XLOC_006418 (CABZ01061524.1)


Basic Information

Item Value
gene id XLOC_006418
gene name CABZ01061524.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 6960782 ~ 7031033 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012438
GATGGTCCACCTCCAGTCCCACGAGCTCCTGGAGCACCAATGGACATCAAAATCCATGACGCTAACAGAGATTATGTCATCGTGTCCTGGAAACCTCCTAACACCACCACTGAAGGCCCTATCATTGGATATTTTGTTGACAGATGTGAAGTTGGAACAGAAAACTGGGTGCAGTGTAACGACTCTCCTGTTAAGATCTGCAAATATCCTGTGCAGGGCCTGTTTGAAGGACACTCTTATTATTTTCGCGTACGTGCTGTCAACTCGCATGGTATCGGCAAACCATCCAGAATGTCTGAGCCCATTGCTGCTCTGGACCCCACAGAGTTCGAAAGACTACATGGTAAACTTGACGTTGTGACTTACTATGATGACCTTGAAGCTGAGGGAAAAGCTCCAGGACCTCCCTCTAAAGTCTGCGCTTCAGAGACCGACCGAACATATGTTGTGCTCACATGGTCCTCTCAATGCTCAATATTGTGTTTTGCTGGCTCTGTCGGAGCAGGATCTTGGCAGAGAGTGAACACTAAAGTGCCCATCAGATCCCCTCGCTATGCTGTCTTCGACCTGTCTGAAGGAAAGGACTATCTCTTCCGTGTTCTGTCTGCTAATATATATGGCATCAGTGAACCCTCGGAGCCCACCAGCACTATAACTACCTTGCAACTAAAGGGTGTGCCCTCGGCTCCCGGACAAGTCGTCGCAACCAGGGAAACAGACACCTCTGTTCTAATCCAGTGGGCTCCTCCGAAGGATCCCAATAACCTGATTGGATATTACATCGATTCTTGTGTCAAAGGTTCTAAGGACTGGGCATCGGCTAATCACAAGCCCCATAAGCACACAAGGTTTGTTGTGCATGGCCTGACCACCGGTGAGTCGTATGTTTTCCGCGTACAAGCCATCAACGAGCTGGGCCTCAGTGACGAATCCCAGGAATCAGCCCCTCTTTCTGTGAGAGCTTCTCACCAAACACAGTCTCTTTTGATATTCCATCAACTGTTTATTCGATACATTTTTCCTTTTTTGCCCTCTTCCCCTTATGACATCTCTCTTCTGTATTGTGACGGGGAATCCATGGTGCTCAACTGGAAGCAGCCCATCCATTCTGGAGGAGCAGAGGTCACCGATTATTACATTGACAAATGCAACGTGGCCAAGAAGACGTGGAAGGAGGTCAACATCCCGCCTGTTAAGGAAAGACTGCACAAGGTTGGAGGTCTGACTGCTGGCTCAGTGTATCAGTTTAGGGTCTATGGTGCTAATGTGGTTGGAGTTGGTGATCCCTCGACCGCTAGCCCTTCCTTCAGATGTGACGCTTGGACCATGTCTGAACCCGGTAATGTGAAgattaaaatattacaaaacgttcgaggttacagaagtaacccttcgttccccgaggaggggaacggaagtgctataagtggatggAATCCacgatgggaggattcggatcagaagccgcttacctggagacgtaagcttgcgcaggtgtgcgacatctcacacctgaagctagCAAACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggggaacgaaggTATCTCTTTAGTCATTTGCACCTCTTATCAAATAATGCAAATTCCTCTCTGCTTCTGTTTTTATGAAGGCATCCAGGAAATCCAGTGTGGCGTCGATGAGCAATCAGGTGACATTTACCTCTCTTTTGAGAGCTGCCAAATGATGGAGAAATCAAAGTTTGTGTGGAAAAAGTCCTACCAAGAAATCACTGACTTCTCAAAGGGAATAGCCGTCAAGACATCAGGCAGCAACTCGACTTTGCTTTTCAAGAACCCAGACAAAGAGGATTTGGGCACATTCTCTGTGTCTGTTACACATACTGATGGTGTGTCCTTGTCTCTGTCACCATTTGTAGAGCTGGAGAAGATGTTGGCCATAAGCTATGACATACGCAATCCAATTATTCCTCTGAAGACTGAGCTGGCCTATAAGATTCTAGAGAGAGGCCGTATGCGCTTTTGGCTGCAAGCTGAGGGCATCTCCTCATCTGTGACCTACAAATTCTTTGCCAATAACAAGGAGCTTGTCAACTGCGAGGTAAAGGACTCTACAGGCATTATTGAGATGGTGATGGATCATTTCACTGACGACAGCGAGGGCACTTTCACCGTGCAGATCCAAGATGGCAGAGCCAAGGCCCAGTCCTCTCTCGTGCTTATCGGAGATGCCTTCAAGGCAGCGTTGGCTGAGGCAGACTACCAAAGGAGGGAGTACATTCGTGTAAAAGAGGGCCCTCACTTTACCGAGTTCCTCTCTGTTCAAATTGGGGACAATGCCTCTGTCACTCTTATTTGCAAGGTGGCCAATTTGAAGAAGGAGTCTGCGTTCCATTGGTATAAGGACGATGTAGAGGTGATTCCCGAGGTGCCTGCTGACTTGACCTCAGGAGTCTGCAAGTTCCCTCTAACTAATTTCTCCAAGAACGATGTAGGACTTTATAAAGCAACCATCACTGATGACAGAGGCCAAGATGTGTCACAGATCGATGTTTCTGGATCCAGTGCCTCCGAGTTGTCGATTCAGTGCACTGCGGAGGGCATTATGCTTCAGTGCCATATGAAATATTACACAGAGGAGATGAAGATCCATTGGAAACAAAAGGAAGCTAAAATCAGTGCATCAGAAAGAATGCGAATTGGTGGCAACCCAGCAATGGCAACCCTGGAAGTAGTCGAACCTACTGATAAAGATAAAGGCATGTACACGTTTGAGATTGTGGATGCTGAGAAAACCCACACTCGTACCCTGGATCTTTCTGGACAACGTGAGTTGTTTGAATATCGTGGCAAAGTGGTTGGCGGTCTTCCTGATGTTGTGACTATCATGGAAAAGAAGACTCTGAGTCTGACCTGCACTGTCTGCGGTGATCCCAAACCTCAGGTCAGCTGGTCTAAGAACGATCAAGAAGTAGAGCCCAGCGATCAGTACGTCATTGCCTTGGACTCTGGAAAGTTTGCCAGCCTCACTATCAAAGGGGTGTCCATGGAGGACTCTGGCAAGTATACCATGACCGTGCAAAACAGGTTCGGCGGTGAAACAGTGGACATCATCGTCAGCGTGTACAAACATGGAGACAAGATTCCAGACATCAAACCGACCCCTTCCTCCAAGAGGATCTTCGAAAGAAGTTTGGGCTTAGATTTTGgtttaatgtataaataa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000110698

