AMCG00010289


Basic Information

Item Value
gene id AMCG00010289
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 23104860 ~ 23105966 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010289
ATGATCAAGTACTTCAAGAAACACATACATGAACACCTGGAAGAATGTCGGATCAGGAGGACCAGACTGGTGTCTAAGGATGGGCACTGCAACATAGAGTTCAGCAGTGGGGAGTACCACATACTCTTCGCCTTCTTAATGGATTTCTGGAACACGTTCGTGGAGATCCGCTGGCGCTACGTTCTCTTCATCTTTTCTGCCTGCTCGATGGGCAGCTGGTTCACCTTCGGGCTGCTCTGGTACTCTGTTGCGAAGAACAACGGTGACCTTCTAGAGCAAAACCCCCCTGATAATCATACCCCTTGTGTGTACAATGTCCATGGACTCACCTCcgctttccttttctctctggAAACACAGACAACCATTGGATATGGTTACAGGAGTCTGACAGAAATTTGTGGGACAGCAGTCACCCTACTCATTACCCAGTCCATCATAGGGGCTGTCATCAACTGCTTCATGTGTGGAATAATTTTGTCCAAAATGTCCCTGCCCATGAAAAGAGCCAAGACTGTCTCCTTCAGCCGGACTGCAGTCATCAACAAGCAGGGAAATAAGCTGTGCCTGCTCCTGCGGGTGGCCAACCTACGCAAAAGTCTTCTCATTGGGAGCCAGATTTATGGAAAGCTCCTGACGACCTCTTTGATTCCTGATGGGGAAACGATCATCTTGGACCAAGTGAACATCGACTTCACGGTAGATGCTGGTAAGGACAACCTATTCTTCATTTGTCCTCTGACGCTGTGCCACGTCATTGACAAGACTAGTCCCTTCTTTGAGATGTCTGTGGACACACTCCACATGCAGGACTTCGAACTGGTGGTTTTCTTAGATGGTACGGCCGAACCCACCAGCTGCAGCTGCCAAGTACGGACTTCCTTCCTCCCGAGGGAGATCCAGTGGGGCTACACCTTCCTGCCCATAATTTCTCGAACCAAGGAAGGCAAATACAGGGTGGACTTCTCCAACTTCAACAAGACCAAGCAGGTGACCACTCCACACTGTGCCAAGTGCTTCTACAATGAGCATGAACAGAAAGGAAAGGACAACCTGGGTTTTGAGGAGATTGAACCCAATGATGCAGCTGATAATACAAACCTGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010289 True 1107 mRNA 0.49 1 23104860 23105966

Neighbor

gene id symbol gene type direction distance location
AMCG00010285 purp,LOC105909220,LOC107708540,LOC103036944,LOC107703584,LOC108436665,LOC107681187 coding downstream 57419 23044054 ~ 23047441 (-)
AMCG00010284 NA coding downstream 99414 23003015 ~ 23005446 (-)
AMCG00010286 NA coding downstream 108419 22987407 ~ 22996441 (-)
AMCG00010287 NA coding downstream 235409 22859678 ~ 22869451 (-)
AMCG00010280 dusp4,LOC106563492,LOC106568147,LOC107591703,LOC107703586 coding downstream 396471 22699738 ~ 22708389 (-)
AMCG00010294 kcnv2,kcnv2a,LOC108428855,LOC107558705,LOC106563439,LOC107726563 coding upstream 59001 23164967 ~ 23168709 (-)
AMCG00010296 NA coding upstream 69808 23175774 ~ 23201168 (-)
AMCG00010295 LOC106568140 coding upstream 107314 23213280 ~ 23229997 (-)
AMCG00010303 NA coding upstream 272394 23378360 ~ 23385105 (-)
AMCG00010308 NA coding upstream 293385 23399351 ~ 23416520 (-)
G79541 NA non-coding downstream 7552 23096602 ~ 23097308 (-)
G79483 NA non-coding downstream 369420 22734995 ~ 22735440 (-)
G79466 NA non-coding downstream 409901 22681665 ~ 22694959 (-)
G79430 NA non-coding downstream 721730 22380734 ~ 22383130 (-)
G79424 NA non-coding downstream 796540 22308118 ~ 22308320 (-)
G79542 NA non-coding upstream 2887 23108853 ~ 23109092 (-)
G79548 NA non-coding upstream 35419 23141385 ~ 23147069 (-)
G79594 NA non-coding upstream 221022 23326988 ~ 23327361 (-)
G79595 NA non-coding upstream 221532 23327498 ~ 23331515 (-)
G79648 NA non-coding upstream 355796 23461762 ~ 23466211 (-)
AMCG00010288 NA other downstream 18515 23082655 ~ 23086345 (-)
AMCG00010271 NA other downstream 1122810 21964529 ~ 21982050 (-)
AMCG00010262 shc3 other downstream 1532348 21541019 ~ 21572512 (-)
AMCG00010247 NA other downstream 2023035 21053624 ~ 21081825 (-)
G79147 cplx4,cplx4a,LOC107662952,LOC107719084,LOC107739741 other downstream 2163467 20931171 ~ 20941393 (-)
G79601 NA other upstream 253677 23359643 ~ 23364947 (-)
AMCG00010343 hook3 other upstream 2410098 25516064 ~ 25556080 (-)
AMCG00010364 inip,LOC107658659,LOC107558675,LOC107571239 other upstream 3261966 26367932 ~ 26379747 (-)
AMCG00010371 NA other upstream 3306244 26412210 ~ 26426658 (-)
AMCG00010442 LOC107672760,LOC107738293,LOC107592320 other upstream 6846724 29952690 ~ 29961324 (-)

Expression


Co-expression Network