AMCG00021762


Basic Information

Item Value
gene id AMCG00021762
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 28510456 ~ 28510815 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021762
ATGAAAGTCGGAGTCCTGGATAAACTACCCATACCTGTTGTCCTAGGAAGAGATTTCCCAAAGTTTCAAGAGCTCAGGGAGCTGAAACAATCATCCTCACACCGGCCCAACACCTCTACTTCAGGGGGAATGCCAAAGCAGCAAGAACCACCTTCTGGCGTGCCTGATGCAGACGATGAAGGAGGAGAAGACCCCACACCCGAGAGAGAAGTTCCCTTGGTCATGACACAGCTGCCTCTACTACCGCTCACTGGACGCTGCAGGACAGTGCAACTGCAAAGACCCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021762 True 288 mRNA 0.52 2 28510456 28510815

Neighbor

gene id symbol gene type direction distance location
AMCG00021761 NA coding upstream 421 28509629 ~ 28510035 (+)
AMCG00021763 NA coding upstream 982 28506377 ~ 28509474 (+)
AMCG00021758 fam135b,LOC102788634 coding upstream 171936 28317272 ~ 28338520 (+)
AMCG00021753 NA coding upstream 297530 28206504 ~ 28212926 (+)
AMCG00021754 kcnk9,LOC107727349,LOC107669952 coding upstream 321295 28038878 ~ 28189161 (+)
AMCG00021760 NA coding downstream 256600 28767415 ~ 28804176 (+)
AMCG00021759 NA coding downstream 317171 28827986 ~ 28830377 (+)
AMCG00021764 NA coding downstream 480775 28991590 ~ 29005897 (+)
AMCG00021765 NA coding downstream 496581 29007396 ~ 29021741 (+)
AMCG00021766 cpsf1 coding downstream 514748 29025563 ~ 29041941 (+)
G88161 si:dkey-218f9.10,trappc9,LOC107669949 non-coding upstream 528329 27888558 ~ 27982127 (+)
G88150 NA non-coding upstream 878802 27627052 ~ 27631654 (+)
G88151 NA non-coding upstream 888576 27620356 ~ 27621880 (+)
G88145 NA non-coding upstream 915886 27592630 ~ 27594570 (+)
G88076 NA non-coding upstream 1100769 27408859 ~ 27409687 (+)
G88225 NA non-coding downstream 187063 28697878 ~ 28698085 (+)
G88232 NA non-coding downstream 264056 28774871 ~ 28775193 (+)
G88237 NA non-coding downstream 320091 28830906 ~ 28831323 (+)
G88248 LOC101154678 non-coding downstream 391583 28902398 ~ 28902614 (+)
G88249 NA non-coding downstream 410814 28921629 ~ 28969948 (+)
AMCG00021745 NA other upstream 873372 27632915 ~ 27637084 (+)
AMCG00021707 NA other upstream 1941308 26535093 ~ 26569148 (+)
AMCG00021703 galnt12 other upstream 2313380 26152068 ~ 26197076 (+)
AMCG00021693 NA other upstream 2640261 25843694 ~ 25870195 (+)
AMCG00021692 NA other upstream 2757203 25752357 ~ 25753253 (+)
G88238 NA other downstream 267500 28778315 ~ 28778733 (+)
G88276 NA other downstream 550072 29060887 ~ 29065339 (+)
AMCG00021772 NA other downstream 754012 29264827 ~ 29275347 (+)
AMCG00021779 LOC108438266,LOC105891906 other downstream 867760 29378575 ~ 29385325 (+)
AMCG00021803 clg22h6orf62,clg10h6orf62,c24h6orf62,LOC106515831,LOC101464686,LOC108240366,LOC104924567,LOC102228185,LOC103135136 other downstream 1756587 30267402 ~ 30407772 (+)

Expression


Co-expression Network