G79466


Basic Information

Item Value
gene id G79466
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 22681665 ~ 22694959 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU99106
TGCAGTgccatgtgtattttattaagacTGCTTTACAAGGTTGAGGAGTGTTAAAGTAGTCTTCAGATccctattattttttctcttttcttccagGGTTAATAGTCAATGCATGACTTCTGttcagtcattaaaaaaattgttgCAATCACAATCAGGCTGCTAAAGGAGAGCCGAGTGTTCCCGGGACTGATTACATGGAGAGGGGTCCACTGGAGAAGCTGGGATTGAGTGGAGAAATACTGTCTTCTGCGTGTCCTTCAGACAGGGGTGAAATTAGGGAAGGTGGGGGacggagggagggggggaagcaACAGCTTTGACTCCGTTTAATGCCTGCCTGAAATGCAAGCTCATAGAGGGCAGGAAAAGGACATCTTACAGACTGACAAcaacagaggagaggagaaacgCCGAGCGATGTAACTATGCTTGGATCCTTCGGTGTATGGAACGAAGATTTGACGTGCATCTACTTCCTGCAGGCACCTTTTCTCAGACTTTCTAAAACTGCTTCTTCACCCTCCCTGTtcatttgtgtattgtttttttttccatgatgatgatttattttttcagtcaaAGACAGTACCTAACACATCCTAATTAGTCCTAGTGCAAGGCAAAGCCATCTATGTCTGAAGAAGCAAGTCAGGGATGTCAAAGAGTAAGTCTCCAGGGTTACATATGGTTTTAGAAGGCTGTTCCAGTGTTAAAAGTGTTGAACACCACAGAGAGAttgagttttaaaaatgaataacaacaaacaacaaaaaaaacaaaaaacaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99106 True 793 lncRNA 0.42 2 22681665 22694959

Neighbor

gene id symbol gene type direction distance location
AMCG00010277 NA coding downstream 151123 22452189 ~ 22530542 (-)
AMCG00010276 NA coding downstream 238136 22436424 ~ 22443529 (-)
AMCG00010275 NA coding downstream 249392 22428369 ~ 22432273 (-)
AMCG00010274 rpl17 coding downstream 319811 22357982 ~ 22361854 (-)
AMCG00010273 nkx6.1,nkx6-1,LOC107700773,LOC107706438,LOC107722812 coding downstream 327313 22350400 ~ 22354352 (-)
AMCG00010280 dusp4,LOC106563492,LOC106568147,LOC107591703,LOC107703586 coding upstream 4779 22699738 ~ 22708389 (-)
AMCG00010287 NA coding upstream 164719 22859678 ~ 22869451 (-)
AMCG00010286 NA coding upstream 292448 22987407 ~ 22996441 (-)
AMCG00010284 NA coding upstream 308056 23003015 ~ 23005446 (-)
AMCG00010285 purp,LOC105909220,LOC107708540,LOC103036944,LOC107703584,LOC108436665,LOC107681187 coding upstream 349095 23044054 ~ 23047441 (-)
G79430 NA non-coding downstream 298535 22380734 ~ 22383130 (-)
G79424 NA non-coding downstream 373345 22308118 ~ 22308320 (-)
G79407 NA non-coding downstream 582877 22096838 ~ 22098788 (-)
G79406 NA non-coding downstream 589689 22091599 ~ 22091976 (-)
G79405 NA non-coding downstream 597101 22084247 ~ 22084564 (-)
G79483 NA non-coding upstream 40036 22734995 ~ 22735440 (-)
G79541 NA non-coding upstream 401643 23096602 ~ 23097308 (-)
G79542 NA non-coding upstream 413894 23108853 ~ 23109092 (-)
G79548 NA non-coding upstream 446426 23141385 ~ 23147069 (-)
G79594 NA non-coding upstream 632029 23326988 ~ 23327361 (-)
AMCG00010271 NA other downstream 699615 21964529 ~ 21982050 (-)
AMCG00010262 shc3 other downstream 1109153 21541019 ~ 21572512 (-)
AMCG00010247 NA other downstream 1599840 21053624 ~ 21081825 (-)
G79147 cplx4,cplx4a,LOC107662952,LOC107719084,LOC107739741 other downstream 1740272 20931171 ~ 20941393 (-)
AMCG00010234 hint2,LOC106585387,LOC107720264,LOC103469931 other downstream 2486281 20188658 ~ 20195384 (-)
AMCG00010288 NA other upstream 387696 23082655 ~ 23086345 (-)
G79601 NA other upstream 664684 23359643 ~ 23364947 (-)
AMCG00010343 hook3 other upstream 2821105 25516064 ~ 25556080 (-)
AMCG00010364 inip,LOC107658659,LOC107558675,LOC107571239 other upstream 3672973 26367932 ~ 26379747 (-)
AMCG00010371 NA other upstream 3717251 26412210 ~ 26426658 (-)

Expression


Co-expression Network