G88232


Basic Information

Item Value
gene id G88232
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 28774871 ~ 28775193 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU110122
GGAAGAACATGCATCTGATATCAAAGGAATGCCATTTGGTAGTGATGAAAGATTGATGAAGTTGCCATCTGGAAGTAacattctttaaatgtattattcagtgTATCTTTACATATAATCCCTATACATGTTCTAGccatgttattttcttttttttaatcaaattattacaTGATTTACAGCTGTGATCTCTTCTTTACTACTTGAAGATCTTTTGGGGAGAATTTGTTGATTGCAAATTATGAAATGGATGTATTGGTTTGTCATGTACTGTTAGctgtacattaaaatgtgactttttgcaatataaaataaaaagctga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU110122 True 323 lncRNA 0.30 1 28774871 28775193

Neighbor

gene id symbol gene type direction distance location
AMCG00021762 NA coding upstream 264056 28510456 ~ 28510815 (+)
AMCG00021761 NA coding upstream 264836 28509629 ~ 28510035 (+)
AMCG00021763 NA coding upstream 265397 28506377 ~ 28509474 (+)
AMCG00021758 fam135b,LOC102788634 coding upstream 436351 28317272 ~ 28338520 (+)
AMCG00021753 NA coding upstream 561945 28206504 ~ 28212926 (+)
AMCG00021759 NA coding downstream 52793 28827986 ~ 28830377 (+)
AMCG00021764 NA coding downstream 216397 28991590 ~ 29005897 (+)
AMCG00021765 NA coding downstream 232203 29007396 ~ 29021741 (+)
AMCG00021766 cpsf1 coding downstream 250370 29025563 ~ 29041941 (+)
AMCG00021768 NA coding downstream 300908 29076101 ~ 29095261 (+)
G88225 NA non-coding upstream 76786 28697878 ~ 28698085 (+)
G88161 si:dkey-218f9.10,trappc9,LOC107669949 non-coding upstream 792744 27888558 ~ 27982127 (+)
G88150 NA non-coding upstream 1143217 27627052 ~ 27631654 (+)
G88151 NA non-coding upstream 1152991 27620356 ~ 27621880 (+)
G88145 NA non-coding upstream 1180301 27592630 ~ 27594570 (+)
G88237 NA non-coding downstream 55713 28830906 ~ 28831323 (+)
G88248 LOC101154678 non-coding downstream 127205 28902398 ~ 28902614 (+)
G88249 NA non-coding downstream 146436 28921629 ~ 28969948 (+)
G88306 NA non-coding downstream 503984 29279177 ~ 29280833 (+)
G88307 NA non-coding downstream 522644 29297837 ~ 29298080 (+)
AMCG00021745 NA other upstream 1137787 27632915 ~ 27637084 (+)
AMCG00021707 NA other upstream 2205723 26535093 ~ 26569148 (+)
AMCG00021703 galnt12 other upstream 2577795 26152068 ~ 26197076 (+)
AMCG00021693 NA other upstream 2904676 25843694 ~ 25870195 (+)
AMCG00021692 NA other upstream 3021618 25752357 ~ 25753253 (+)
G88238 NA other downstream 3122 28778315 ~ 28778733 (+)
G88276 NA other downstream 285694 29060887 ~ 29065339 (+)
AMCG00021772 NA other downstream 489634 29264827 ~ 29275347 (+)
AMCG00021779 LOC108438266,LOC105891906 other downstream 603382 29378575 ~ 29385325 (+)
AMCG00021803 clg22h6orf62,clg10h6orf62,c24h6orf62,LOC106515831,LOC101464686,LOC108240366,LOC104924567,LOC102228185,LOC103135136 other downstream 1492209 30267402 ~ 30407772 (+)

Expression


Co-expression Network