AMCG00010286


Basic Information

Item Value
gene id AMCG00010286
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 22987407 ~ 22996441 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010286
CCCTCATCAACAATGGCGGAGAGTGCTACCACTGACGTAATAAAAAAGACGTAATTTCTACTGGCCAATCAGCGGGCCCCTCCTGAGCAAGCCGAAATTTTTGAATTTCTGTGTAGCGAGTATTGAGGTGTCCGGTAGTGAAAGGGGAAATACGGAACacagctttttaaattgttatatatattttagactAAACCAGAAGCAGGGCATACAAATAACGTTTAGACTTCATAGCAAGCTTTGTTCATCCGTTTCATTCATCATGCCGAACAGAAGAAGTGAGGCCTTGGCCTTTTCCCTTGTGACTGGCATTAATCTGGCCATGGCGAGGCTGGTGGACATCTGGGACAGCATCGGGATCCTGGAGGAGCAGCGGGTGGAGCGCATGGAGGCGGTGAAGAAGCACATTGATATTGATGATGGTCTGACTGTCCTGCAATTGGAGAAGGATCTGCGCACAAAAATGGAAGCACTCGCAAAAGAGAGGAATGATCGACTCAAGGAGCTGGAGAGCTTGAGGGAGGATGACAACGCCTTGTGCATAGAGTTGTGCACCACTCCCTACTACATCCCTACTGGCAGCCTGCCGTCACGCTCTCAGCTCCAGGACCTGCGAGAACACATCAAAACTCTTACAGAAGAAAAGAAAAACCGTGTGAAAGTGTTTTCTGGACTCCGACAAGATATCAGCCAGTTAATGAGTGAAATTGGCCACTCGCCTGAGACCAGTGTGGAAAAGGAGGCAGTCTGTGATGATGCAGATGTCTTCCTTCTTACCAATGAGAATATCAAAGCTCTCCAAATGTTAAAGTTCCAGCTGGAAGTTAAAAAAGATTCATTGACATTGACCCGGGGCGAACTGAAAGAGAAGGTTCTTAATCTGTGGAATCGGTTGGAATTCACGGAGCAGGAGAAGGCAGCATTTGAAGACAACCTAAAAGCCTCCTTGTCTGATGAGATTGCAGATTGGCAGAATGAGCTGGAGCgcctggaggagctgaagaaaGCTAATCTTCAAGAAGTCATTGAGAAGATCAGGATAGAACTTACAGAGTACTGGGAGACATGCAAGTTTGGTTCTGAACAAAAGAATTCCTGCACATTCTTCTTTGATGATAACTTCACTGAGGAATTGCTTACCAAGCACGATGAAGAGCTGCTTCGTGTCAAAGAGTACTACAAGAATGCCAAGCCTATGTTGGAGAATGTGGAGAGATGGGAGAAGAATTGGGTCCTTTTCCAGGATTTTGAGAGGAAGGCATCTgatccaaacagattttccaacAGAGGAGGAACGTTGCTGAAAGATGCGAAAGAAAGGGTTAAAGTCCAGAAGATGCTTCCTAAgCTGGAGGAAGATCTAAAGAGCTCCATTGAGATATGGGAAGCAGAGCAGGGTACTGAGTTTCTTATCGGAGGCCTGAGAATAATGGATTACATTGGGAGACAATGGGAAGAGCACAGATTACTGAAGGGAAAAGAGAAGAGTGAACGTGTCACAAAGAAGGATCCTTCAGTTGTGAAAACACCAGGAAAACGCCCCCACGGAGGACTGATTACAAACACGCCTAGCAAGATGAGGAAGGTTCCAGGAAATCCAAACGTCTCTGTACAGCGGGTAACGAGTACCAGCTCCAGCAGCTCCAGTAATAACAGCACTGCTAGCACCTTTAACAGTGTGAGCGGTAAACCCCCTCTCTCTACATCCAAGGCCCAGCAGAAGAACAGATTTTTGGATGTTTCTCAAAGGACACCATTGCAAGAATTCAACAGTGAGAAAAAGCATGTTAAAATTGGCAGTTACACAGAGTTTACCAAAGAACTTGCACAGAAGTCACAGAATCTAGAAGCTGTTCTGAACTCCACCACAAAGGATATCCTCAaataatgtcaaaatgtttgtttttaattttctccacTCTTTCAACTTGGCATCAAGCATTTGTTTCTGCACCAACAATGACTTATGAATGTCATTCTGCAGACTTAGGTTTCTGGTCCCAATCAGGTCAATGTTATAAATGtgacttatttttttacctttgaGGTATTAATTGATGGTTGTATCTTGCCGtctcttgttttttcttatctAGGTTTGGGTCACTTTGCATTTCAGTTATTGCACATTTCAATAGTTGTCtagcttttaatttcagagtaatGCAATATGTTTGAAAAAGTTCCTAGCAGCAGACTATTACATTGAATTAATGTCACTCTTTTGTTAAGTCAATTTTGATGAGACcttggagagagaaacaaagcattttgctttttttaaatggggatttttctttttgtttttacctggCACGTACAAAACGTCATATCATACTGCATTAATTTTATAAAGAATACCAAGGCAAACTTATATTTAACAGAAGGCCACAGATAATGCCAACtaatatacatttgaacaaatgaaatgttaagTCTATGGACTAAATGTGGTGCCACTGAACACAAGCTTTACAGTTTGCTGATTGGTCTGTTAAATATCACGCCTTGAACTATGCATTTAGATGCTGGTCAGGTAGTTTGTACCGAGGTAACAATGGTTGCAAACCTCTGGAGATATTTAAAGTGTGGCtgatatgattacattttttaagcattttaaaatgcagggcAATGCTGCATTGATTGTATGGCTTTTAACTTATTGTTTTACCCACCTATAACTAATGCCCATTGTAAGCAATGGTGAACAAAACCATAAGGGATTATAAATGATTTGCTCAATTTTAGGTCTGACTTCTCAGAACAAGATTAGCTCTACTCTTAGATAACCTGATTAGCTCATcgaagactagtgctaatcattGGCTGTGAAACCAAAAGTTAATGTATTGCTGGCTCCTCCAGAATGATGTtcttcatacatttcaaaatctttttttttttatataaagaaaatcttctgtgtaaatattttctaCTCTTCTGttggagttttgtttttatgtaaagatTTCTATTGCTTctctaaatattgttttgtgcatCTTCTAATAAATGTATCTAAATATGTA

