AMCG00018216 (telo2)


Basic Information

Item Value
gene id AMCG00018216
gene name telo2
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 4594933 ~ 4604105 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018216
ATGTTGTACAGATCGAGGTGGCTGCAGGGAGCAGGATCGTGTCAGTGGATGGAGACCCcgggcccagagctggaggtcCGCCTGACAGTGCGGCAGTGTGTCGGCGCCCTCTCCTCGCCCCGGGACGCCTCAGAGCTGACCCAGAGCCTCCGCACGCTGGGCAGCTACCTGGATGAGACCGGAGAGCGGTGCCCGGCCAGTGAGAGACAGGAGTTCGCCAGGGGGCACTACACCAGGGTCCTGCAGTTCTTGGTCAGTAACCTCCAGGCGGACTGGCAGCAGCTGCTGAGCCTTACCCAGCATGCCGAGCTGTGGGGGTCCTTGTTCCTGAGGGGGCCCCCAGACCAGGctctgctggtgctgctggacTGCGTGAGCTCCTCCAGGCCGAGCTCAGGGCTGGACCGGGTGCTGGACGTCTTGGAGCGCTTCCTGCAGGGCGGCCGTCTGAACGTGCTTCTGTGGGAGCGCTGTCAGGGCCCCCCGCCTCCAGAGTCCCCCCAGCTCCGGGAGGCCATCCTGGGGCGTCTGGTGTCCCTGCCCGACATCATGGCCAACTGCCTGCAGCACCAAAACCGCACGGCCTTCCTGCCACCCAGCTACTACCCCCTGCTGGCCCGAGAGATGAGCACGGCACTGGAGAAGACCTGCCAGGCCCTGAGAGggGGGCAGGACTGCTCTGTGACGTTCCTGGCGCAGCTCCTGGGGAAGACCTGTGTGCAAGGCCACAGCAAGCGCTTGTTGACGGAGCTGGTCCCTCGCCTCTCCTCCCTCACCCGGGCGGACATGGTGTGGCAGAGGGTGTGCTGGCGCCTGCTGGAGAGCGTGCCCGACCGCTGGATGGAGGCCGTGGTCACCGGGCTGGTGCAGGCGGTAGACGGGCCGGGGGCTCTGTCCAGGATCCTGGGCAACGTGGTGGTGAAGAATAAAAAGACCCAGTTCGTCCTGACGcacaagctgctgctgctgcagtacAAGTACAAGACGCCCGTGCTGCGGAGCCTGTTGGGGTACCTGTCTCAGGACACGGAGCGCCGTCCTCTGCTCATTCAGGTGCTGCGGGCGCTGTGCGAGGCGTGGTCGGGGGGCAGCGCGGTGCGTCACGCCCCCCTGGAGCAGCAGCTGTACCTGAGCCGAGCCCTGCTGCTGAGCGTGGGGCTGCTGTCGGACCCGGAGCTGCTCGGCCTGCGCGCTGAGCtgctgcagtgcatgctgggaggaATGCAGTGCCACctggacagcagtgtggagcgGGTGAGGCGGCTGGGCATGGTGGTGGGCGAGAGTCTGAGCACCAGGCTGGACCCTGAGGGCAGCCGCCTCCAATTCCAGTATGAACAGGATGCTGAGACGCGGGAGCTGCGGTCTCTGGTGTTCCCACCTCCTGCCAATCAACCTGTCTCTGAGGACACGCCTCCGACCGACAGGGCCGCTTCGCCCCAGAGTGGCCCCGGGACCGATCTGAAAGGGCGGGAGAAGACGGATCTCGAGCCAGTGGCACGCCTGACGTCCAAAGTGCCGCGGCCAATCGCAGACCAGCGCTCCGATTCTGAGCTGGACAGtgatgACGAGCTCCCCCCCTACGACATGTCTGCCGACCAGGAGCTGAGTGGGGCCCCCCCGCCCCGATACCTGCGCGACTGCCTGGAGGCCCTCGCCACCTCCGAGGACCCTGGGAAGATGGAGGTCAGTCTCCAGGCGGCTGAGGGACTAATCAGGAGGAACGCCGGGACCGTCGCAGAGGTGAGCGTCCAGCTGGTCAAGGTCCTGCTGCACCTGGAGGACAGGTACACCACGCCTGGCTTCCTGTGGCTGCGGCAGAGGAGCATGGTGGCCGTCACCGTGTCCGACCCGCTCCCGGTGACGGAGTTCCTGACGTCCGAGTTCTTCGCTCTGAACTACAGTCTCCGCCAGCGGCTGGACATCCTGGAGGTGCTGGCCCTCTCGGCGCAGGAGCTCTCCGAGCCGACGCCAGGAAAGGACCGTCCCTCTCCACGGATCCAGTCCATCGCCACCACGGCGCCCCTTGACCCCTGCGGCTCCTCCCCCCTGCACTGGAGGCGGGGAGCAACTCGGCCTGCTGTCAGTGCCGCCCCGAACCGCTTCGCCCCGGTCGCCGGGCACTTCTTCTTCCCTCTGCTGCGAAACTACGACAGGTATGGCAGACATCCCCCAGCACCGGGCAGCGCGCTGGCGCTTCCCAAATCTGGACCTGCGAGGAGGAAGAGAGTGTACAAGaaggaaaagacagacagacgagACCCGAGACGGCCCGGCTCAGGCGGCGTGAAGCCCCGTGCCCTTTCATTCATTCGCTTCCCTTTCTTCCAAAGCAGCCCCAGATTAGGATCTCCCTCTGATGTGCTGCCATGTGATTGTGCGCGACCGCTGAACACCTTTGACCTCCTGGGGAGCGATCACCTCGTCCTGGGCCGGCTGATCCACACGCTGGGGCTGCTCATGCACCTGGCGGTCAATGCCCCGGTGGCCACTCAGATGGGCCGTGCGCTGCTGGACTTCGTGTGGGCCGTGCGCTACCATGTGGACCCgGTGGTCCGGCAGGGGGTCctgttttcagtgtgtgctgtgtttctgAGCATGCCCAGTCGGCATCTACTGTCCGAGCTGAGCCATCACCTCCTGGAGACGAGAGCTTGGCTGGGggaCGTGGCAGAAGGGGACCCAGACGCAGACTGCCGCAGCCTGGCCACGCACAGTCTGCTGCTGCTCGAGAGCGGCCTGAAGAAGGAGCTGCGGCCCGAGACCCCGGCCCCGCGGCCCTGAGAGGCCTGGAGGTGGCCGGCAGGGCGGGAAGGAGCCGGCGTCCTGTGGGGGCTGGGCGGCCGGCCGGGAGCCGCTGCCAGGCGACGTGCGGCTGTCACTTCCGGAACAGTGTGTTCGGCCAGGGGAAGGAGGTGGGATGGCATCTCTGGGACATTAACACACACTCACCGGCGCAGTGggtgaaatatttatagacTTGGCAACCCGGAGGATGGGCCAAAAATACCTTAGGAATTTCACAAGGAAGGGgacttattttttataaacctttcttttctttcctgtgcTTGAAGATGGGCCGTACGTCTTTTTGGCGCAGGTGTTTTTGGTGGAAGTTGTGCACCTCCTTtggcagaaataaatgtgttttgcactACGTTGGTGCTTGCATGCTGTCCTGAGGGTTTCAACGGGAGTGATTTATCTGAGGGGTGCAACGGCTGGCAGTGCGGTACGTGCCGTCTCGCCCATCGGTGTGACTGGGGGCGTCTTATTGGGAGATCT
>TU144009
AGGGAGCAACTCGGCCTGCTGTCAGTGCCGCCCCGAACCGCTTCGCCCCGGTCGCCGGGCACTTCTTCTTCCCTCTGCTGCGAAACTACGACAGACCGCTGAACACCTTTGACCTCCTGGGGAGCGATCACCTCGTCCTGGGCCGGCTGATCCACACGCTGGGGCTGCTCATGCACCTGGCGGTCAATGCCCCGGTGGCCACTCAGATGGGCCGTGCGCTGCTGGACTTCGTGTGGGCCGTGCGCTACCATGTGGACCCgGTGGTCCGGCAGGGGGTCctgttttcagtgtgtgctgtgtttctgAGCATGCCCAGTCGGCATCTACTGTCCGAGCTGAGCCATCACCTCCTGGAGACGAGAGCTTGGCTGGGggaCGTGGCAGAAGGGGACCCAGACGCAGACTGCCGCAGCCTGGCCACGCACAGTCTGCTGCTGCTCGAGAGCGGCCTGAAGAAGGAGCTGCGGCCCGAGACCCCGGCCCCGCGGCCCTGAGAGGCCTGGAGGTGGCCGGCAGGGCGGGAAGGAGCCGGCGTCCTGTGGGGGCTGGGCGGCCGGCCGGGAGCCGCTGCCAGGCGACGTGCGGCTGTCACTTCCGGAACAGTGTGTTCGGCCAGGGGAAGGAGGTGGGATGGCATCTCTGGGACATTAACACACACTCACCGGCGCAGTGggtgaaatatttatagacTTGGCAACCCGGAGGATGGGCCAAAAATACCTTAGGAATTTCACAAGGAAGGGgacttattttttataaacctttcttttctttcctgtgcTTGAAGATGGGCCGTACGTCTTTTTGGCGCAGGTGTTTTTGGTGGAAGTTGTGCACCTCCTTtggcagaaataaatgtgttttgcactACGTTGGTGCTTG