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012438 True 3282 mRNA 0.46 28 6960782 7031033

Neighbor

gene id symbol gene type direction distance location
XLOC_006417 NA coding downstream 622124 6335364 ~ 6338658 (-)
XLOC_006416 mcph1 coding downstream 636771 6286594 ~ 6324011 (-)
XLOC_006415 agpat5 coding downstream 681098 6259392 ~ 6279684 (-)
XLOC_006414 tuba4l coding downstream 708268 6245219 ~ 6252514 (-)
XLOC_006413 si:zfos-1056e6.1 coding downstream 742534 6208365 ~ 6218248 (-)
XLOC_006419 NA coding upstream 123289 7154322 ~ 7154837 (-)
XLOC_006420 ninl coding upstream 140033 7171066 ~ 7233811 (-)
XLOC_006421 NA coding upstream 238179 7269212 ~ 7322676 (-)
XLOC_006422 NA coding upstream 274382 7305415 ~ 7316939 (-)
XLOC_006423 si:dkey-45k15.1 coding upstream 337961 7368994 ~ 7432715 (-)
XLOC_006338 rn7sk misc downstream 6134557 825904 ~ 826225 (-)
XLOC_006471 BX537274.2 misc upstream 3233708 10264741 ~ 10264905 (-)
XLOC_006411 NA non-coding downstream 773038 6150221 ~ 6187744 (-)
XLOC_006412 CU984583.1 non-coding downstream 799218 6160581 ~ 6161564 (-)
XLOC_006406 NA non-coding downstream 1228285 5730915 ~ 5732497 (-)
XLOC_006405 CR926469.1 non-coding downstream 1336367 5579097 ~ 5624415 (-)
XLOC_006426 NA non-coding upstream 716078 7747111 ~ 7749201 (-)
XLOC_006428 NA non-coding upstream 1137680 8168713 ~ 8230165 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000005_01250101_01298320 MYOM2 coding CI01000005 null 1248838 ~ 1298320 (-)