G79541


Basic Information

Item Value
gene id G79541
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 23096602 ~ 23097308 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU99199
tgccgagaaagattctatcatttcttgtaaccacaattctccctaactaattactgttcaatgattaaggataggcagggccacctataatctagtgtctattaacatgtgtcaatttcagactaaacagttaaacaggaatgagaagatatttctcggcgttgacagattttatttctaaaattgtcaaacaaaacagtttaatgcaacacacatttatatttaagaaaatactaaatgatattacacattctaaagtgtatgactcacagaataacgtttctaattgatttctcaaaatgtcatgaatgataaactccaaactgttaaacttatctgaacttcattgcagagaggcctctctggcttcgggctcagataacagcacacggcacgaggtccgtgtggttgggaacaaaggcagtccggttcggctttgtccaataactccACTTCAGTTGATGCACCtagaagttggggtttcgcgaaacagagtcttttccaaacagattttccactggtttgaaggctccaaggttgtgcacaaaatcttctttgcaagcagggtttccaccgtagttacttgaagacaaagtctttgaggaaagcagggccctgttcgtttccaagggtcaagtttcttaagactcaatagctatttaaatgactgaacactttcgtattgcagtcgacttagtcaattgtcc

Function

NR:

description
PREDICTED: oligodendrocyte transcription factor 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99199 True 707 lncRNA 0.39 1 23096602 23097308

Neighbor

gene id symbol gene type direction distance location
AMCG00010285 purp,LOC105909220,LOC107708540,LOC103036944,LOC107703584,LOC108436665,LOC107681187 coding downstream 49161 23044054 ~ 23047441 (-)
AMCG00010284 NA coding downstream 91156 23003015 ~ 23005446 (-)
AMCG00010286 NA coding downstream 100161 22987407 ~ 22996441 (-)
AMCG00010287 NA coding downstream 227151 22859678 ~ 22869451 (-)
AMCG00010280 dusp4,LOC106563492,LOC106568147,LOC107591703,LOC107703586 coding downstream 388213 22699738 ~ 22708389 (-)
AMCG00010289 NA coding upstream 7552 23104860 ~ 23105966 (-)
AMCG00010294 kcnv2,kcnv2a,LOC108428855,LOC107558705,LOC106563439,LOC107726563 coding upstream 67659 23164967 ~ 23168709 (-)
AMCG00010296 NA coding upstream 78466 23175774 ~ 23201168 (-)
AMCG00010295 LOC106568140 coding upstream 115972 23213280 ~ 23229997 (-)
AMCG00010303 NA coding upstream 281052 23378360 ~ 23385105 (-)
G79483 NA non-coding downstream 361162 22734995 ~ 22735440 (-)
G79466 NA non-coding downstream 401643 22681665 ~ 22694959 (-)
G79430 NA non-coding downstream 713472 22380734 ~ 22383130 (-)
G79424 NA non-coding downstream 788282 22308118 ~ 22308320 (-)
G79407 NA non-coding downstream 997814 22096838 ~ 22098788 (-)
G79542 NA non-coding upstream 11545 23108853 ~ 23109092 (-)
G79548 NA non-coding upstream 44077 23141385 ~ 23147069 (-)
G79594 NA non-coding upstream 229680 23326988 ~ 23327361 (-)
G79595 NA non-coding upstream 230190 23327498 ~ 23331515 (-)
G79648 NA non-coding upstream 364454 23461762 ~ 23466211 (-)
AMCG00010288 NA other downstream 10257 23082655 ~ 23086345 (-)
AMCG00010271 NA other downstream 1114552 21964529 ~ 21982050 (-)
AMCG00010262 shc3 other downstream 1524090 21541019 ~ 21572512 (-)
AMCG00010247 NA other downstream 2014777 21053624 ~ 21081825 (-)
G79147 cplx4,cplx4a,LOC107662952,LOC107719084,LOC107739741 other downstream 2155209 20931171 ~ 20941393 (-)
G79601 NA other upstream 262335 23359643 ~ 23364947 (-)
AMCG00010343 hook3 other upstream 2418756 25516064 ~ 25556080 (-)
AMCG00010364 inip,LOC107658659,LOC107558675,LOC107571239 other upstream 3270624 26367932 ~ 26379747 (-)
AMCG00010371 NA other upstream 3314902 26412210 ~ 26426658 (-)
AMCG00010442 LOC107672760,LOC107738293,LOC107592320 other upstream 6855382 29952690 ~ 29961324 (-)

Expression


Co-expression Network