G49341


Basic Information

Item Value
gene id G49341
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 2212429 ~ 2213493 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU61672
ACCTGGTGCCTCCATCGGAACAGGCTCGGGGTGTCGATGTTGGGGTGGGTGTCATCCTCGTCGTCCGACACCTCGATGTGATCCCACACGCTGTAGTCTATCGTGGTCATCCCCGCTGCTTTCCCGCAGACCACGCCGAGCCGCACTGGACCAGACAGGCGGATACGCAGAGATAGTGACTGGCCGGTCCACACGGTGCGATGGAGGGCAGTAAAGCTGGCTTCTGTGCTCCGATGACTCCCTCCTCGCCAGGATGTTTCTGGAAATCTCTTTTGCTTCCGTTTCGGCGTGGCGTGGCGTGGCGTTGCGTGCTGCGTCACCACGCTGCGTACGAGGCATGCGCGGTTGGAGTCATGGatgacacccagctcttcctgtctttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU61672 True 383 lncRNA 0.61 2 2212429 2213493

Neighbor

gene id symbol gene type direction distance location
AMCG00008472 NA coding upstream 165492 2030788 ~ 2046937 (+)
AMCG00008468 eif3g coding upstream 318202 1891096 ~ 1894227 (+)
AMCG00008460 NA coding upstream 322662 1884367 ~ 1889767 (+)
AMCG00008458 NA coding upstream 331467 1874037 ~ 1880962 (+)
AMCG00008461 NA coding upstream 410671 1796344 ~ 1801758 (+)
AMCG00008478 NA coding downstream 42964 2256457 ~ 2257456 (+)
AMCG00008479 pde4a,LOC107703358,LOC107725012,LOC107587971,LOC107674699,LOC107596808,LOC108243727 coding downstream 63298 2276791 ~ 2277090 (+)
AMCG00008484 NA coding downstream 181571 2395064 ~ 2402598 (+)
AMCG00008485 NA coding downstream 206847 2420340 ~ 2422009 (+)
AMCG00008483 NA coding downstream 210902 2424395 ~ 2430781 (+)
G49321 NA non-coding upstream 3952 2163319 ~ 2208477 (+)
G49294 NA non-coding upstream 302010 1908823 ~ 1910419 (+)
G49261 NA non-coding upstream 356173 1799861 ~ 1856256 (+)
G49431 NA non-coding downstream 231692 2445185 ~ 2464667 (+)
G49541 NA non-coding downstream 598681 2812174 ~ 2812893 (+)
G49582 NA non-coding downstream 672338 2885831 ~ 2886138 (+)
G49598 NA non-coding downstream 696169 2909662 ~ 2910628 (+)
G49599 NA non-coding downstream 697201 2910694 ~ 2910939 (+)
G49340 cdc37 other upstream 915 2209483 ~ 2211514 (+)
AMCG00008476 NA other upstream 69035 2127715 ~ 2143394 (+)
AMCG00008475 NA other upstream 104637 2088480 ~ 2107792 (+)
AMCG00008473 NA other upstream 136780 2062556 ~ 2075649 (+)
G49298 s1pr2,LOC106601285,LOC107672500,LOC107711272,LOC107587933 other upstream 275927 1930654 ~ 1936502 (+)
G49523 NA other downstream 552386 2765879 ~ 2770044 (+)
G49583 smarca4,LOC102779508 other downstream 673273 2886766 ~ 2888896 (+)
AMCG00008526 NA other downstream 1216404 3429897 ~ 3885604 (+)
G49980 NA other downstream 1942595 4156088 ~ 4160062 (+)
G49982 NA other downstream 1948565 4162058 ~ 4165483 (+)

Expression


Co-expression Network