1642430 ~ 1741577 (+)
G49321 NA non-coding downstream 252900 2163319 ~ 2208477 (+)
G49341 NA non-coding downstream 302010 2212429 ~ 2213493 (+)
G49431 NA non-coding downstream 534766 2445185 ~ 2464667 (+)
G49541 NA non-coding downstream 901755 2812174 ~ 2812893 (+)
G49582 NA non-coding downstream 975412 2885831 ~ 2886138 (+)
AMCG00008451 ubl5 other upstream 280490 1625294 ~ 1628333 (+)
G49208 NA other upstream 584554 1322811 ~ 1324269 (+)
AMCG00008423 NA other upstream 940240 965838 ~ 968583 (+)
G49013 NA other upstream 1029310 876554 ~ 879513 (+)
G48846 NA other upstream 1320377 587280 ~ 588446 (+)
G49298 s1pr2,LOC106601285,LOC107672500,LOC107711272,LOC107587933 other downstream 20235 1930654 ~ 1936502 (+)
AMCG00008473 NA other downstream 152137 2062556 ~ 2075649 (+)
AMCG00008475 NA other downstream 178061 2088480 ~ 2107792 (+)
AMCG00008476 NA other downstream 217296 2127715 ~ 2143394 (+)
G49340 cdc37 other downstream 299064 2209483 ~ 2211514 (+)

Expression


Co-expression Network