AMCG00021761


Basic Information

Item Value
gene id AMCG00021761
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 28509629 ~ 28510035 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021761
ATGGCTGCATATCCGACACTAACGGCCGAACTACTCAGTTGGCTGTGGGAAACCATGGCAGTGCAGGCACAATGACCGCTATCTCCGCTGCCATATGACATGAAGAGGACCGTCAGCCAAGGCAAGCCCAAGAACACAGACAAACTACTGAAATTGGTCGAGCAACACCAGGTGACCACTGAACTGCTCCATAGTTGGAAAGCCGACAAACCCGTTCCCAAGATCACCTGGAAAGGACCCGAGATAGAGAGGAGAAGCTGGAGTGTGTTGCCTCGATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021761 True 279 mRNA 0.52 2 28509629 28510035

Neighbor

gene id symbol gene type direction distance location
AMCG00021763 NA coding upstream 155 28506377 ~ 28509474 (+)
AMCG00021758 fam135b,LOC102788634 coding upstream 171109 28317272 ~ 28338520 (+)
AMCG00021753 NA coding upstream 296703 28206504 ~ 28212926 (+)
AMCG00021754 kcnk9,LOC107727349,LOC107669952 coding upstream 320468 28038878 ~ 28189161 (+)
AMCG00021752 kcnk9,LOC106588605,LOC106570237 coding upstream 475967 27980965 ~ 28033662 (+)
AMCG00021762 NA coding downstream 421 28510456 ~ 28510815 (+)
AMCG00021760 NA coding downstream 257380 28767415 ~ 28804176 (+)
AMCG00021759 NA coding downstream 317951 28827986 ~ 28830377 (+)
AMCG00021764 NA coding downstream 481555 28991590 ~ 29005897 (+)
AMCG00021765 NA coding downstream 497361 29007396 ~ 29021741 (+)
G88161 si:dkey-218f9.10,trappc9,LOC107669949 non-coding upstream 527502 27888558 ~ 27982127 (+)
G88150 NA non-coding upstream 877975 27627052 ~ 27631654 (+)
G88151 NA non-coding upstream 887749 27620356 ~ 27621880 (+)
G88145 NA non-coding upstream 915059 27592630 ~ 27594570 (+)
G88076 NA non-coding upstream 1099942 27408859 ~ 27409687 (+)
G88225 NA non-coding downstream 187843 28697878 ~ 28698085 (+)
G88232 NA non-coding downstream 264836 28774871 ~ 28775193 (+)
G88237 NA non-coding downstream 320871 28830906 ~ 28831323 (+)
G88248 LOC101154678 non-coding downstream 392363 28902398 ~ 28902614 (+)
G88249 NA non-coding downstream 411594 28921629 ~ 28969948 (+)
AMCG00021745 NA other upstream 872545 27632915 ~ 27637084 (+)
AMCG00021707 NA other upstream 1940481 26535093 ~ 26569148 (+)
AMCG00021703 galnt12 other upstream 2312553 26152068 ~ 26197076 (+)
AMCG00021693 NA other upstream 2639434 25843694 ~ 25870195 (+)
AMCG00021692 NA other upstream 2756376 25752357 ~ 25753253 (+)
G88238 NA other downstream 268280 28778315 ~ 28778733 (+)
G88276 NA other downstream 550852 29060887 ~ 29065339 (+)
AMCG00021772 NA other downstream 754792 29264827 ~ 29275347 (+)
AMCG00021779 LOC108438266,LOC105891906 other downstream 868540 29378575 ~ 29385325 (+)
AMCG00021803 clg22h6orf62,clg10h6orf62,c24h6orf62,LOC106515831,LOC101464686,LOC108240366,LOC104924567,LOC102228185,LOC103135136 other downstream 1757367 30267402 ~ 30407772 (+)

Expression


Co-expression Network