Function

symbol description
telo2 Predicted to enable Hsp90 protein binding activity and telomeric DNA binding activity. Predicted to be involved in protein stabilization and telomere maintenance via telomerase. Predicted to be located in cytoplasm; membrane; and nucleus. Predicted to be part of ASTRA complex. Predicted to be active in cytosol. Orthologous to human TELO2 (telomere maintenance 2).

NR:

description
PREDICTED: telomere length regulation protein TEL2 homolog isoform X2

GO: NA

KEGG:

id description
K11137 TELO2, TEL2; telomere length regulation protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018216 True 3288 mRNA 0.65 22 4594933 4604105
TU144009 False 882 TUCP 0.61 5 4601490 4603989

Neighbor

gene id symbol gene type direction distance location
AMCG00018212 NA coding upstream 10021 4569833 ~ 4584912 (+)
AMCG00018213 decr2,LOC107677236,LOC107667207 coding upstream 65594 4526000 ~ 4529339 (+)
AMCG00018214 NA coding upstream 70595 4518463 ~ 4524338 (+)
AMCG00018211 xpo6,LOC106600647 coding upstream 79845 4494443 ~ 4515088 (+)
AMCG00018204 LOC104948217 coding upstream 246973 4342934 ~ 4347960 (+)
AMCG00018215 tmem204 coding downstream 6737 4610842 ~ 4620287 (+)
AMCG00018218 NA coding downstream 25295 4629400 ~ 4639869 (+)
AMCG00018217 NA coding downstream 37053 4641158 ~ 4646266 (+)
AMCG00018225 NA coding downstream 128043 4732148 ~ 4737892 (+)
AMCG00018224 NA coding downstream 143205 4747310 ~ 4748167 (+)
G114985 NA non-coding upstream 1088 4593460 ~ 4593845 (+)
G114984 NA non-coding upstream 4859 4589295 ~ 4590074 (+)
G114940 NA non-coding upstream 208044 4386180 ~ 4386889 (+)
G114888 NA non-coding upstream 293255 4298638 ~ 4301678 (+)
G114868 NA non-coding upstream 396883 4194277 ~ 4198050 (+)
G115061 NA non-coding downstream 209913 4814018 ~ 4814419 (+)
G115099 NA non-coding downstream 491043 5095148 ~ 5100938 (+)
G115188 NA non-coding downstream 712348 5316453 ~ 5317925 (+)
G115201 NA non-coding downstream 740382 5344487 ~ 5344947 (+)
G115331 LOC100136012 non-coding downstream 1441925 6046030 ~ 6046534 (+)
AMCG00018196 NA other upstream 401603 4186410 ~ 4193330 (+)
G114551 NA other upstream 1947159 2640846 ~ 2647774 (+)
G114518 NA other upstream 2025995 2491313 ~ 2568938 (+)
AMCG00018119 tfap4,LOC107661646,LOC107718566,LOC107553667 other upstream 2328158 2247853 ~ 2266775 (+)
AMCG00018106 NA other upstream 2612367 1979046 ~ 1982566 (+)
G115049 NA other downstream 157413 4761518 ~ 4763905 (+)
G115299 NA other downstream 1345358 5949463 ~ 5951017 (+)
AMCG00018272 NA other downstream 1551383 6155488 ~ 6160616 (+)
AMCG00018280 NA other downstream 2106377 6710482 ~ 6747438 (+)
G115590 fbxl16,LOC107685932,LOC107568165,LOC107738613,LOC107568127,LOC107690242 other downstream 3289522 7893627 ~ 7894449 (+)

Expression


Co-expression Network