Function

GO: NA

KEGG:

id description
K16732 PRC1, ASE1, MAP65; Ase1/PRC1/MAP65 family protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010286 True 3035 mRNA 0.41 13 22987407 22996441

Neighbor

gene id symbol gene type direction distance location
AMCG00010287 NA coding downstream 117956 22859678 ~ 22869451 (-)
AMCG00010280 dusp4,LOC106563492,LOC106568147,LOC107591703,LOC107703586 coding downstream 279018 22699738 ~ 22708389 (-)
AMCG00010277 NA coding downstream 456865 22452189 ~ 22530542 (-)
AMCG00010276 NA coding downstream 543878 22436424 ~ 22443529 (-)
AMCG00010275 NA coding downstream 555134 22428369 ~ 22432273 (-)
AMCG00010284 NA coding upstream 6574 23003015 ~ 23005446 (-)
AMCG00010285 purp,LOC105909220,LOC107708540,LOC103036944,LOC107703584,LOC108436665,LOC107681187 coding upstream 47613 23044054 ~ 23047441 (-)
AMCG00010289 NA coding upstream 108419 23104860 ~ 23105966 (-)
AMCG00010294 kcnv2,kcnv2a,LOC108428855,LOC107558705,LOC106563439,LOC107726563 coding upstream 168526 23164967 ~ 23168709 (-)
AMCG00010296 NA coding upstream 179333 23175774 ~ 23201168 (-)
G79483 NA non-coding downstream 251967 22734995 ~ 22735440 (-)
G79466 NA non-coding downstream 292448 22681665 ~ 22694959 (-)
G79430 NA non-coding downstream 604277 22380734 ~ 22383130 (-)
G79424 NA non-coding downstream 679087 22308118 ~ 22308320 (-)
G79407 NA non-coding downstream 888619 22096838 ~ 22098788 (-)
G79541 NA non-coding upstream 100161 23096602 ~ 23097308 (-)
G79542 NA non-coding upstream 112412 23108853 ~ 23109092 (-)
G79548 NA non-coding upstream 144944 23141385 ~ 23147069 (-)
G79594 NA non-coding upstream 330547 23326988 ~ 23327361 (-)
G79595 NA non-coding upstream 331057 23327498 ~ 23331515 (-)
AMCG00010271 NA other downstream 1005357 21964529 ~ 21982050 (-)
AMCG00010262 shc3 other downstream 1414895 21541019 ~ 21572512 (-)
AMCG00010247 NA other downstream 1905582 21053624 ~ 21081825 (-)
G79147 cplx4,cplx4a,LOC107662952,LOC107719084,LOC107739741 other downstream 2046014 20931171 ~ 20941393 (-)
AMCG00010234 hint2,LOC106585387,LOC107720264,LOC103469931 other downstream 2792023 20188658 ~ 20195384 (-)
AMCG00010288 NA other upstream 86214 23082655 ~ 23086345 (-)
G79601 NA other upstream 363202 23359643 ~ 23364947 (-)
AMCG00010343 hook3 other upstream 2519623 25516064 ~ 25556080 (-)
AMCG00010364 inip,LOC107658659,LOC107558675,LOC107571239 other upstream 3371491 26367932 ~ 26379747 (-)
AMCG00010371 NA other upstream 3415769 26412210 ~ 26426658 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G249635 NA non-coding CI01000058 null 3584635 ~ 3584956 (+)
striped catfish (Pangasianodon hypophthalmus) G239455 LOC108436675,LOC108278439 non-coding NC_047609.1 CM018555.1 12210555 ~ 12215820 (+)